RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 C9orf116Q5BN46 136 aaPredicted RBP10.18□□□□□ -0.78
DDR1-229ENST00000396342 SMIM2Q9BVW6 85 aa10.18□□□□□ -0.78
DDR1-229ENST00000396342 MRPL54Q6P161 138 aaKnown RBP10.17□□□□□ -0.78
DDR1-229ENST00000396342 FAT3Q8TDW7 4589 aa10.17□□□□□ -0.78
DDR1-229ENST00000396342 D6R8Y8 96 aa10.16□□□□□ -0.78
DDR1-229ENST00000396342 C1orf137Q5JT78 98 aa10.16□□□□□ -0.78
DDR1-229ENST00000396342 OPRPNQ99935 248 aaPredicted RBP10.16□□□□□ -0.78
DDR1-229ENST00000396342 MRPL35Q9NZE8 188 aaKnown RBP10.16□□□□□ -0.78
DDR1-229ENST00000396342 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.15□□□□□ -0.78
DDR1-229ENST00000396342 MRPS36P82909 103 aaKnown RBP10.15□□□□□ -0.78
DDR1-229ENST00000396342 ODF1Q14990 250 aa10.15□□□□□ -0.78
DDR1-229ENST00000396342 ORMDL3Q8N138 153 aa10.15□□□□□ -0.78
DDR1-229ENST00000396342 A0A087WZ39 114 aa10.14□□□□□ -0.79
DDR1-229ENST00000396342 RPL39P62891 51 aaKnown RBP10.14□□□□□ -0.79
DDR1-229ENST00000396342 SRSF9Q13242 221 aaKnown RBP eCLIP10.14□□□□□ -0.79
DDR1-229ENST00000396342 Q6ZN92 141 aa10.14□□□□□ -0.79
DDR1-229ENST00000396342 DIRC1Q969H9 104 aa10.14□□□□□ -0.79
DDR1-229ENST00000396342 A0A1W2PNN7 141 aa10.13□□□□□ -0.79
DDR1-229ENST00000396342 PACRGQ96M98 296 aaPredicted RBP10.13□□□□□ -0.79
DDR1-229ENST00000396342 C2orf88Q9BSF0 95 aa10.13□□□□□ -0.79
DDR1-229ENST00000396342 PSORS1C2Q9UIG4 136 aa10.13□□□□□ -0.79
DDR1-229ENST00000396342 UBE2BP63146 152 aa10.12□□□□□ -0.79
DDR1-229ENST00000396342 TMEM136Q6ZRR5 245 aa10.12□□□□□ -0.79
DDR1-229ENST00000396342 ATP5L2Q7Z4Y8 100 aa10.12□□□□□ -0.79
DDR1-229ENST00000396342 PRELID3AQ96N28 172 aa10.12□□□□□ -0.79
DDR1-229ENST00000396342 PRSS2P07478 247 aa10.11□□□□□ -0.79
DDR1-229ENST00000396342 PKHD1L1Q86WI1 4243 aa10.1□□□□□ -0.79
DDR1-229ENST00000396342 IGHV3OR16-9A0A0B4J2B5 98 aa10.1□□□□□ -0.79
DDR1-229ENST00000396342 KRTAP10-8P60410 259 aa10.1□□□□□ -0.79
DDR1-229ENST00000396342 GAGE2EQ4V326 116 aa10.1□□□□□ -0.79
DDR1-229ENST00000396342 TEX43Q6ZNM6 134 aa10.1□□□□□ -0.79
DDR1-229ENST00000396342 PHF5AQ7RTV0 110 aaKnown RBP10.1□□□□□ -0.79
DDR1-229ENST00000396342 TMEM141Q96I45 108 aa10.1□□□□□ -0.79
DDR1-229ENST00000396342 MAP1LC3AQ9H492 121 aa10.1□□□□□ -0.79
DDR1-229ENST00000396342 GAGE2DQ9UEU5 116 aa10.1□□□□□ -0.79
DDR1-229ENST00000396342 LAMTOR2Q9Y2Q5 125 aa10.1□□□□□ -0.79
DDR1-229ENST00000396342 NPYP01303 97 aa10.09□□□□□ -0.79
DDR1-229ENST00000396342 G0S2P27469 103 aa10.08□□□□□ -0.8
DDR1-229ENST00000396342 FAM19A5Q7Z5A7 132 aaPredicted RBP10.08□□□□□ -0.8
DDR1-229ENST00000396342 CYSLTR1Q9Y271 337 aa10.08□□□□□ -0.8
DDR1-229ENST00000396342 PYGO1Q9Y3Y4 419 aa10.08□□□□□ -0.8
DDR1-229ENST00000396342 TRBV30A0A0K0K1B3 111 aa10.07□□□□□ -0.8
DDR1-229ENST00000396342 IGLV7-43P04211 117 aa10.07□□□□□ -0.8
DDR1-229ENST00000396342 TLX1NBP0CAT3 122 aa10.07□□□□□ -0.8
DDR1-229ENST00000396342 CKS1BP61024 79 aa10.07□□□□□ -0.8
DDR1-229ENST00000396342 PAPPA-AS1Q5QFB9 102 aa10.07□□□□□ -0.8
DDR1-229ENST00000396342 UNQ6190/PRO20217Q6UXQ8 127 aa10.07□□□□□ -0.8
DDR1-229ENST00000396342 LOC389332A0A1B0GUA5 103 aa10.06□□□□□ -0.8
DDR1-229ENST00000396342 A0A1B0GVG6 124 aa10.06□□□□□ -0.8
DDR1-229ENST00000396342 A0A1B0GXF2 115 aa10.06□□□□□ -0.8
DDR1-229ENST00000396342 MT-ND4LP03901 98 aa10.06□□□□□ -0.8
DDR1-229ENST00000396342 RAB14P61106 215 aa10.06□□□□□ -0.8
DDR1-229ENST00000396342 VCX2Q9H322 139 aa10.06□□□□□ -0.8
DDR1-229ENST00000396342 UBR4Q5T4S7 5183 aa10.06□□□□□ -0.8
DDR1-229ENST00000396342 C9JQL5 133 aa10.05□□□□□ -0.8
DDR1-229ENST00000396342 UBE2D1P51668 147 aa10.05□□□□□ -0.8
DDR1-229ENST00000396342 SEC11AP67812 179 aa10.05□□□□□ -0.8
DDR1-229ENST00000396342 PNRC1Q12796 327 aaPredicted RBP10.05□□□□□ -0.8
DDR1-229ENST00000396342 ORMDL2Q53FV1 153 aa10.05□□□□□ -0.8
DDR1-229ENST00000396342 M0QXV9 152 aa10.04□□□□□ -0.8
DDR1-229ENST00000396342 SRSF3P84103 164 aaKnown RBP10.04□□□□□ -0.8
DDR1-229ENST00000396342 C6orf226Q5I0X4 101 aa10.04□□□□□ -0.8
DDR1-229ENST00000396342 LINC01561Q8N1V8 128 aa10.04□□□□□ -0.8
DDR1-229ENST00000396342 ANAPC16Q96DE5 110 aa10.04□□□□□ -0.8
DDR1-229ENST00000396342 C6orf48Q9UBA6 75 aa10.04□□□□□ -0.8
DDR1-229ENST00000396342 IGLV4-3A0A075B6K6 122 aa10.03□□□□□ -0.8
DDR1-229ENST00000396342 NDUFC2-KCTD14E9PQ53 114 aa10.03□□□□□ -0.8
DDR1-229ENST00000396342 K7EMI3 77 aa10.03□□□□□ -0.8
DDR1-229ENST00000396342 TOMM7Q9P0U1 55 aa10.03□□□□□ -0.8
DDR1-229ENST00000396342 NPSP0C0P6 89 aa10.02□□□□□ -0.81
DDR1-229ENST00000396342 LINC00242Q5T6M2 205 aa10.02□□□□□ -0.81
DDR1-229ENST00000396342 C10orf25Q5T742 122 aa10.02□□□□□ -0.81
DDR1-229ENST00000396342 C2orf66Q6UXQ4 117 aa10.02□□□□□ -0.81
DDR1-229ENST00000396342 IGLV1-50A0A075B6I6 118 aa10.01□□□□□ -0.81
DDR1-229ENST00000396342 H0Y9J4 135 aa10.01□□□□□ -0.81
DDR1-229ENST00000396342 LBHQ53QV2 105 aaPredicted RBP10.01□□□□□ -0.81
DDR1-229ENST00000396342 Q8N8P6 123 aa10.01□□□□□ -0.81
DDR1-229ENST00000396342 GEMIN7Q9H840 131 aaKnown RBP10.01□□□□□ -0.81
DDR1-229ENST00000396342 NXT2Q9NPJ8 142 aaKnown RBP10.01□□□□□ -0.81
DDR1-229ENST00000396342 FAM168BA1KXE4 195 aa10□□□□□ -0.81
DDR1-229ENST00000396342 RPL13AP40429 203 aaKnown RBP10□□□□□ -0.81
DDR1-229ENST00000396342 CTDSP1Q9GZU7 261 aa10□□□□□ -0.81
DDR1-229ENST00000396342 PRSS47A8MTI9 375 aa9.99□□□□□ -0.81
DDR1-229ENST00000396342 HERVK_113P63121 156 aa9.99□□□□□ -0.81
DDR1-229ENST00000396342 ALKBH7Q9BT30 221 aaPredicted RBP9.99□□□□□ -0.81
DDR1-229ENST00000396342 C2orf82Q6UX34 121 aa9.98□□□□□ -0.81
DDR1-229ENST00000396342 PRR26Q8N8Z3 221 aa9.98□□□□□ -0.81
DDR1-229ENST00000396342 FAM104AQ969W3 186 aa9.97□□□□□ -0.81
DDR1-229ENST00000396342 KIAA0087Q14695 138 aa9.96□□□□□ -0.82
DDR1-229ENST00000396342 Q8IZM0 81 aa9.96□□□□□ -0.82
DDR1-229ENST00000396342 LINC01549A6NIU2 74 aa9.95□□□□□ -0.82
DDR1-229ENST00000396342 CXCL5P42830 114 aa9.95□□□□□ -0.82
DDR1-229ENST00000396342 NUPR1O60356 82 aa9.94□□□□□ -0.82
DDR1-229ENST00000396342 F8VRH5 84 aa9.93□□□□□ -0.82
DDR1-229ENST00000396342 AMELXQ99217 191 aa9.93□□□□□ -0.82
DDR1-229ENST00000396342 LINC00469Q8N7U9 141 aa9.92□□□□□ -0.82
DDR1-229ENST00000396342 CARHSP1Q9Y2V2 147 aaKnown RBP9.92□□□□□ -0.82
DDR1-229ENST00000396342 RPL28P46779 137 aaKnown RBP9.91□□□□□ -0.82
DDR1-229ENST00000396342 C9orf129Q5T035 196 aaKnown RBP9.91□□□□□ -0.82
DDR1-229ENST00000396342 SCGB3A1Q96QR1 104 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms