RNA–Protein interactions for RNA: ENST00000397036.4

MCF2L-209, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-209ENST00000397036 IGHV3-33P01772 117 aa9.2□□□□□ -0.94
MCF2L-209ENST00000397036 IGHV3-30-3P0DP02 117 aa9.2□□□□□ -0.94
MCF2L-209ENST00000397036 IGHV3-30-5P0DP03 117 aa9.2□□□□□ -0.94
MCF2L-209ENST00000397036 COX8AP10176 69 aa9.2□□□□□ -0.94
MCF2L-209ENST00000397036 CD164L2Q6UWJ8 174 aa9.2□□□□□ -0.94
MCF2L-209ENST00000397036 C10orf126Q8N4M7 172 aa9.2□□□□□ -0.94
MCF2L-209ENST00000397036 A0A087WZ39 114 aa9.19□□□□□ -0.94
MCF2L-209ENST00000397036 IGHV1-58A0A0C4DH39 117 aa9.19□□□□□ -0.94
MCF2L-209ENST00000397036 Q9H8V8 135 aa9.19□□□□□ -0.94
MCF2L-209ENST00000397036 IGKV2D-26A0A0A0MRZ7 120 aa9.18□□□□□ -0.94
MCF2L-209ENST00000397036 IGKV3OR2-268A0A0C4DH90 116 aa9.18□□□□□ -0.94
MCF2L-209ENST00000397036 IGLV5-39A0A0G2JS06 123 aa9.18□□□□□ -0.94
MCF2L-209ENST00000397036 IBA57-AS1B1ANH7 110 aa9.18□□□□□ -0.94
MCF2L-209ENST00000397036 LEPROTO15243 131 aa9.18□□□□□ -0.94
MCF2L-209ENST00000397036 CRPP02741 224 aa9.18□□□□□ -0.94
MCF2L-209ENST00000397036 BOD1L2Q8IYS8 172 aa9.18□□□□□ -0.94
MCF2L-209ENST00000397036 PLEKHB2Q96CS7 222 aa9.18□□□□□ -0.94
MCF2L-209ENST00000397036 MIEN1Q9BRT3 115 aa9.18□□□□□ -0.94
MCF2L-209ENST00000397036 UQCR10Q9UDW1 63 aa9.18□□□□□ -0.94
MCF2L-209ENST00000397036 SLC25A34Q6PIV7 304 aa9.17□□□□□ -0.94
MCF2L-209ENST00000397036 CHCHD10Q8WYQ3 142 aaPredicted RBP9.17□□□□□ -0.94
MCF2L-209ENST00000397036 C14orf144Q96I85 54 aa9.17□□□□□ -0.94
MCF2L-209ENST00000397036 TGP01266 2768 aa9.17□□□□□ -0.94
MCF2L-209ENST00000397036 UBE2WQ96B02 151 aa9.16□□□□□ -0.94
MCF2L-209ENST00000397036 PRO1933Q9H354 126 aa9.16□□□□□ -0.94
MCF2L-209ENST00000397036 TRAV8-3A0A0A6YYJ7 113 aa9.15□□□□□ -0.94
MCF2L-209ENST00000397036 SMIM1B2RUZ4 78 aa9.15□□□□□ -0.94
MCF2L-209ENST00000397036 XCL1P47992 114 aa9.15□□□□□ -0.94
MCF2L-209ENST00000397036 NMUP48645 174 aa9.15□□□□□ -0.94
MCF2L-209ENST00000397036 CLPSL2Q6UWE3 100 aa9.15□□□□□ -0.94
MCF2L-209ENST00000397036 UBE2DNLQ8IWF7 75 aa9.15□□□□□ -0.94
MCF2L-209ENST00000397036 CSMD3Q7Z407 3707 aa9.15□□□□□ -0.94
MCF2L-209ENST00000397036 J3QQQ9 107 aa9.15□□□□□ -0.95
MCF2L-209ENST00000397036 FOXI1Q12951 378 aa9.15□□□□□ -0.95
MCF2L-209ENST00000397036 C3orf84H3BNL1 204 aa9.14□□□□□ -0.95
MCF2L-209ENST00000397036 SPINK8P0C7L1 97 aa9.14□□□□□ -0.95
MCF2L-209ENST00000397036 ZFAND6Q6FIF0 208 aa9.14□□□□□ -0.95
MCF2L-209ENST00000397036 KRTAP26-1Q6PEX3 210 aa9.14□□□□□ -0.95
MCF2L-209ENST00000397036 PCP2Q8IVA1 136 aa9.14□□□□□ -0.95
MCF2L-209ENST00000397036 PLECQ15149 4684 aaKnown RBP9.13□□□□□ -0.95
MCF2L-209ENST00000397036 COX7A2LO14548 114 aa9.13□□□□□ -0.95
MCF2L-209ENST00000397036 C5orf38Q86SI9 138 aa9.13□□□□□ -0.95
MCF2L-209ENST00000397036 MYMXA0A1B0GTQ4 84 aa9.12□□□□□ -0.95
MCF2L-209ENST00000397036 LGALS3P17931 250 aaKnown RBP9.12□□□□□ -0.95
MCF2L-209ENST00000397036 TENM2Q9NT68 2774 aa9.12□□□□□ -0.95
MCF2L-209ENST00000397036 IGLV10-54A0A075B6I4 117 aa9.11□□□□□ -0.95
MCF2L-209ENST00000397036 GAGE12HA6NDE8 117 aa9.11□□□□□ -0.95
MCF2L-209ENST00000397036 DDTP30046 118 aa9.11□□□□□ -0.95
MCF2L-209ENST00000397036 TSPEAR-AS2P59090 65 aa9.11□□□□□ -0.95
MCF2L-209ENST00000397036 MAPKAPK5-AS1Q8N8E1 139 aa9.11□□□□□ -0.95
MCF2L-209ENST00000397036 RMI2Q96E14 147 aa9.11□□□□□ -0.95
MCF2L-209ENST00000397036 C1orf43Q9BWL3 253 aa9.11□□□□□ -0.95
MCF2L-209ENST00000397036 HIGD1BQ9P298 99 aa9.11□□□□□ -0.95
MCF2L-209ENST00000397036 COX11Q9Y6N1 276 aa9.11□□□□□ -0.95
MCF2L-209ENST00000397036 IGHV3-64A0A075B6Q5 118 aa9.1□□□□□ -0.95
MCF2L-209ENST00000397036 TTC32Q5I0X7 151 aa9.1□□□□□ -0.95
MCF2L-209ENST00000397036 APOMO95445 188 aa9.1□□□□□ -0.95
MCF2L-209ENST00000397036 CASC10Q5T4H9 136 aa9.1□□□□□ -0.95
MCF2L-209ENST00000397036 SFTA2Q6UW10 78 aa9.1□□□□□ -0.95
MCF2L-209ENST00000397036 TTTY13Q9BZ97 58 aa9.1□□□□□ -0.95
MCF2L-209ENST00000397036 VPS13DQ5THJ4 4388 aa9.09□□□□□ -0.95
MCF2L-209ENST00000397036 ZNF815PA8K554 130 aa9.09□□□□□ -0.95
MCF2L-209ENST00000397036 NDUFA1O15239 70 aa9.09□□□□□ -0.95
MCF2L-209ENST00000397036 Q8IZM0 81 aa9.09□□□□□ -0.95
MCF2L-209ENST00000397036 NDUFA12Q9UI09 145 aa9.09□□□□□ -0.95
MCF2L-209ENST00000397036 STARD9Q9P2P6 4700 aa9.09□□□□□ -0.95
MCF2L-209ENST00000397036 MALP21145 153 aa9.08□□□□□ -0.96
MCF2L-209ENST00000397036 C2orf91Q6ZV80 131 aa9.08□□□□□ -0.96
MCF2L-209ENST00000397036 COX7B2Q8TF08 81 aa9.08□□□□□ -0.96
MCF2L-209ENST00000397036 NBDYA0A0U1RRE5 68 aa9.07□□□□□ -0.96
MCF2L-209ENST00000397036 HNRNPA3P51991 378 aaKnown RBP9.07□□□□□ -0.96
MCF2L-209ENST00000397036 HERV-K104P63124 156 aa9.07□□□□□ -0.96
MCF2L-209ENST00000397036 ZNF625Q96I27 306 aaPredicted RBP9.07□□□□□ -0.96
MCF2L-209ENST00000397036 TM2D2Q9BX73 214 aa9.07□□□□□ -0.96
MCF2L-209ENST00000397036 IGKV2D-24A0A075B6R9 120 aa9.06□□□□□ -0.96
MCF2L-209ENST00000397036 PCP4L1A6NKN8 68 aa9.06□□□□□ -0.96
MCF2L-209ENST00000397036 KIAA0087Q14695 138 aa9.06□□□□□ -0.96
MCF2L-209ENST00000397036 CXCL5P42830 114 aa9.05□□□□□ -0.96
MCF2L-209ENST00000397036 C6orf226Q5I0X4 101 aa9.05□□□□□ -0.96
MCF2L-209ENST00000397036 CFAP161Q6P656 301 aa9.05□□□□□ -0.96
MCF2L-209ENST00000397036 KRTAP1-5Q9BYS1 174 aa9.05□□□□□ -0.96
MCF2L-209ENST00000397036 F8WDY8 70 aa9.05□□□□□ -0.96
MCF2L-209ENST00000397036 TIMM17BO60830 172 aa9.05□□□□□ -0.96
MCF2L-209ENST00000397036 PRSS2P07478 247 aa9.05□□□□□ -0.96
MCF2L-209ENST00000397036 ORAOV1Q8WV07 137 aa9.05□□□□□ -0.96
MCF2L-209ENST00000397036 Q9HAA7 133 aa9.05□□□□□ -0.96
MCF2L-209ENST00000397036 DNAH1Q9P2D7 4330 aa9.04□□□□□ -0.96
MCF2L-209ENST00000397036 A0A0J9YXY3 114 aa9.04□□□□□ -0.96
MCF2L-209ENST00000397036 TAL2Q16559 108 aa9.04□□□□□ -0.96
MCF2L-209ENST00000397036 SCGB1D4Q6XE38 83 aa9.04□□□□□ -0.96
MCF2L-209ENST00000397036 LINC00587B1AMM8 73 aa9.03□□□□□ -0.96
MCF2L-209ENST00000397036 SPANXB1Q9NS25 103 aaPredicted RBP9.03□□□□□ -0.96
MCF2L-209ENST00000397036 TOMM7Q9P0U1 55 aa9.03□□□□□ -0.96
MCF2L-209ENST00000397036 TP73-AS1Q9UF72 201 aa9.03□□□□□ -0.96
MCF2L-209ENST00000397036 CTAG1AP78358 180 aa9.02□□□□□ -0.97
MCF2L-209ENST00000397036 GVQW2A0A096LPI5 108 aaPredicted RBP9.01□□□□□ -0.97
MCF2L-209ENST00000397036 SPAG11BQ08648 103 aa9.01□□□□□ -0.97
MCF2L-209ENST00000397036 Q6ZR54 194 aa9.01□□□□□ -0.97
MCF2L-209ENST00000397036 Q6ZVH6 145 aa9.01□□□□□ -0.97
MCF2L-209ENST00000397036 C2orf48Q96LS8 159 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms