RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 TRBV10-2A0A0K0K1G8 114 aa6.03□□□□□ -1.44
SNX13-201ENST00000409076 WFDC9Q8NEX5 89 aa6.03□□□□□ -1.44
SNX13-201ENST00000409076 UBE2D4Q9Y2X8 147 aa6.03□□□□□ -1.44
SNX13-201ENST00000409076 MIAQ16674 131 aa6.02□□□□□ -1.45
SNX13-201ENST00000409076 DAZ2Q13117 558 aaKnown RBP6.02□□□□□ -1.45
SNX13-201ENST00000409076 SDIM1Q6ZPB5 146 aa6.02□□□□□ -1.45
SNX13-201ENST00000409076 DAZ4Q86SG3 579 aaKnown RBP6.02□□□□□ -1.45
SNX13-201ENST00000409076 AMELXQ99217 191 aa6.02□□□□□ -1.45
SNX13-201ENST00000409076 DAZ3Q9NR90 486 aaKnown RBP6.02□□□□□ -1.45
SNX13-201ENST00000409076 CHCHD7Q9BUK0 85 aa6.02□□□□□ -1.45
SNX13-201ENST00000409076 LINC01546A6NGU7 62 aa6.01□□□□□ -1.45
SNX13-201ENST00000409076 ZNF702PQ9H963 129 aa6.01□□□□□ -1.45
SNX13-201ENST00000409076 LECT2O14960 151 aa6.01□□□□□ -1.45
SNX13-201ENST00000409076 LINC00308Q8TCZ7 52 aa6.01□□□□□ -1.45
SNX13-201ENST00000409076 LINC00482Q8N8I6 264 aa6.01□□□□□ -1.45
SNX13-201ENST00000409076 SMR3AQ99954 134 aa6.01□□□□□ -1.45
SNX13-201ENST00000409076 K7EMT4 169 aa6□□□□□ -1.45
SNX13-201ENST00000409076 NCR3O14931 201 aa6□□□□□ -1.45
SNX13-201ENST00000409076 BAHCC1Q9P281 2608 aa6□□□□□ -1.45
SNX13-201ENST00000409076 A0A087WVE0 104 aa6□□□□□ -1.45
SNX13-201ENST00000409076 CCL24O00175 119 aa6□□□□□ -1.45
SNX13-201ENST00000409076 PF4P02776 101 aa6□□□□□ -1.45
SNX13-201ENST00000409076 C9orf153Q5TBE3 101 aa6□□□□□ -1.45
SNX13-201ENST00000409076 SND1-IT1Q9HBX3 110 aa6□□□□□ -1.45
SNX13-201ENST00000409076 MGAM2Q2M2H8 2515 aa6□□□□□ -1.45
SNX13-201ENST00000409076 MAST4O15021 2626 aa6□□□□□ -1.45
SNX13-201ENST00000409076 MED14OSP0DP75 135 aa6□□□□□ -1.45
SNX13-201ENST00000409076 ATP6V0E2Q8NHE4 81 aa6□□□□□ -1.45
SNX13-201ENST00000409076 TMEM243Q9BU79 118 aa6□□□□□ -1.45
SNX13-201ENST00000409076 NHLRC4P0CG21 123 aaPredicted RBP5.99□□□□□ -1.45
SNX13-201ENST00000409076 LINC00242Q5T6M2 205 aa5.99□□□□□ -1.45
SNX13-201ENST00000409076 SOSTDC1Q6X4U4 206 aa5.99□□□□□ -1.45
SNX13-201ENST00000409076 Q8N3U1 123 aa5.99□□□□□ -1.45
SNX13-201ENST00000409076 A8MTW9 85 aa5.99□□□□□ -1.45
SNX13-201ENST00000409076 ODF3L2Q3SX64 289 aa5.99□□□□□ -1.45
SNX13-201ENST00000409076 C9orf116Q5BN46 136 aaPredicted RBP5.99□□□□□ -1.45
SNX13-201ENST00000409076 FAM19A4Q96LR4 140 aa5.99□□□□□ -1.45
SNX13-201ENST00000409076 IGLV4-60A0A075B6I1 120 aa5.99□□□□□ -1.45
SNX13-201ENST00000409076 A0A0B4J2C4 111 aa5.99□□□□□ -1.45
SNX13-201ENST00000409076 H3BUA1 57 aa5.99□□□□□ -1.45
SNX13-201ENST00000409076 K7EQD1 137 aa5.98□□□□□ -1.45
SNX13-201ENST00000409076 DEFB114Q30KQ6 69 aa5.98□□□□□ -1.45
SNX13-201ENST00000409076 ODF3Q96PU9 254 aa5.98□□□□□ -1.45
SNX13-201ENST00000409076 TRBV6-5A0A0K0K1A5 114 aa5.98□□□□□ -1.45
SNX13-201ENST00000409076 FAM218AQ96MZ4 157 aa5.98□□□□□ -1.45
SNX13-201ENST00000409076 IGHV4-31P0DP07 118 aa5.97□□□□□ -1.45
SNX13-201ENST00000409076 RPL32P62910 135 aaKnown RBP5.97□□□□□ -1.45
SNX13-201ENST00000409076 VWFP04275 2813 aa5.97□□□□□ -1.45
SNX13-201ENST00000409076 HERVK_113P63121 156 aa5.97□□□□□ -1.45
SNX13-201ENST00000409076 MRPS36P82909 103 aaKnown RBP5.97□□□□□ -1.45
SNX13-201ENST00000409076 BBC3Q96PG8 261 aaPredicted RBP5.97□□□□□ -1.45
SNX13-201ENST00000409076 SPANXA1Q9NS26 97 aa5.97□□□□□ -1.45
SNX13-201ENST00000409076 GYPEP15421 78 aa5.97□□□□□ -1.45
SNX13-201ENST00000409076 MALP21145 153 aa5.97□□□□□ -1.45
SNX13-201ENST00000409076 NTM-AS1Q6ZSK4 140 aa5.97□□□□□ -1.45
SNX13-201ENST00000409076 C1orf158Q8N1D5 194 aa5.97□□□□□ -1.45
SNX13-201ENST00000409076 ANGP03950 147 aaKnown RBP5.96□□□□□ -1.45
SNX13-201ENST00000409076 A0A087WYN8 130 aa5.96□□□□□ -1.46
SNX13-201ENST00000409076 CR1P17927 2039 aa5.96□□□□□ -1.46
SNX13-201ENST00000409076 TMEM89A2RUT3 159 aa5.96□□□□□ -1.46
SNX13-201ENST00000409076 COL6A5A8TX70 2615 aa5.96□□□□□ -1.46
SNX13-201ENST00000409076 DNAJC9-AS1A6NH13 148 aa5.95□□□□□ -1.46
SNX13-201ENST00000409076 SMIM1B2RUZ4 78 aa5.95□□□□□ -1.46
SNX13-201ENST00000409076 LST1O00453 97 aa5.95□□□□□ -1.46
SNX13-201ENST00000409076 DEFB135Q30KP9 77 aa5.95□□□□□ -1.46
SNX13-201ENST00000409076 TRBV30A0A0K0K1B3 111 aa5.95□□□□□ -1.46
SNX13-201ENST00000409076 COX7B2Q8TF08 81 aa5.95□□□□□ -1.46
SNX13-201ENST00000409076 DNAJC30Q96LL9 226 aa5.95□□□□□ -1.46
SNX13-201ENST00000409076 LITAFQ99732 161 aa5.95□□□□□ -1.46
SNX13-201ENST00000409076 SCXQ7RTU7 201 aa5.95□□□□□ -1.46
SNX13-201ENST00000409076 TIRAPP58753 221 aa5.94□□□□□ -1.46
SNX13-201ENST00000409076 C9orf129Q5T035 196 aaKnown RBP5.94□□□□□ -1.46
SNX13-201ENST00000409076 Q6YL49 198 aa5.94□□□□□ -1.46
SNX13-201ENST00000409076 CITED1Q99966 193 aa5.94□□□□□ -1.46
SNX13-201ENST00000409076 ZNF469Q96JG9 3925 aaPredicted RBP5.94□□□□□ -1.46
SNX13-201ENST00000409076 LOC107984640A0A0U1RRK4 108 aa5.94□□□□□ -1.46
SNX13-201ENST00000409076 CFAP161Q6P656 301 aa5.94□□□□□ -1.46
SNX13-201ENST00000409076 PRORYQ9H606 182 aa5.94□□□□□ -1.46
SNX13-201ENST00000409076 STAB1Q9NY15 2570 aa5.94□□□□□ -1.46
SNX13-201ENST00000409076 F5H768 121 aa5.94□□□□□ -1.46
SNX13-201ENST00000409076 PRB2P02812 416 aaPredicted RBP5.94□□□□□ -1.46
SNX13-201ENST00000409076 S100A7L2Q5SY68 101 aa5.94□□□□□ -1.46
SNX13-201ENST00000409076 LINC00269Q8N2A0 174 aa5.94□□□□□ -1.46
SNX13-201ENST00000409076 LAMTOR3Q9UHA4 124 aa5.94□□□□□ -1.46
SNX13-201ENST00000409076 AKAP9Q99996 3911 aa5.93□□□□□ -1.46
SNX13-201ENST00000409076 hADV29S1A0JD25 119 aa5.93□□□□□ -1.46
SNX13-201ENST00000409076 LINC00337Q8N6G1 96 aa5.93□□□□□ -1.46
SNX13-201ENST00000409076 COX7A2LO14548 114 aa5.93□□□□□ -1.46
SNX13-201ENST00000409076 SMIM11BQ8TCY0 68 aa5.93□□□□□ -1.46
SNX13-201ENST00000409076 FAM104AQ969W3 186 aa5.93□□□□□ -1.46
SNX13-201ENST00000409076 NDUFA1O15239 70 aa5.92□□□□□ -1.46
SNX13-201ENST00000409076 HAMPP81172 84 aa5.92□□□□□ -1.46
SNX13-201ENST00000409076 TRAV23DV6A0A075B6W5 121 aa5.92□□□□□ -1.46
SNX13-201ENST00000409076 C11orf72Q8NBR9 251 aa5.92□□□□□ -1.46
SNX13-201ENST00000409076 XAGE1AQ9HD64 81 aa5.92□□□□□ -1.46
SNX13-201ENST00000409076 A0A1B0GX51 115 aa5.92□□□□□ -1.46
SNX13-201ENST00000409076 SMCR5Q8TEV8 140 aa5.92□□□□□ -1.46
SNX13-201ENST00000409076 DEFB113Q30KQ7 82 aa5.91□□□□□ -1.46
SNX13-201ENST00000409076 H3BT86 120 aa5.91□□□□□ -1.46
SNX13-201ENST00000409076 CCL18P55774 89 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms