RNA–Protein interactions for RNA: ENST00000405546.7

ATG4B-206, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2 BASIC

Gene ATG4B, Length 3,294 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-206ENST00000405546 ODF3L2Q3SX64 289 aa10.82□□□□□ -0.68
ATG4B-206ENST00000405546 PIK3CD-AS1Q5SR53 167 aa10.82□□□□□ -0.68
ATG4B-206ENST00000405546 Q6ZTI0 123 aa10.82□□□□□ -0.68
ATG4B-206ENST00000405546 FAM104AQ969W3 186 aa10.82□□□□□ -0.68
ATG4B-206ENST00000405546 FSHBP01225 129 aa10.82□□□□□ -0.68
ATG4B-206ENST00000405546 CR1P17927 2039 aa10.81□□□□□ -0.68
ATG4B-206ENST00000405546 A0A087WVE0 104 aa10.81□□□□□ -0.68
ATG4B-206ENST00000405546 CSDC2Q9Y534 153 aaKnown RBP10.81□□□□□ -0.68
ATG4B-206ENST00000405546 COX6A2Q02221 97 aa10.81□□□□□ -0.68
ATG4B-206ENST00000405546 GCN1Q92616 2671 aaKnown RBP10.81□□□□□ -0.68
ATG4B-206ENST00000405546 C3orf22Q8N5N4 141 aa10.8□□□□□ -0.68
ATG4B-206ENST00000405546 FAM218AQ96MZ4 157 aa10.8□□□□□ -0.68
ATG4B-206ENST00000405546 ZNF469Q96JG9 3925 aaPredicted RBP10.8□□□□□ -0.68
ATG4B-206ENST00000405546 KIR2DL5BQ8NHK3 375 aa10.8□□□□□ -0.68
ATG4B-206ENST00000405546 SETXQ7Z333 2677 aaKnown RBP10.8□□□□□ -0.68
ATG4B-206ENST00000405546 FAM19A5Q7Z5A7 132 aaPredicted RBP10.8□□□□□ -0.68
ATG4B-206ENST00000405546 RNF152Q8N8N0 203 aa10.79□□□□□ -0.68
ATG4B-206ENST00000405546 CHCHD7Q9BUK0 85 aa10.79□□□□□ -0.68
ATG4B-206ENST00000405546 TMEM126AQ9H061 195 aa10.79□□□□□ -0.68
ATG4B-206ENST00000405546 UBE2D4Q9Y2X8 147 aa10.79□□□□□ -0.68
ATG4B-206ENST00000405546 TIRAPP58753 221 aa10.79□□□□□ -0.68
ATG4B-206ENST00000405546 RPL36AP83881 106 aaKnown RBP10.79□□□□□ -0.68
ATG4B-206ENST00000405546 RPL36ALQ969Q0 106 aaKnown RBP10.79□□□□□ -0.68
ATG4B-206ENST00000405546 TRBV7-7A0A0K0K1E9 115 aa10.78□□□□□ -0.68
ATG4B-206ENST00000405546 PLA2G2AP14555 144 aa10.78□□□□□ -0.68
ATG4B-206ENST00000405546 SOSTDC1Q6X4U4 206 aa10.78□□□□□ -0.68
ATG4B-206ENST00000405546 MRPS36P82909 103 aaKnown RBP10.78□□□□□ -0.68
ATG4B-206ENST00000405546 C9orf129Q5T035 196 aaKnown RBP10.78□□□□□ -0.68
ATG4B-206ENST00000405546 C11orf72Q8NBR9 251 aa10.78□□□□□ -0.68
ATG4B-206ENST00000405546 ESM1Q9NQ30 184 aa10.78□□□□□ -0.68
ATG4B-206ENST00000405546 UBE2L6O14933 153 aa10.77□□□□□ -0.68
ATG4B-206ENST00000405546 SPANXA1Q9NS26 97 aa10.77□□□□□ -0.68
ATG4B-206ENST00000405546 C1orf158Q8N1D5 194 aa10.77□□□□□ -0.69
ATG4B-206ENST00000405546 LINC00308Q8TCZ7 52 aa10.77□□□□□ -0.69
ATG4B-206ENST00000405546 PYGO1Q9Y3Y4 419 aa10.77□□□□□ -0.69
ATG4B-206ENST00000405546 ATP5G1P05496 136 aa10.76□□□□□ -0.69
ATG4B-206ENST00000405546 TOMM7Q9P0U1 55 aa10.76□□□□□ -0.69
ATG4B-206ENST00000405546 PRIMA1Q86XR5 153 aa10.76□□□□□ -0.69
ATG4B-206ENST00000405546 SPANXDQ9BXN6 97 aa10.76□□□□□ -0.69
ATG4B-206ENST00000405546 C14orf132Q9NPU4 83 aa10.76□□□□□ -0.69
ATG4B-206ENST00000405546 SPANXCQ9NY87 97 aa10.76□□□□□ -0.69
ATG4B-206ENST00000405546 DSCR8Q96T75 97 aa10.76□□□□□ -0.69
ATG4B-206ENST00000405546 NBPF19A0A087WUL8 3843 aa10.75□□□□□ -0.69
ATG4B-206ENST00000405546 TINCRA0A1B0GVN0 87 aa10.75□□□□□ -0.69
ATG4B-206ENST00000405546 TRGV4A0A0C4DH28 118 aa10.75□□□□□ -0.69
ATG4B-206ENST00000405546 CIRBPQ14011 172 aaKnown RBP10.75□□□□□ -0.69
ATG4B-206ENST00000405546 UQCRQO14949 82 aa10.74□□□□□ -0.69
ATG4B-206ENST00000405546 FAM240AA0A1B0GVK7 77 aa10.73□□□□□ -0.69
ATG4B-206ENST00000405546 SLPIP03973 132 aa10.73□□□□□ -0.69
ATG4B-206ENST00000405546 DEFB130BP0DP73 79 aa10.73□□□□□ -0.69
ATG4B-206ENST00000405546 DEFB130AP0DP74 79 aa10.73□□□□□ -0.69
ATG4B-206ENST00000405546 LINC00643Q86TS7 51 aa10.73□□□□□ -0.69
ATG4B-206ENST00000405546 LOC100131303A0A0U1RQF7 123 aa10.73□□□□□ -0.69
ATG4B-206ENST00000405546 A0A1B0GX51 115 aa10.73□□□□□ -0.69
ATG4B-206ENST00000405546 COX7A2LO14548 114 aa10.73□□□□□ -0.69
ATG4B-206ENST00000405546 WFDC9Q8NEX5 89 aa10.73□□□□□ -0.69
ATG4B-206ENST00000405546 DNAJC30Q96LL9 226 aa10.73□□□□□ -0.69
ATG4B-206ENST00000405546 LRRC75A-AS1Q8N1F1 130 aa10.73□□□□□ -0.69
ATG4B-206ENST00000405546 LINC01006Q8NI28 216 aa10.72□□□□□ -0.69
ATG4B-206ENST00000405546 C11orf68Q9H3H3 251 aaKnown RBP10.71□□□□□ -0.69
ATG4B-206ENST00000405546 K7EQD1 137 aa10.71□□□□□ -0.69
ATG4B-206ENST00000405546 SMIM9A6NGZ8 99 aa10.71□□□□□ -0.7
ATG4B-206ENST00000405546 HIST1H4AP62805 103 aaKnown RBP10.71□□□□□ -0.7
ATG4B-206ENST00000405546 LINC00526Q96FQ7 95 aa10.7□□□□□ -0.7
ATG4B-206ENST00000405546 TENM4Q6N022 2769 aa10.7□□□□□ -0.7
ATG4B-206ENST00000405546 RNASE1P07998 156 aaKnown RBP10.69□□□□□ -0.7
ATG4B-206ENST00000405546 UNC79Q9P2D8 2635 aa10.69□□□□□ -0.7
ATG4B-206ENST00000405546 DNAL4O96015 105 aa10.69□□□□□ -0.7
ATG4B-206ENST00000405546 COX7CP15954 63 aa10.69□□□□□ -0.7
ATG4B-206ENST00000405546 BEAN1Q3B7T3 259 aa10.69□□□□□ -0.7
ATG4B-206ENST00000405546 DEFB121Q5J5C9 76 aa10.69□□□□□ -0.7
ATG4B-206ENST00000405546 KRTAP1-3Q8IUG1 177 aa10.69□□□□□ -0.7
ATG4B-206ENST00000405546 SMR3AQ99954 134 aa10.69□□□□□ -0.7
ATG4B-206ENST00000405546 J3KT08 172 aa10.69□□□□□ -0.7
ATG4B-206ENST00000405546 NCR3O14931 201 aa10.68□□□□□ -0.7
ATG4B-206ENST00000405546 A0A096LPF7 62 aa10.68□□□□□ -0.7
ATG4B-206ENST00000405546 LINC00242Q5T6M2 205 aa10.68□□□□□ -0.7
ATG4B-206ENST00000405546 C22orf24Q9Y442 160 aa10.68□□□□□ -0.7
ATG4B-206ENST00000405546 A0A087WYN8 130 aa10.68□□□□□ -0.7
ATG4B-206ENST00000405546 PF4P02776 101 aa10.68□□□□□ -0.7
ATG4B-206ENST00000405546 TRAV25A0A0B4J276 109 aa10.67□□□□□ -0.7
ATG4B-206ENST00000405546 NTM-AS1Q6ZSK4 140 aa10.67□□□□□ -0.7
ATG4B-206ENST00000405546 OR13C6PQ8NH95 151 aa10.67□□□□□ -0.7
ATG4B-206ENST00000405546 C4orf26Q17RF5 130 aa10.67□□□□□ -0.7
ATG4B-206ENST00000405546 TMEM243Q9BU79 118 aa10.67□□□□□ -0.7
ATG4B-206ENST00000405546 TMEM86BQ8N661 226 aa10.66□□□□□ -0.7
ATG4B-206ENST00000405546 A8MTW9 85 aa10.66□□□□□ -0.7
ATG4B-206ENST00000405546 NDUFA1O15239 70 aa10.66□□□□□ -0.7
ATG4B-206ENST00000405546 ATRQ13535 2644 aa10.66□□□□□ -0.7
ATG4B-206ENST00000405546 TRACP01848 142 aa10.66□□□□□ -0.7
ATG4B-206ENST00000405546 PFN2P35080 140 aa10.66□□□□□ -0.7
ATG4B-206ENST00000405546 HILS1P60008 231 aa10.66□□□□□ -0.7
ATG4B-206ENST00000405546 HRCT1Q6UXD1 115 aa10.66□□□□□ -0.7
ATG4B-206ENST00000405546 ACYP1P07311 99 aa10.65□□□□□ -0.7
ATG4B-206ENST00000405546 MALP21145 153 aa10.65□□□□□ -0.7
ATG4B-206ENST00000405546 LINC00846Q9NV44 126 aa10.65□□□□□ -0.7
ATG4B-206ENST00000405546 C2orf48Q96LS8 159 aa10.65□□□□□ -0.7
ATG4B-206ENST00000405546 C5orf47Q569G3 176 aa10.64□□□□□ -0.71
ATG4B-206ENST00000405546 MIR7-3HGQ8N6C7 128 aa10.64□□□□□ -0.71
ATG4B-206ENST00000405546 LINC01600Q96MT4 127 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms