RNA–Protein interactions for RNA: ENST00000398005.3

HMGN2P39-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 39, humanhuman

BASIC

Gene HMGN2P39, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P39-201ENST00000398005 PLGLAQ15195 96 aa0.85□□□□□ -2.27
HMGN2P39-201ENST00000398005 KRTAP13-1Q8IUC0 172 aa0.85□□□□□ -2.27
HMGN2P39-201ENST00000398005 DEFB107AQ8IZN7 70 aa0.85□□□□□ -2.27
HMGN2P39-201ENST00000398005 DIP2BQ9P265 1576 aa0.85□□□□□ -2.27
HMGN2P39-201ENST00000398005 ESPL1Q14674 2120 aa0.85□□□□□ -2.27
HMGN2P39-201ENST00000398005 ZNF236Q9UL36 1845 aa0.85□□□□□ -2.27
HMGN2P39-201ENST00000398005 NEXMIFQ5QGS0 1516 aa0.84□□□□□ -2.27
HMGN2P39-201ENST00000398005 ANKARQ7Z5J8 1434 aa0.84□□□□□ -2.27
HMGN2P39-201ENST00000398005 MYMXA0A1B0GTQ4 84 aa0.84□□□□□ -2.27
HMGN2P39-201ENST00000398005 PRB1P04280 392 aa0.84□□□□□ -2.27
HMGN2P39-201ENST00000398005 FXYD6P3P58550 94 aa0.84□□□□□ -2.27
HMGN2P39-201ENST00000398005 GNGT1P63211 74 aa0.84□□□□□ -2.27
HMGN2P39-201ENST00000398005 Q6JHZ5 121 aa0.84□□□□□ -2.27
HMGN2P39-201ENST00000398005 Q6ZSA8 131 aa0.84□□□□□ -2.27
HMGN2P39-201ENST00000398005 TMEM263Q8WUH6 116 aaKnown RBP0.84□□□□□ -2.27
HMGN2P39-201ENST00000398005 SPRR4Q96PI1 79 aa0.84□□□□□ -2.27
HMGN2P39-201ENST00000398005 LINC00472Q9H8W2 130 aa0.84□□□□□ -2.27
HMGN2P39-201ENST00000398005 LINC00846Q9NV44 126 aa0.84□□□□□ -2.27
HMGN2P39-201ENST00000398005 BTAF1O14981 1849 aa0.84□□□□□ -2.28
HMGN2P39-201ENST00000398005 PDCD11Q14690 1871 aaKnown RBP0.84□□□□□ -2.28
HMGN2P39-201ENST00000398005 BAHCC1Q9P281 2608 aa0.84□□□□□ -2.28
HMGN2P39-201ENST00000398005 INTS1Q8N201 2190 aaKnown RBP0.83□□□□□ -2.28
HMGN2P39-201ENST00000398005 MED12Q93074 2177 aa0.83□□□□□ -2.28
HMGN2P39-201ENST00000398005 RAPGEF6Q8TEU7 1601 aa0.83□□□□□ -2.28
HMGN2P39-201ENST00000398005 SMIM31A0A1B0GVY4 71 aa0.83□□□□□ -2.28
HMGN2P39-201ENST00000398005 CEBPZOSA8MTT3 80 aa0.83□□□□□ -2.28
HMGN2P39-201ENST00000398005 G3V318 75 aa0.83□□□□□ -2.28
HMGN2P39-201ENST00000398005 H0Y9P7 68 aa0.83□□□□□ -2.28
HMGN2P39-201ENST00000398005 PIN1P1O15428 100 aa0.83□□□□□ -2.28
HMGN2P39-201ENST00000398005 CFDP00746 253 aaPredicted RBP0.83□□□□□ -2.28
HMGN2P39-201ENST00000398005 ANGP03950 147 aaKnown RBP0.83□□□□□ -2.28
HMGN2P39-201ENST00000398005 KRTAP12-3P60328 96 aa0.83□□□□□ -2.28
HMGN2P39-201ENST00000398005 C10orf113Q5VZT2 155 aa0.83□□□□□ -2.28
HMGN2P39-201ENST00000398005 C6orf201Q7Z4U5 140 aa0.83□□□□□ -2.28
HMGN2P39-201ENST00000398005 C18orf32Q8TCD1 76 aa0.83□□□□□ -2.28
HMGN2P39-201ENST00000398005 LINC01600Q96MT4 127 aa0.83□□□□□ -2.28
HMGN2P39-201ENST00000398005 UBR1Q8IWV7 1749 aa0.83□□□□□ -2.28
HMGN2P39-201ENST00000398005 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.83□□□□□ -2.28
HMGN2P39-201ENST00000398005 MED13Q9UHV7 2174 aa0.83□□□□□ -2.28
HMGN2P39-201ENST00000398005 DNMBPQ6XZF7 1577 aa0.83□□□□□ -2.28
HMGN2P39-201ENST00000398005 SPTBP11277 2137 aa0.82□□□□□ -2.28
HMGN2P39-201ENST00000398005 CCDC88BA6NC98 1476 aa0.82□□□□□ -2.28
HMGN2P39-201ENST00000398005 CCDC141Q6ZP82 1450 aa0.82□□□□□ -2.28
HMGN2P39-201ENST00000398005 KNDC1Q76NI1 1749 aa0.82□□□□□ -2.28
HMGN2P39-201ENST00000398005 LRRIQ1Q96JM4 1722 aa0.82□□□□□ -2.28
HMGN2P39-201ENST00000398005 SMIM13P0DJ93 91 aa0.82□□□□□ -2.28
HMGN2P39-201ENST00000398005 S100A3P33764 101 aa0.82□□□□□ -2.28
HMGN2P39-201ENST00000398005 UBE2DNLQ8IWF7 75 aa0.82□□□□□ -2.28
HMGN2P39-201ENST00000398005 ABCC1P33527 1531 aa0.82□□□□□ -2.28
HMGN2P39-201ENST00000398005 KCPQ6ZWJ8 1503 aa0.82□□□□□ -2.28
HMGN2P39-201ENST00000398005 LRRC37A2A6NM11 1700 aa0.81□□□□□ -2.28
HMGN2P39-201ENST00000398005 NUP188Q5SRE5 1749 aa0.81□□□□□ -2.28
HMGN2P39-201ENST00000398005 C1orf167Q5SNV9 1468 aa0.81□□□□□ -2.28
HMGN2P39-201ENST00000398005 CUX1P39880 1505 aa0.81□□□□□ -2.28
HMGN2P39-201ENST00000398005 ERICH3Q5RHP9 1530 aa0.81□□□□□ -2.28
HMGN2P39-201ENST00000398005 LAMA4Q16363 1823 aa0.81□□□□□ -2.28
HMGN2P39-201ENST00000398005 TRBV6-1A0A0K0K1D8 114 aa0.81□□□□□ -2.28
HMGN2P39-201ENST00000398005 PI4KAP42356 2102 aa0.81□□□□□ -2.28
HMGN2P39-201ENST00000398005 PROK2Q9HC23 129 aa0.81□□□□□ -2.28
HMGN2P39-201ENST00000398005 UBE2D4Q9Y2X8 147 aa0.81□□□□□ -2.28
HMGN2P39-201ENST00000398005 SSC5DA1L4H1 1573 aa0.81□□□□□ -2.28
HMGN2P39-201ENST00000398005 SPAG17Q6Q759 2223 aa0.81□□□□□ -2.28
HMGN2P39-201ENST00000398005 CLIP1P30622 1438 aa0.81□□□□□ -2.28
HMGN2P39-201ENST00000398005 MAP2P11137 1827 aaKnown RBP0.8□□□□□ -2.28
HMGN2P39-201ENST00000398005 CFAP74Q9C0B2 1584 aa0.8□□□□□ -2.28
HMGN2P39-201ENST00000398005 A0A087WXM4 84 aa0.8□□□□□ -2.28
HMGN2P39-201ENST00000398005 A0A1B0GUT8 65 aa0.8□□□□□ -2.28
HMGN2P39-201ENST00000398005 K7EIL1 84 aa0.8□□□□□ -2.28
HMGN2P39-201ENST00000398005 SPINK7P58062 85 aa0.8□□□□□ -2.28
HMGN2P39-201ENST00000398005 KRTAP12-4P60329 112 aa0.8□□□□□ -2.28
HMGN2P39-201ENST00000398005 SPATA8Q6RVD6 105 aa0.8□□□□□ -2.28
HMGN2P39-201ENST00000398005 DOCK11Q5JSL3 2073 aa0.8□□□□□ -2.28
HMGN2P39-201ENST00000398005 MUC19Q7Z5P9 8384 aa0.8□□□□□ -2.28
HMGN2P39-201ENST00000398005 NCOA2Q15596 1464 aa0.8□□□□□ -2.28
HMGN2P39-201ENST00000398005 LRRC9Q6ZRR7 1453 aa0.8□□□□□ -2.28
HMGN2P39-201ENST00000398005 MYH4Q9Y623 1939 aa0.79□□□□□ -2.28
HMGN2P39-201ENST00000398005 UGGT2Q9NYU1 1516 aa0.79□□□□□ -2.28
HMGN2P39-201ENST00000398005 PTPN23Q9H3S7 1636 aa0.79□□□□□ -2.28
HMGN2P39-201ENST00000398005 ABCA4P78363 2273 aa0.79□□□□□ -2.28
HMGN2P39-201ENST00000398005 A0A1B0GU69 56 aa0.79□□□□□ -2.28
HMGN2P39-201ENST00000398005 UMAD1C9J7I0 102 aa0.79□□□□□ -2.28
HMGN2P39-201ENST00000398005 SSBP3-AS1Q7Z2R9 100 aa0.79□□□□□ -2.28
HMGN2P39-201ENST00000398005 KIF20BQ96Q89 1820 aa0.79□□□□□ -2.28
HMGN2P39-201ENST00000398005 ABCA8O94911 1581 aa0.79□□□□□ -2.28
HMGN2P39-201ENST00000398005 ERCC6L2Q5T890 1561 aa0.79□□□□□ -2.28
HMGN2P39-201ENST00000398005 TMEM131LA2VDJ0 1609 aa0.78□□□□□ -2.28
HMGN2P39-201ENST00000398005 C5P01031 1676 aa0.78□□□□□ -2.28
HMGN2P39-201ENST00000398005 CACNA1GO43497 2377 aa0.78□□□□□ -2.28
HMGN2P39-201ENST00000398005 CRYBG1Q9Y4K1 1723 aa0.78□□□□□ -2.28
HMGN2P39-201ENST00000398005 Q5BKY6 102 aa0.78□□□□□ -2.28
HMGN2P39-201ENST00000398005 SPINK9Q5DT21 86 aa0.78□□□□□ -2.28
HMGN2P39-201ENST00000398005 DEFB121Q5J5C9 76 aa0.78□□□□□ -2.28
HMGN2P39-201ENST00000398005 PLAC8Q9NZF1 115 aa0.78□□□□□ -2.28
HMGN2P39-201ENST00000398005 KIAA0100Q14667 2235 aaKnown RBP0.78□□□□□ -2.28
HMGN2P39-201ENST00000398005 CACNA1BQ00975 2339 aa0.78□□□□□ -2.28
HMGN2P39-201ENST00000398005 PPRC1Q5VV67 1664 aaKnown RBP0.78□□□□□ -2.29
HMGN2P39-201ENST00000398005 IFI27P40305 119 aaPredicted RBP0.77□□□□□ -2.29
HMGN2P39-201ENST00000398005 DEFB112Q30KQ8 113 aa0.77□□□□□ -2.29
HMGN2P39-201ENST00000398005 ATP5EP2Q5VTU8 51 aa0.77□□□□□ -2.29
HMGN2P39-201ENST00000398005 HEPN1Q6WQI6 88 aa0.77□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms