RNA–Protein interactions for RNA: ENST00000404321.3

PTPRN2-204, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 5 BASIC

Gene PTPRN2, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-204ENST00000404321 C10orf91Q5T1B1 145 aa11.54□□□□□ -0.56
PTPRN2-204ENST00000404321 IGLV4-3A0A075B6K6 122 aa11.54□□□□□ -0.56
PTPRN2-204ENST00000404321 C2orf66Q6UXQ4 117 aa11.54□□□□□ -0.56
PTPRN2-204ENST00000404321 RPS10P5Q9NQ39 176 aa11.54□□□□□ -0.56
PTPRN2-204ENST00000404321 CARHSP1Q9Y2V2 147 aaKnown RBP11.54□□□□□ -0.56
PTPRN2-204ENST00000404321 HERC1Q15751 4861 aa11.53□□□□□ -0.56
PTPRN2-204ENST00000404321 A0A096LNI7 61 aa11.53□□□□□ -0.56
PTPRN2-204ENST00000404321 CYSLTR1Q9Y271 337 aa11.53□□□□□ -0.56
PTPRN2-204ENST00000404321 PYGO1Q9Y3Y4 419 aa11.53□□□□□ -0.56
PTPRN2-204ENST00000404321 ORMDL2Q53FV1 153 aa11.52□□□□□ -0.57
PTPRN2-204ENST00000404321 ZC2HC1BQ5TFG8 222 aa11.52□□□□□ -0.57
PTPRN2-204ENST00000404321 Q6ZRU5 148 aa11.52□□□□□ -0.57
PTPRN2-204ENST00000404321 TMEM141Q96I45 108 aa11.52□□□□□ -0.57
PTPRN2-204ENST00000404321 NXT2Q9NPJ8 142 aaKnown RBP11.52□□□□□ -0.57
PTPRN2-204ENST00000404321 IGHV3OR16-9A0A0B4J2B5 98 aa11.51□□□□□ -0.57
PTPRN2-204ENST00000404321 SPAG11BQ08648 103 aa11.51□□□□□ -0.57
PTPRN2-204ENST00000404321 RHEBQ15382 184 aa11.51□□□□□ -0.57
PTPRN2-204ENST00000404321 CAMK2N2Q96S95 79 aa11.51□□□□□ -0.57
PTPRN2-204ENST00000404321 DMBT1Q9UGM3 2413 aaPredicted RBP11.51□□□□□ -0.57
PTPRN2-204ENST00000404321 APOMO95445 188 aa11.5□□□□□ -0.57
PTPRN2-204ENST00000404321 ORAOV1Q8WV07 137 aa11.5□□□□□ -0.57
PTPRN2-204ENST00000404321 LINC00242Q5T6M2 205 aa11.49□□□□□ -0.57
PTPRN2-204ENST00000404321 TEX43Q6ZNM6 134 aa11.49□□□□□ -0.57
PTPRN2-204ENST00000404321 STPG4Q8N801 248 aa11.49□□□□□ -0.57
PTPRN2-204ENST00000404321 GNB1LQ9BYB4 327 aa11.49□□□□□ -0.57
PTPRN2-204ENST00000404321 PLAC8Q9NZF1 115 aa11.49□□□□□ -0.57
PTPRN2-204ENST00000404321 Q6ZN92 141 aa11.48□□□□□ -0.57
PTPRN2-204ENST00000404321 TGIF2-C20orf24A0A0A6YYL0 155 aa11.47□□□□□ -0.57
PTPRN2-204ENST00000404321 A0A0J9YXV3 536 aa11.47□□□□□ -0.57
PTPRN2-204ENST00000404321 K7EMI3 77 aa11.47□□□□□ -0.57
PTPRN2-204ENST00000404321 APOC3P02656 99 aa11.47□□□□□ -0.57
PTPRN2-204ENST00000404321 GAGE2BQ13066 116 aa11.47□□□□□ -0.57
PTPRN2-204ENST00000404321 ALKBH7Q9BT30 221 aaPredicted RBP11.47□□□□□ -0.57
PTPRN2-204ENST00000404321 MRPL18Q9H0U6 180 aaKnown RBP11.47□□□□□ -0.57
PTPRN2-204ENST00000404321 VCX2Q9H322 139 aa11.47□□□□□ -0.57
PTPRN2-204ENST00000404321 IGIPA6NJ69 53 aa11.46□□□□□ -0.57
PTPRN2-204ENST00000404321 UBE2D1P51668 147 aa11.46□□□□□ -0.57
PTPRN2-204ENST00000404321 HNRNPA3P51991 378 aaKnown RBP11.46□□□□□ -0.57
PTPRN2-204ENST00000404321 FABP9Q0Z7S8 132 aa11.46□□□□□ -0.57
PTPRN2-204ENST00000404321 LINC00173Q6ZV60 143 aa11.46□□□□□ -0.57
PTPRN2-204ENST00000404321 OR10D4PQ8NGN7 298 aa11.46□□□□□ -0.57
PTPRN2-204ENST00000404321 C2orf48Q96LS8 159 aa11.46□□□□□ -0.57
PTPRN2-204ENST00000404321 C2orf88Q9BSF0 95 aa11.46□□□□□ -0.57
PTPRN2-204ENST00000404321 LOC107984640A0A0U1RRK4 108 aa11.44□□□□□ -0.58
PTPRN2-204ENST00000404321 J3QL48 77 aa11.44□□□□□ -0.58
PTPRN2-204ENST00000404321 LINC00474Q9P2X8 69 aa11.44□□□□□ -0.58
PTPRN2-204ENST00000404321 PKIGQ9Y2B9 76 aa11.44□□□□□ -0.58
PTPRN2-204ENST00000404321 PTTG1IPP53801 180 aa11.43□□□□□ -0.58
PTPRN2-204ENST00000404321 COX19Q49B96 90 aa11.43□□□□□ -0.58
PTPRN2-204ENST00000404321 TOMM6Q96B49 74 aa11.43□□□□□ -0.58
PTPRN2-204ENST00000404321 AMELXQ99217 191 aa11.43□□□□□ -0.58
PTPRN2-204ENST00000404321 A0A087WZ39 114 aa11.42□□□□□ -0.58
PTPRN2-204ENST00000404321 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.42□□□□□ -0.58
PTPRN2-204ENST00000404321 MT-ND6P03923 174 aa11.42□□□□□ -0.58
PTPRN2-204ENST00000404321 RPL18AQ02543 176 aaKnown RBP11.42□□□□□ -0.58
PTPRN2-204ENST00000404321 C10orf25Q5T742 122 aa11.42□□□□□ -0.58
PTPRN2-204ENST00000404321 C7orf33Q8WU49 177 aa11.42□□□□□ -0.58
PTPRN2-204ENST00000404321 UNQ6190/PRO20217Q6UXQ8 127 aa11.41□□□□□ -0.58
PTPRN2-204ENST00000404321 NDUFA1O15239 70 aa11.41□□□□□ -0.58
PTPRN2-204ENST00000404321 G0S2P27469 103 aa11.41□□□□□ -0.58
PTPRN2-204ENST00000404321 SVBPQ8N300 66 aa11.41□□□□□ -0.58
PTPRN2-204ENST00000404321 SCGB3A1Q96QR1 104 aa11.41□□□□□ -0.58
PTPRN2-204ENST00000404321 LRP1Q07954 4544 aaKnown RBP11.4□□□□□ -0.58
PTPRN2-204ENST00000404321 SNAPINO95295 136 aa11.4□□□□□ -0.59
PTPRN2-204ENST00000404321 NPSP0C0P6 89 aa11.4□□□□□ -0.59
PTPRN2-204ENST00000404321 FA2HQ7L5A8 372 aa11.4□□□□□ -0.59
PTPRN2-204ENST00000404321 TIMM17AQ99595 171 aa11.4□□□□□ -0.59
PTPRN2-204ENST00000404321 TRAPPC1Q9Y5R8 145 aa11.4□□□□□ -0.59
PTPRN2-204ENST00000404321 KRTAP29-1A8MX34 341 aaPredicted RBP11.39□□□□□ -0.59
PTPRN2-204ENST00000404321 PAPPA-AS1Q5QFB9 102 aa11.39□□□□□ -0.59
PTPRN2-204ENST00000404321 MRPL35Q9NZE8 188 aaKnown RBP11.39□□□□□ -0.59
PTPRN2-204ENST00000404321 KIAA0087Q14695 138 aa11.38□□□□□ -0.59
PTPRN2-204ENST00000404321 C2orf82Q6UX34 121 aa11.38□□□□□ -0.59
PTPRN2-204ENST00000404321 ERASQ7Z444 233 aa11.38□□□□□ -0.59
PTPRN2-204ENST00000404321 SMCO4Q9NRQ5 59 aa11.38□□□□□ -0.59
PTPRN2-204ENST00000404321 C6orf48Q9UBA6 75 aa11.38□□□□□ -0.59
PTPRN2-204ENST00000404321 A0A1W2PNN7 141 aa11.37□□□□□ -0.59
PTPRN2-204ENST00000404321 LINC01546A6NGU7 62 aa11.37□□□□□ -0.59
PTPRN2-204ENST00000404321 RNF151Q2KHN1 245 aa11.37□□□□□ -0.59
PTPRN2-204ENST00000404321 TOMM7Q9P0U1 55 aa11.36□□□□□ -0.59
PTPRN2-204ENST00000404321 CDKN2A-AS1Q9UH64 79 aa11.36□□□□□ -0.59
PTPRN2-204ENST00000404321 F8WDY8 70 aa11.35□□□□□ -0.59
PTPRN2-204ENST00000404321 PRR3P79522 188 aaKnown RBP11.35□□□□□ -0.59
PTPRN2-204ENST00000404321 C9orf116Q5BN46 136 aaPredicted RBP11.35□□□□□ -0.59
PTPRN2-204ENST00000404321 GEMIN7Q9H840 131 aaKnown RBP11.35□□□□□ -0.59
PTPRN2-204ENST00000404321 HERVK_113P63121 156 aa11.34□□□□□ -0.59
PTPRN2-204ENST00000404321 FAM19A3Q7Z5A8 133 aa11.34□□□□□ -0.59
PTPRN2-204ENST00000404321 FAT3Q8TDW7 4589 aa11.34□□□□□ -0.59
PTPRN2-204ENST00000404321 PRSS2P07478 247 aa11.33□□□□□ -0.6
PTPRN2-204ENST00000404321 GAGE2EQ4V326 116 aa11.33□□□□□ -0.6
PTPRN2-204ENST00000404321 Q6ZRP5 223 aa11.33□□□□□ -0.6
PTPRN2-204ENST00000404321 LINC01561Q8N1V8 128 aa11.33□□□□□ -0.6
PTPRN2-204ENST00000404321 C18orf32Q8TCD1 76 aa11.33□□□□□ -0.6
PTPRN2-204ENST00000404321 URB1-AS1Q96HZ7 61 aa11.33□□□□□ -0.6
PTPRN2-204ENST00000404321 GAGE2DQ9UEU5 116 aa11.33□□□□□ -0.6
PTPRN2-204ENST00000404321 SEC11AP67812 179 aa11.32□□□□□ -0.6
PTPRN2-204ENST00000404321 LINC00469Q8N7U9 141 aa11.32□□□□□ -0.6
PTPRN2-204ENST00000404321 PACRGQ96M98 296 aaPredicted RBP11.32□□□□□ -0.6
PTPRN2-204ENST00000404321 OXTP01178 125 aa11.31□□□□□ -0.6
PTPRN2-204ENST00000404321 PMCHL1Q16048 86 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms