RNA–Protein interactions for RNA: ENST00000400183.6

USP25-204, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best) BASIC

Gene USP25, Length 5,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-204ENST00000400183 CNFNQ9BYD5 112 aa13.53□□□□□ -0.24
USP25-204ENST00000400183 PPDPFQ9H3Y8 114 aa13.53□□□□□ -0.24
USP25-204ENST00000400183 PRM2P04554 102 aa13.53□□□□□ -0.24
USP25-204ENST00000400183 NDUFA7O95182 113 aa13.53□□□□□ -0.24
USP25-204ENST00000400183 UBE2D3P61077 147 aa13.53□□□□□ -0.24
USP25-204ENST00000400183 UBE2D2P62837 147 aa13.53□□□□□ -0.24
USP25-204ENST00000400183 LOC107984640A0A0U1RRK4 108 aa13.52□□□□□ -0.24
USP25-204ENST00000400183 COX17Q14061 63 aa13.52□□□□□ -0.24
USP25-204ENST00000400183 SPTSSBQ8NFR3 76 aa13.52□□□□□ -0.24
USP25-204ENST00000400183 MUC7Q8TAX7 377 aa13.52□□□□□ -0.25
USP25-204ENST00000400183 SMIM11BQ8TCY0 68 aa13.51□□□□□ -0.25
USP25-204ENST00000400183 MPLKIPQ8TAP9 179 aa13.51□□□□□ -0.25
USP25-204ENST00000400183 URB1-AS1Q96HZ7 61 aa13.51□□□□□ -0.25
USP25-204ENST00000400183 GAS8-AS1O95177 125 aa13.5□□□□□ -0.25
USP25-204ENST00000400183 Q8IZM0 81 aa13.5□□□□□ -0.25
USP25-204ENST00000400183 CDC42SE2Q9NRR3 84 aa13.5□□□□□ -0.25
USP25-204ENST00000400183 PRRC2AP48634 2157 aaKnown RBP13.5□□□□□ -0.25
USP25-204ENST00000400183 SPINK6Q6UWN8 80 aa13.49□□□□□ -0.25
USP25-204ENST00000400183 ZNF73O43830 326 aaPredicted RBP13.49□□□□□ -0.25
USP25-204ENST00000400183 FAM19A3Q7Z5A8 133 aa13.49□□□□□ -0.25
USP25-204ENST00000400183 M0R2N4 97 aa13.48□□□□□ -0.25
USP25-204ENST00000400183 IMUPQ9GZP8 106 aa13.48□□□□□ -0.25
USP25-204ENST00000400183 AVPP01185 164 aa13.48□□□□□ -0.25
USP25-204ENST00000400183 CDSNQ15517 529 aa13.47□□□□□ -0.25
USP25-204ENST00000400183 TLN1Q9Y490 2541 aaKnown RBP13.47□□□□□ -0.25
USP25-204ENST00000400183 K7ERS5 55 aa13.47□□□□□ -0.25
USP25-204ENST00000400183 POM121L12Q8N7R1 296 aa13.47□□□□□ -0.25
USP25-204ENST00000400183 HCFC1P51610 2035 aa13.47□□□□□ -0.25
USP25-204ENST00000400183 WFDC13Q8IUB5 93 aa13.47□□□□□ -0.25
USP25-204ENST00000400183 ODF3L2Q3SX64 289 aa13.46□□□□□ -0.25
USP25-204ENST00000400183 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.46□□□□□ -0.25
USP25-204ENST00000400183 SERP2Q8N6R1 65 aa13.46□□□□□ -0.25
USP25-204ENST00000400183 RPL37AP8A6NKH3 93 aa13.46□□□□□ -0.26
USP25-204ENST00000400183 NDUFC1O43677 76 aa13.46□□□□□ -0.26
USP25-204ENST00000400183 IGHV4-30-4P0DP06 118 aa13.46□□□□□ -0.26
USP25-204ENST00000400183 NUP210LQ5VU65 1888 aa13.46□□□□□ -0.26
USP25-204ENST00000400183 IGIPA6NJ69 53 aa13.45□□□□□ -0.26
USP25-204ENST00000400183 NDUFC2-KCTD14E9PQ53 114 aa13.45□□□□□ -0.26
USP25-204ENST00000400183 CYSRT1A8MQ03 144 aa13.45□□□□□ -0.26
USP25-204ENST00000400183 NANOS2P60321 138 aaKnown RBP13.44□□□□□ -0.26
USP25-204ENST00000400183 JMJD1CQ15652 2540 aa13.44□□□□□ -0.26
USP25-204ENST00000400183 A0A0U1RQV1 116 aa13.44□□□□□ -0.26
USP25-204ENST00000400183 OXLD1Q5BKU9 147 aa13.44□□□□□ -0.26
USP25-204ENST00000400183 LINC00474Q9P2X8 69 aa13.44□□□□□ -0.26
USP25-204ENST00000400183 FAM240AA0A1B0GVK7 77 aa13.44□□□□□ -0.26
USP25-204ENST00000400183 A0A0J9YWU9 116 aa13.43□□□□□ -0.26
USP25-204ENST00000400183 LINC00242Q5T6M2 205 aa13.43□□□□□ -0.26
USP25-204ENST00000400183 ATP5EP56381 51 aaPredicted RBP13.43□□□□□ -0.26
USP25-204ENST00000400183 C10orf142B7Z368 130 aa13.42□□□□□ -0.26
USP25-204ENST00000400183 COX7CP15954 63 aa13.42□□□□□ -0.26
USP25-204ENST00000400183 PLAC8L1A1L4L8 177 aa13.41□□□□□ -0.26
USP25-204ENST00000400183 V9GYY9 64 aa13.41□□□□□ -0.26
USP25-204ENST00000400183 LY6G6CO95867 125 aa13.41□□□□□ -0.26
USP25-204ENST00000400183 HRCT1Q6UXD1 115 aa13.41□□□□□ -0.26
USP25-204ENST00000400183 CHCHD7Q9BUK0 85 aa13.41□□□□□ -0.26
USP25-204ENST00000400183 ARHGAP32A7KAX9 2087 aa13.41□□□□□ -0.26
USP25-204ENST00000400183 PRR15LQ9BU68 103 aa13.4□□□□□ -0.26
USP25-204ENST00000400183 CRIP2P52943 208 aaPredicted RBP13.39□□□□□ -0.27
USP25-204ENST00000400183 Q8N9L7 120 aa13.39□□□□□ -0.27
USP25-204ENST00000400183 EGFEM1PQ0D2K5 195 aa13.39□□□□□ -0.27
USP25-204ENST00000400183 IGLV9-49A0A0B4J1Y8 123 aa13.38□□□□□ -0.27
USP25-204ENST00000400183 EDN2P20800 178 aa13.38□□□□□ -0.27
USP25-204ENST00000400183 UNQ6190/PRO20217Q6UXQ8 127 aa13.38□□□□□ -0.27
USP25-204ENST00000400183 SNURFQ9Y675 71 aa13.38□□□□□ -0.27
USP25-204ENST00000400183 PLA2G2AP14555 144 aa13.38□□□□□ -0.27
USP25-204ENST00000400183 COL4A4P53420 1690 aaPredicted RBP13.38□□□□□ -0.27
USP25-204ENST00000400183 IGLV1-51P01701 117 aa13.37□□□□□ -0.27
USP25-204ENST00000400183 Q6Q795 121 aa13.37□□□□□ -0.27
USP25-204ENST00000400183 LINC00694P0DN24 101 aa13.37□□□□□ -0.27
USP25-204ENST00000400183 MRPL55Q7Z7F7 128 aaKnown RBP13.37□□□□□ -0.27
USP25-204ENST00000400183 SMIM1B2RUZ4 78 aa13.36□□□□□ -0.27
USP25-204ENST00000400183 NTM-AS1Q6ZSK4 140 aa13.36□□□□□ -0.27
USP25-204ENST00000400183 Q6JHZ5 121 aa13.34□□□□□ -0.27
USP25-204ENST00000400183 ZFYVE26Q68DK2 2539 aa13.34□□□□□ -0.27
USP25-204ENST00000400183 KRTAP10-9P60411 292 aa13.34□□□□□ -0.27
USP25-204ENST00000400183 M0QXV9 152 aa13.33□□□□□ -0.28
USP25-204ENST00000400183 SMR3AQ99954 134 aa13.33□□□□□ -0.28
USP25-204ENST00000400183 ABCA12Q86UK0 2595 aa13.33□□□□□ -0.28
USP25-204ENST00000400183 BRI3O95415 125 aa13.32□□□□□ -0.28
USP25-204ENST00000400183 PRR4Q16378 134 aa13.32□□□□□ -0.28
USP25-204ENST00000400183 CEP192Q8TEP8 1941 aa13.32□□□□□ -0.28
USP25-204ENST00000400183 C10orf25Q5T742 122 aa13.31□□□□□ -0.28
USP25-204ENST00000400183 MUC22E2RYF6 1773 aaPredicted RBP13.31□□□□□ -0.28
USP25-204ENST00000400183 TRBV10-3A0A0K0K1G6 114 aa13.3□□□□□ -0.28
USP25-204ENST00000400183 RPL28P46779 137 aaKnown RBP13.3□□□□□ -0.28
USP25-204ENST00000400183 NUPR2A6NF83 97 aa13.3□□□□□ -0.28
USP25-204ENST00000400183 ZNF580Q9UK33 172 aa13.3□□□□□ -0.28
USP25-204ENST00000400183 SERP1Q9Y6X1 66 aa13.3□□□□□ -0.28
USP25-204ENST00000400183 TLN2Q9Y4G6 2542 aa13.3□□□□□ -0.28
USP25-204ENST00000400183 IGLV4-60A0A075B6I1 120 aa13.29□□□□□ -0.28
USP25-204ENST00000400183 C9orf116Q5BN46 136 aaPredicted RBP13.29□□□□□ -0.28
USP25-204ENST00000400183 RETNQ9HD89 108 aa13.29□□□□□ -0.28
USP25-204ENST00000400183 CSDC2Q9Y534 153 aaKnown RBP13.29□□□□□ -0.28
USP25-204ENST00000400183 USP9XQ93008 2570 aaPredicted RBP13.28□□□□□ -0.28
USP25-204ENST00000400183 FHL2Q14192 279 aa13.28□□□□□ -0.28
USP25-204ENST00000400183 COX8CQ7Z4L0 72 aa13.28□□□□□ -0.28
USP25-204ENST00000400183 Q8N814 137 aa13.28□□□□□ -0.28
USP25-204ENST00000400183 SRCAPQ6ZRS2 3230 aa13.28□□□□□ -0.28
USP25-204ENST00000400183 A0A096LNJ9 63 aa13.28□□□□□ -0.28
USP25-204ENST00000400183 C6orf223Q8N319 242 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 124.3 ms