RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 Q6ZN92 141 aa5.74□□□□□ -1.49
SNORD88A-201ENST00000408314 C2orf88Q9BSF0 95 aa5.74□□□□□ -1.49
SNORD88A-201ENST00000408314 PYGO1Q9Y3Y4 419 aa5.74□□□□□ -1.49
SNORD88A-201ENST00000408314 PKHD1L1Q86WI1 4243 aa5.73□□□□□ -1.49
SNORD88A-201ENST00000408314 NDUFA1O15239 70 aa5.73□□□□□ -1.49
SNORD88A-201ENST00000408314 NPSP0C0P6 89 aa5.73□□□□□ -1.49
SNORD88A-201ENST00000408314 PTTG1IPP53801 180 aa5.73□□□□□ -1.49
SNORD88A-201ENST00000408314 RPL39P62891 51 aaKnown RBP5.73□□□□□ -1.49
SNORD88A-201ENST00000408314 ORMDL2Q53FV1 153 aa5.73□□□□□ -1.49
SNORD88A-201ENST00000408314 CLLU1Q5K131 121 aa5.73□□□□□ -1.49
SNORD88A-201ENST00000408314 PAPPA-AS1Q5QFB9 102 aa5.73□□□□□ -1.49
SNORD88A-201ENST00000408314 UQCC3Q6UW78 93 aa5.73□□□□□ -1.49
SNORD88A-201ENST00000408314 TEX43Q6ZNM6 134 aa5.73□□□□□ -1.49
SNORD88A-201ENST00000408314 C5orf38Q86SI9 138 aa5.73□□□□□ -1.49
SNORD88A-201ENST00000408314 ORAOV1Q8WV07 137 aa5.73□□□□□ -1.49
SNORD88A-201ENST00000408314 LINC00526Q96FQ7 95 aa5.73□□□□□ -1.49
SNORD88A-201ENST00000408314 IMMP2LQ96T52 175 aa5.73□□□□□ -1.49
SNORD88A-201ENST00000408314 CYSLTR1Q9Y271 337 aa5.73□□□□□ -1.49
SNORD88A-201ENST00000408314 FAT3Q8TDW7 4589 aa5.73□□□□□ -1.49
SNORD88A-201ENST00000408314 TRAV9-1A0A075B6T8 112 aa5.72□□□□□ -1.49
SNORD88A-201ENST00000408314 PRSS47A8MTI9 375 aa5.72□□□□□ -1.49
SNORD88A-201ENST00000408314 PRR3P79522 188 aaKnown RBP5.72□□□□□ -1.49
SNORD88A-201ENST00000408314 GAGE2BQ13066 116 aa5.72□□□□□ -1.49
SNORD88A-201ENST00000408314 TMEM141Q96I45 108 aa5.72□□□□□ -1.49
SNORD88A-201ENST00000408314 CTDSP1Q9GZU7 261 aa5.72□□□□□ -1.49
SNORD88A-201ENST00000408314 NXT2Q9NPJ8 142 aaKnown RBP5.72□□□□□ -1.49
SNORD88A-201ENST00000408314 IGHV3OR16-9A0A0B4J2B5 98 aa5.71□□□□□ -1.5
SNORD88A-201ENST00000408314 HNRNPA3P51991 378 aaKnown RBP5.71□□□□□ -1.5
SNORD88A-201ENST00000408314 RPL18AQ02543 176 aaKnown RBP5.71□□□□□ -1.5
SNORD88A-201ENST00000408314 Q6ZRP5 223 aa5.71□□□□□ -1.5
SNORD88A-201ENST00000408314 Q8N8P6 123 aa5.71□□□□□ -1.5
SNORD88A-201ENST00000408314 MRPL35Q9NZE8 188 aaKnown RBP5.71□□□□□ -1.5
SNORD88A-201ENST00000408314 LRP1Q07954 4544 aaKnown RBP5.7□□□□□ -1.5
SNORD88A-201ENST00000408314 LOC389332A0A1B0GUA5 103 aa5.7□□□□□ -1.5
SNORD88A-201ENST00000408314 LINC01549A6NIU2 74 aa5.7□□□□□ -1.5
SNORD88A-201ENST00000408314 S100PP25815 95 aa5.7□□□□□ -1.5
SNORD88A-201ENST00000408314 SEC11AP67812 179 aa5.7□□□□□ -1.5
SNORD88A-201ENST00000408314 REG3GQ6UW15 175 aa5.7□□□□□ -1.5
SNORD88A-201ENST00000408314 LINC01561Q8N1V8 128 aa5.7□□□□□ -1.5
SNORD88A-201ENST00000408314 IGLV4-3A0A075B6K6 122 aa5.69□□□□□ -1.5
SNORD88A-201ENST00000408314 A0A087WZ39 114 aa5.69□□□□□ -1.5
SNORD88A-201ENST00000408314 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.69□□□□□ -1.5
SNORD88A-201ENST00000408314 COX19Q49B96 90 aa5.69□□□□□ -1.5
SNORD88A-201ENST00000408314 SPINK6Q6UWN8 80 aa5.69□□□□□ -1.5
SNORD88A-201ENST00000408314 C2orf66Q6UXQ4 117 aa5.69□□□□□ -1.5
SNORD88A-201ENST00000408314 VCX2Q9H322 139 aa5.69□□□□□ -1.5
SNORD88A-201ENST00000408314 PLA2G2DQ9UNK4 145 aa5.69□□□□□ -1.5
SNORD88A-201ENST00000408314 TRBV30A0A0K0K1B3 111 aa5.68□□□□□ -1.5
SNORD88A-201ENST00000408314 TLX1NBP0CAT3 122 aa5.68□□□□□ -1.5
SNORD88A-201ENST00000408314 PACRGQ96M98 296 aaPredicted RBP5.68□□□□□ -1.5
SNORD88A-201ENST00000408314 OPRPNQ99935 248 aaPredicted RBP5.68□□□□□ -1.5
SNORD88A-201ENST00000408314 HMCN2Q8NDA2 5059 aa5.68□□□□□ -1.5
SNORD88A-201ENST00000408314 TMEM218A2RU14 115 aa5.67□□□□□ -1.5
SNORD88A-201ENST00000408314 PRSS2P07478 247 aa5.67□□□□□ -1.5
SNORD88A-201ENST00000408314 C9orf116Q5BN46 136 aaPredicted RBP5.67□□□□□ -1.5
SNORD88A-201ENST00000408314 LINC00242Q5T6M2 205 aa5.67□□□□□ -1.5
SNORD88A-201ENST00000408314 FAM104AQ969W3 186 aa5.67□□□□□ -1.5
SNORD88A-201ENST00000408314 TIMM17AQ99595 171 aa5.67□□□□□ -1.5
SNORD88A-201ENST00000408314 SEC11CQ9BY50 192 aa5.67□□□□□ -1.5
SNORD88A-201ENST00000408314 MT-ND6P03923 174 aa5.66□□□□□ -1.5
SNORD88A-201ENST00000408314 UBE2D1P51668 147 aa5.66□□□□□ -1.5
SNORD88A-201ENST00000408314 HERVK_113P63121 156 aa5.66□□□□□ -1.5
SNORD88A-201ENST00000408314 AMELXQ99217 191 aa5.66□□□□□ -1.5
SNORD88A-201ENST00000408314 CKS1BP61024 79 aa5.65□□□□□ -1.5
SNORD88A-201ENST00000408314 LINC01600Q96MT4 127 aa5.65□□□□□ -1.5
SNORD88A-201ENST00000408314 GEMIN7Q9H840 131 aaKnown RBP5.65□□□□□ -1.5
SNORD88A-201ENST00000408314 A0A0J9YXV3 536 aa5.64□□□□□ -1.51
SNORD88A-201ENST00000408314 IGIPA6NJ69 53 aa5.64□□□□□ -1.51
SNORD88A-201ENST00000408314 NDUFC2-KCTD14E9PQ53 114 aa5.64□□□□□ -1.51
SNORD88A-201ENST00000408314 MT1HL1P0DM35 61 aa5.64□□□□□ -1.51
SNORD88A-201ENST00000408314 ADCYAP1P18509 176 aa5.64□□□□□ -1.51
SNORD88A-201ENST00000408314 CXCL5P42830 114 aa5.64□□□□□ -1.51
SNORD88A-201ENST00000408314 RHEBQ15382 184 aa5.64□□□□□ -1.51
SNORD88A-201ENST00000408314 UNQ6190/PRO20217Q6UXQ8 127 aa5.64□□□□□ -1.51
SNORD88A-201ENST00000408314 FAM19A3Q7Z5A8 133 aa5.64□□□□□ -1.51
SNORD88A-201ENST00000408314 Q8IZM0 81 aa5.64□□□□□ -1.51
SNORD88A-201ENST00000408314 TOMM6Q96B49 74 aa5.64□□□□□ -1.51
SNORD88A-201ENST00000408314 GNB1LQ9BYB4 327 aa5.64□□□□□ -1.51
SNORD88A-201ENST00000408314 C6orf48Q9UBA6 75 aa5.64□□□□□ -1.51
SNORD88A-201ENST00000408314 A0A1W2PNN7 141 aa5.63□□□□□ -1.51
SNORD88A-201ENST00000408314 KIAA0087Q14695 138 aa5.63□□□□□ -1.51
SNORD88A-201ENST00000408314 GAGE2EQ4V326 116 aa5.63□□□□□ -1.51
SNORD88A-201ENST00000408314 C6orf226Q5I0X4 101 aa5.63□□□□□ -1.51
SNORD88A-201ENST00000408314 ERASQ7Z444 233 aa5.63□□□□□ -1.51
SNORD88A-201ENST00000408314 COMMD7Q86VX2 200 aa5.63□□□□□ -1.51
SNORD88A-201ENST00000408314 SCGB3A1Q96QR1 104 aa5.63□□□□□ -1.51
SNORD88A-201ENST00000408314 SMCO4Q9NRQ5 59 aa5.63□□□□□ -1.51
SNORD88A-201ENST00000408314 GAGE2DQ9UEU5 116 aa5.63□□□□□ -1.51
SNORD88A-201ENST00000408314 C1orf137Q5JT78 98 aa5.62□□□□□ -1.51
SNORD88A-201ENST00000408314 C10orf25Q5T742 122 aa5.62□□□□□ -1.51
SNORD88A-201ENST00000408314 LINC00173Q6ZV60 143 aa5.62□□□□□ -1.51
SNORD88A-201ENST00000408314 FA2HQ7L5A8 372 aa5.62□□□□□ -1.51
SNORD88A-201ENST00000408314 DIRC1Q969H9 104 aa5.62□□□□□ -1.51
SNORD88A-201ENST00000408314 ALKBH7Q9BT30 221 aaPredicted RBP5.62□□□□□ -1.51
SNORD88A-201ENST00000408314 TOMM7Q9P0U1 55 aa5.62□□□□□ -1.51
SNORD88A-201ENST00000408314 PSORS1C2Q9UIG4 136 aa5.62□□□□□ -1.51
SNORD88A-201ENST00000408314 F8VRH5 84 aa5.61□□□□□ -1.51
SNORD88A-201ENST00000408314 M0QXV9 152 aa5.61□□□□□ -1.51
SNORD88A-201ENST00000408314 UBE2BP63146 152 aa5.61□□□□□ -1.51
SNORD88A-201ENST00000408314 SRSF9Q13242 221 aaKnown RBP eCLIP5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms