RNA–Protein interactions for RNA: ENST00000399523.5

UFD1-202, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best) BASIC

Gene UFD1, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-202ENST00000399523 KRTAP13-2Q52LG2 175 aa10.43□□□□□ -0.74
UFD1-202ENST00000399523 OCC1Q8TAD7 63 aa10.43□□□□□ -0.74
UFD1-202ENST00000399523 RAB4AP20338 218 aa10.42□□□□□ -0.74
UFD1-202ENST00000399523 RPL28P46779 137 aaKnown RBP10.42□□□□□ -0.74
UFD1-202ENST00000399523 LINC00173Q6ZV60 143 aa10.42□□□□□ -0.74
UFD1-202ENST00000399523 FAM104AQ969W3 186 aa10.42□□□□□ -0.74
UFD1-202ENST00000399523 TMEM191AQ9H0A3 160 aa10.42□□□□□ -0.74
UFD1-202ENST00000399523 LINC00304Q8N9R0 145 aa10.41□□□□□ -0.74
UFD1-202ENST00000399523 A8MWL6 223 aa10.4□□□□□ -0.74
UFD1-202ENST00000399523 TMEM18Q96B42 140 aa10.4□□□□□ -0.74
UFD1-202ENST00000399523 KIR2DL4Q99706 377 aa10.4□□□□□ -0.74
UFD1-202ENST00000399523 ANAPC11Q9NYG5 84 aa10.4□□□□□ -0.74
UFD1-202ENST00000399523 C22orf24Q9Y442 160 aa10.4□□□□□ -0.74
UFD1-202ENST00000399523 CTAG1AP78358 180 aa10.39□□□□□ -0.75
UFD1-202ENST00000399523 TEX46H3BTG2 121 aa10.38□□□□□ -0.75
UFD1-202ENST00000399523 BCE1O60756 84 aa10.38□□□□□ -0.75
UFD1-202ENST00000399523 SUMO2P61956 95 aaKnown RBP10.38□□□□□ -0.75
UFD1-202ENST00000399523 SRSF3P84103 164 aaKnown RBP10.38□□□□□ -0.75
UFD1-202ENST00000399523 LBHQ53QV2 105 aaPredicted RBP10.38□□□□□ -0.75
UFD1-202ENST00000399523 LINC00242Q5T6M2 205 aa10.38□□□□□ -0.75
UFD1-202ENST00000399523 NRACQ8N912 160 aa10.38□□□□□ -0.75
UFD1-202ENST00000399523 PPDPFQ9H3Y8 114 aa10.38□□□□□ -0.75
UFD1-202ENST00000399523 SMLR1H3BR10 107 aa10.37□□□□□ -0.75
UFD1-202ENST00000399523 GATCO43716 136 aaKnown RBP10.37□□□□□ -0.75
UFD1-202ENST00000399523 C2orf82Q6UX34 121 aa10.37□□□□□ -0.75
UFD1-202ENST00000399523 AMN1Q8IY45 258 aa10.37□□□□□ -0.75
UFD1-202ENST00000399523 A0A1B0GUT8 65 aa10.36□□□□□ -0.75
UFD1-202ENST00000399523 SMKR1H3BMG3 65 aa10.36□□□□□ -0.75
UFD1-202ENST00000399523 PPP1R17O96001 155 aa10.36□□□□□ -0.75
UFD1-202ENST00000399523 FAM231DQ6ZW35 169 aa10.36□□□□□ -0.75
UFD1-202ENST00000399523 BORCS7Q96B45 105 aa10.36□□□□□ -0.75
UFD1-202ENST00000399523 PACRGQ96M98 296 aaPredicted RBP10.36□□□□□ -0.75
UFD1-202ENST00000399523 KANTRA0A1W2PQU2 76 aa10.35□□□□□ -0.75
UFD1-202ENST00000399523 RPL39P62891 51 aaKnown RBP10.35□□□□□ -0.75
UFD1-202ENST00000399523 MRPS36P82909 103 aaKnown RBP10.35□□□□□ -0.75
UFD1-202ENST00000399523 ASB16-AS1Q495Z4 193 aa10.35□□□□□ -0.75
UFD1-202ENST00000399523 FAM229BQ4G0N7 80 aa10.35□□□□□ -0.75
UFD1-202ENST00000399523 CT83Q5H943 113 aa10.35□□□□□ -0.75
UFD1-202ENST00000399523 KRTAP4-1Q9BYQ7 146 aa10.34□□□□□ -0.75
UFD1-202ENST00000399523 TP73-AS1Q9UF72 201 aa10.34□□□□□ -0.75
UFD1-202ENST00000399523 TGIF2-C20orf24A0A0A6YYL0 155 aa10.33□□□□□ -0.76
UFD1-202ENST00000399523 IFITM10A6NMD0 228 aa10.33□□□□□ -0.76
UFD1-202ENST00000399523 HMSDA8MTL9 139 aa10.33□□□□□ -0.76
UFD1-202ENST00000399523 ZNF727A8MUV8 499 aa10.33□□□□□ -0.76
UFD1-202ENST00000399523 PPP1R2P9O14990 202 aa10.33□□□□□ -0.76
UFD1-202ENST00000399523 HBBP68871 147 aa10.33□□□□□ -0.76
UFD1-202ENST00000399523 SPANXA1Q9NS26 97 aa10.33□□□□□ -0.76
UFD1-202ENST00000399523 HIGD1CA8MV81 97 aa10.31□□□□□ -0.76
UFD1-202ENST00000399523 MRPL55Q7Z7F7 128 aaKnown RBP10.31□□□□□ -0.76
UFD1-202ENST00000399523 TAGLN2P37802 199 aaKnown RBP10.3□□□□□ -0.76
UFD1-202ENST00000399523 LINC00469Q8N7U9 141 aa10.3□□□□□ -0.76
UFD1-202ENST00000399523 TCAPO15273 167 aa10.29□□□□□ -0.76
UFD1-202ENST00000399523 RPL32P62910 135 aaKnown RBP10.29□□□□□ -0.76
UFD1-202ENST00000399523 KRTAP13-1Q8IUC0 172 aa10.29□□□□□ -0.76
UFD1-202ENST00000399523 XAGE1AQ9HD64 81 aa10.29□□□□□ -0.76
UFD1-202ENST00000399523 C20orf78Q9BR46 151 aa10.28□□□□□ -0.76
UFD1-202ENST00000399523 IGKV2D-26A0A0A0MRZ7 120 aa10.27□□□□□ -0.77
UFD1-202ENST00000399523 LINC01561Q8N1V8 128 aa10.27□□□□□ -0.77
UFD1-202ENST00000399523 LINC00337Q8N6G1 96 aa10.27□□□□□ -0.77
UFD1-202ENST00000399523 TRBV24-1A0A075B6N3 115 aa10.26□□□□□ -0.77
UFD1-202ENST00000399523 KRTAP13-3Q3SY46 172 aa10.26□□□□□ -0.77
UFD1-202ENST00000399523 FP248Q71RG6 208 aaPredicted RBP10.26□□□□□ -0.77
UFD1-202ENST00000399523 LINC00167Q96N53 147 aa10.25□□□□□ -0.77
UFD1-202ENST00000399523 RPL37AP8A6NKH3 93 aa10.24□□□□□ -0.77
UFD1-202ENST00000399523 RIGQ13278 110 aa10.24□□□□□ -0.77
UFD1-202ENST00000399523 MRPL51Q4U2R6 128 aaKnown RBP10.24□□□□□ -0.77
UFD1-202ENST00000399523 LCE2CQ5TA81 110 aa10.24□□□□□ -0.77
UFD1-202ENST00000399523 LINC00862A6NCI5 91 aa10.23□□□□□ -0.77
UFD1-202ENST00000399523 TMEM250H0YL14 139 aa10.23□□□□□ -0.77
UFD1-202ENST00000399523 SEC61BP60468 96 aaKnown RBP10.23□□□□□ -0.77
UFD1-202ENST00000399523 PRSS2P07478 247 aa10.22□□□□□ -0.77
UFD1-202ENST00000399523 UBE2AP49459 152 aa10.22□□□□□ -0.77
UFD1-202ENST00000399523 CKS1BP61024 79 aa10.22□□□□□ -0.77
UFD1-202ENST00000399523 FAM104BQ5XKR9 115 aa10.22□□□□□ -0.77
UFD1-202ENST00000399523 SMIM2Q9BVW6 85 aa10.21□□□□□ -0.77
UFD1-202ENST00000399523 PYGO1Q9Y3Y4 419 aa10.2□□□□□ -0.78
UFD1-202ENST00000399523 IGLV4-3A0A075B6K6 122 aa10.19□□□□□ -0.78
UFD1-202ENST00000399523 TNFRSF6BO95407 300 aa10.19□□□□□ -0.78
UFD1-202ENST00000399523 IFI27P40305 119 aaPredicted RBP10.19□□□□□ -0.78
UFD1-202ENST00000399523 C6orf226Q5I0X4 101 aa10.19□□□□□ -0.78
UFD1-202ENST00000399523 SPAG11AQ6PDA7 123 aa10.19□□□□□ -0.78
UFD1-202ENST00000399523 Q6ZN92 141 aa10.19□□□□□ -0.78
UFD1-202ENST00000399523 Q8IZM0 81 aa10.19□□□□□ -0.78
UFD1-202ENST00000399523 OSTCQ9NRP0 149 aa10.19□□□□□ -0.78
UFD1-202ENST00000399523 TOMM7Q9P0U1 55 aa10.19□□□□□ -0.78
UFD1-202ENST00000399523 CKS2P33552 79 aa10.18□□□□□ -0.78
UFD1-202ENST00000399523 GAGE10A6NGK3 116 aa10.17□□□□□ -0.78
UFD1-202ENST00000399523 LINC01551Q86U37 167 aa10.17□□□□□ -0.78
UFD1-202ENST00000399523 TMEM141Q96I45 108 aa10.17□□□□□ -0.78
UFD1-202ENST00000399523 PNRC1Q12796 327 aaPredicted RBP10.16□□□□□ -0.78
UFD1-202ENST00000399523 C3orf22Q8N5N4 141 aa10.16□□□□□ -0.78
UFD1-202ENST00000399523 ALKBH7Q9BT30 221 aaPredicted RBP10.16□□□□□ -0.78
UFD1-202ENST00000399523 IGLV5-37A0A075B6J1 123 aa10.15□□□□□ -0.78
UFD1-202ENST00000399523 F8VRH5 84 aa10.15□□□□□ -0.78
UFD1-202ENST00000399523 EIF5A2Q9GZV4 153 aaKnown RBP10.15□□□□□ -0.78
UFD1-202ENST00000399523 V9GYV3 84 aa10.15□□□□□ -0.78
UFD1-202ENST00000399523 TEX43Q6ZNM6 134 aa10.14□□□□□ -0.79
UFD1-202ENST00000399523 NPYP01303 97 aa10.13□□□□□ -0.79
UFD1-202ENST00000399523 CFC1BP0CG36 223 aa10.13□□□□□ -0.79
UFD1-202ENST00000399523 MT1HP80294 61 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms