RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 SMIM2Q9BVW6 85 aa9.21□□□□□ -0.94
NIF3L1-205ENST00000409588 LAMTOR2Q9Y2Q5 125 aa9.21□□□□□ -0.94
NIF3L1-205ENST00000409588 PRSS47A8MTI9 375 aa9.2□□□□□ -0.94
NIF3L1-205ENST00000409588 F8WDY8 70 aa9.2□□□□□ -0.94
NIF3L1-205ENST00000409588 RAB5AP20339 215 aa9.2□□□□□ -0.94
NIF3L1-205ENST00000409588 MRPS36P82909 103 aaKnown RBP9.2□□□□□ -0.94
NIF3L1-205ENST00000409588 MAJINQ3KP22 176 aa9.2□□□□□ -0.94
NIF3L1-205ENST00000409588 TMEM136Q6ZRR5 245 aa9.2□□□□□ -0.94
NIF3L1-205ENST00000409588 CARD19Q96LW7 228 aa9.2□□□□□ -0.94
NIF3L1-205ENST00000409588 TRAV13-1A0A0B4J241 112 aa9.19□□□□□ -0.94
NIF3L1-205ENST00000409588 CHTF8P0CG12 524 aa9.19□□□□□ -0.94
NIF3L1-205ENST00000409588 C2orf48Q96LS8 159 aa9.19□□□□□ -0.94
NIF3L1-205ENST00000409588 IGLV4-69A0A075B6H9 119 aa9.18□□□□□ -0.94
NIF3L1-205ENST00000409588 STPG4Q8N801 248 aa9.18□□□□□ -0.94
NIF3L1-205ENST00000409588 IGKV2-24A0A0C4DH68 120 aa9.17□□□□□ -0.94
NIF3L1-205ENST00000409588 NPYP01303 97 aa9.17□□□□□ -0.94
NIF3L1-205ENST00000409588 RNF151Q2KHN1 245 aa9.17□□□□□ -0.94
NIF3L1-205ENST00000409588 OR10D4PQ8NGN7 298 aa9.17□□□□□ -0.94
NIF3L1-205ENST00000409588 PRELID3AQ96N28 172 aa9.17□□□□□ -0.94
NIF3L1-205ENST00000409588 PYGO1Q9Y3Y4 419 aa9.17□□□□□ -0.94
NIF3L1-205ENST00000409588 LOC107984640A0A0U1RRK4 108 aa9.16□□□□□ -0.94
NIF3L1-205ENST00000409588 K7EMI3 77 aa9.16□□□□□ -0.94
NIF3L1-205ENST00000409588 IMMP2LQ96T52 175 aa9.16□□□□□ -0.94
NIF3L1-205ENST00000409588 A0A096LNI7 61 aa9.15□□□□□ -0.94
NIF3L1-205ENST00000409588 IFI27P40305 119 aaPredicted RBP9.15□□□□□ -0.94
NIF3L1-205ENST00000409588 RPL39P62891 51 aaKnown RBP9.15□□□□□ -0.94
NIF3L1-205ENST00000409588 CLLU1Q5K131 121 aa9.15□□□□□ -0.94
NIF3L1-205ENST00000409588 Q6ZUT4 128 aa9.15□□□□□ -0.94
NIF3L1-205ENST00000409588 CAMK2N2Q96S95 79 aa9.15□□□□□ -0.94
NIF3L1-205ENST00000409588 IGHV3OR16-9A0A0B4J2B5 98 aa9.14□□□□□ -0.95
NIF3L1-205ENST00000409588 NPSP0C0P6 89 aa9.14□□□□□ -0.95
NIF3L1-205ENST00000409588 G0S2P27469 103 aa9.14□□□□□ -0.95
NIF3L1-205ENST00000409588 LINC00526Q96FQ7 95 aa9.14□□□□□ -0.95
NIF3L1-205ENST00000409588 MAP1LC3AQ9H492 121 aa9.14□□□□□ -0.95
NIF3L1-205ENST00000409588 HNRNPA3P51991 378 aaKnown RBP9.13□□□□□ -0.95
NIF3L1-205ENST00000409588 PTTG1IPP53801 180 aa9.13□□□□□ -0.95
NIF3L1-205ENST00000409588 RNASE13Q5GAN3 156 aaKnown RBP9.13□□□□□ -0.95
NIF3L1-205ENST00000409588 UQCC3Q6UW78 93 aa9.13□□□□□ -0.95
NIF3L1-205ENST00000409588 C5orf38Q86SI9 138 aa9.13□□□□□ -0.95
NIF3L1-205ENST00000409588 ORMDL2Q53FV1 153 aa9.12□□□□□ -0.95
NIF3L1-205ENST00000409588 FAM104AQ969W3 186 aa9.12□□□□□ -0.95
NIF3L1-205ENST00000409588 LRP1Q07954 4544 aaKnown RBP9.11□□□□□ -0.95
NIF3L1-205ENST00000409588 TGIF2-C20orf24A0A0A6YYL0 155 aa9.11□□□□□ -0.95
NIF3L1-205ENST00000409588 IFITM10A6NMD0 228 aa9.11□□□□□ -0.95
NIF3L1-205ENST00000409588 Q8N8P6 123 aa9.11□□□□□ -0.95
NIF3L1-205ENST00000409588 KRTAP4-11Q9BYQ6 195 aa9.11□□□□□ -0.95
NIF3L1-205ENST00000409588 CTDSP1Q9GZU7 261 aa9.11□□□□□ -0.95
NIF3L1-205ENST00000409588 MRPL35Q9NZE8 188 aaKnown RBP9.11□□□□□ -0.95
NIF3L1-205ENST00000409588 TRAV9-1A0A075B6T8 112 aa9.1□□□□□ -0.95
NIF3L1-205ENST00000409588 SPAG11BQ08648 103 aa9.1□□□□□ -0.95
NIF3L1-205ENST00000409588 Q6ZRP5 223 aa9.1□□□□□ -0.95
NIF3L1-205ENST00000409588 LINC01561Q8N1V8 128 aa9.1□□□□□ -0.95
NIF3L1-205ENST00000409588 TMEM141Q96I45 108 aa9.1□□□□□ -0.95
NIF3L1-205ENST00000409588 NXT2Q9NPJ8 142 aaKnown RBP9.1□□□□□ -0.95
NIF3L1-205ENST00000409588 A0A087WZ39 114 aa9.09□□□□□ -0.95
NIF3L1-205ENST00000409588 NDUFA1O15239 70 aa9.09□□□□□ -0.95
NIF3L1-205ENST00000409588 PRR3P79522 188 aaKnown RBP9.09□□□□□ -0.95
NIF3L1-205ENST00000409588 GAGE2BQ13066 116 aa9.09□□□□□ -0.95
NIF3L1-205ENST00000409588 PAPPA-AS1Q5QFB9 102 aa9.09□□□□□ -0.95
NIF3L1-205ENST00000409588 SPINK6Q6UWN8 80 aa9.09□□□□□ -0.95
NIF3L1-205ENST00000409588 TEX43Q6ZNM6 134 aa9.09□□□□□ -0.95
NIF3L1-205ENST00000409588 OPRPNQ99935 248 aaPredicted RBP9.09□□□□□ -0.95
NIF3L1-205ENST00000409588 C2orf88Q9BSF0 95 aa9.09□□□□□ -0.95
NIF3L1-205ENST00000409588 CYSLTR1Q9Y271 337 aa9.09□□□□□ -0.95
NIF3L1-205ENST00000409588 LOC389332A0A1B0GUA5 103 aa9.08□□□□□ -0.96
NIF3L1-205ENST00000409588 Q6ZN92 141 aa9.08□□□□□ -0.96
NIF3L1-205ENST00000409588 ORAOV1Q8WV07 137 aa9.08□□□□□ -0.96
NIF3L1-205ENST00000409588 FAT3Q8TDW7 4589 aa9.07□□□□□ -0.96
NIF3L1-205ENST00000409588 IGLV4-3A0A075B6K6 122 aa9.07□□□□□ -0.96
NIF3L1-205ENST00000409588 TMEM218A2RU14 115 aa9.07□□□□□ -0.96
NIF3L1-205ENST00000409588 LINC01549A6NIU2 74 aa9.07□□□□□ -0.96
NIF3L1-205ENST00000409588 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.07□□□□□ -0.96
NIF3L1-205ENST00000409588 TLX1NBP0CAT3 122 aa9.07□□□□□ -0.96
NIF3L1-205ENST00000409588 LINC00242Q5T6M2 205 aa9.07□□□□□ -0.96
NIF3L1-205ENST00000409588 C2orf66Q6UXQ4 117 aa9.07□□□□□ -0.96
NIF3L1-205ENST00000409588 VCX2Q9H322 139 aa9.07□□□□□ -0.96
NIF3L1-205ENST00000409588 PKHD1L1Q86WI1 4243 aa9.07□□□□□ -0.96
NIF3L1-205ENST00000409588 SEC11AP67812 179 aa9.06□□□□□ -0.96
NIF3L1-205ENST00000409588 COX19Q49B96 90 aa9.05□□□□□ -0.96
NIF3L1-205ENST00000409588 REG3GQ6UW15 175 aa9.05□□□□□ -0.96
NIF3L1-205ENST00000409588 LINC01600Q96MT4 127 aa9.05□□□□□ -0.96
NIF3L1-205ENST00000409588 AMELXQ99217 191 aa9.05□□□□□ -0.96
NIF3L1-205ENST00000409588 SEC11CQ9BY50 192 aa9.05□□□□□ -0.96
NIF3L1-205ENST00000409588 TRBV30A0A0K0K1B3 111 aa9.04□□□□□ -0.96
NIF3L1-205ENST00000409588 S100PP25815 95 aa9.04□□□□□ -0.96
NIF3L1-205ENST00000409588 UBE2D1P51668 147 aa9.04□□□□□ -0.96
NIF3L1-205ENST00000409588 RPL18AQ02543 176 aaKnown RBP9.04□□□□□ -0.96
NIF3L1-205ENST00000409588 SRSF9Q13242 221 aaKnown RBP eCLIP9.04□□□□□ -0.96
NIF3L1-205ENST00000409588 FAM19A3Q7Z5A8 133 aa9.04□□□□□ -0.96
NIF3L1-205ENST00000409588 IGIPA6NJ69 53 aa9.03□□□□□ -0.96
NIF3L1-205ENST00000409588 KRTAP9-7A8MTY7 169 aa9.03□□□□□ -0.96
NIF3L1-205ENST00000409588 MT1HL1P0DM35 61 aa9.03□□□□□ -0.96
NIF3L1-205ENST00000409588 C9orf116Q5BN46 136 aaPredicted RBP9.03□□□□□ -0.96
NIF3L1-205ENST00000409588 A0A1W2PNN7 141 aa9.02□□□□□ -0.97
NIF3L1-205ENST00000409588 KIAA0087Q14695 138 aa9.02□□□□□ -0.97
NIF3L1-205ENST00000409588 TIMM17AQ99595 171 aa9.02□□□□□ -0.97
NIF3L1-205ENST00000409588 GNB1LQ9BYB4 327 aa9.02□□□□□ -0.97
NIF3L1-205ENST00000409588 PLA2G2DQ9UNK4 145 aa9.02□□□□□ -0.97
NIF3L1-205ENST00000409588 HERVK_113P63121 156 aa9.01□□□□□ -0.97
NIF3L1-205ENST00000409588 UNQ6190/PRO20217Q6UXQ8 127 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 214.8 ms