RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 KLLNB2CW77 178 aa8.91□□□□□ -0.98
SLC28A1-203ENST00000394573 ESRGQ1W209 222 aa8.91□□□□□ -0.98
SLC28A1-203ENST00000394573 Q6ZSN1 163 aa8.91□□□□□ -0.98
SLC28A1-203ENST00000394573 Q8N3U1 123 aa8.91□□□□□ -0.98
SLC28A1-203ENST00000394573 H0YGX0 51 aa8.9□□□□□ -0.98
SLC28A1-203ENST00000394573 C19orf84I3L1E1 186 aa8.9□□□□□ -0.98
SLC28A1-203ENST00000394573 LY6HO94772 140 aa8.9□□□□□ -0.98
SLC28A1-203ENST00000394573 LINC01547P58512 204 aaPredicted RBP8.9□□□□□ -0.98
SLC28A1-203ENST00000394573 LINC00158P58513 81 aa8.9□□□□□ -0.99
SLC28A1-203ENST00000394573 Q6ZRU5 148 aa8.9□□□□□ -0.99
SLC28A1-203ENST00000394573 APRG1Q8IVJ8 170 aa8.9□□□□□ -0.99
SLC28A1-203ENST00000394573 BBC3Q96PG8 261 aaPredicted RBP8.9□□□□□ -0.99
SLC28A1-203ENST00000394573 NOTCH3Q9UM47 2321 aa8.89□□□□□ -0.99
SLC28A1-203ENST00000394573 IGHV3-11P01762 117 aa8.89□□□□□ -0.99
SLC28A1-203ENST00000394573 SPINK13Q1W4C9 94 aa8.89□□□□□ -0.99
SLC28A1-203ENST00000394573 TRBV7-4A0A0J9YYF1 115 aa8.88□□□□□ -0.99
SLC28A1-203ENST00000394573 Q8N9W7 124 aa8.88□□□□□ -0.99
SLC28A1-203ENST00000394573 SPTAN1Q13813 2472 aaKnown RBP8.88□□□□□ -0.99
SLC28A1-203ENST00000394573 CSMD2Q7Z408 3487 aa8.88□□□□□ -0.99
SLC28A1-203ENST00000394573 TMEM254Q8TBM7 123 aa8.88□□□□□ -0.99
SLC28A1-203ENST00000394573 LPAL2Q16609 132 aa8.87□□□□□ -0.99
SLC28A1-203ENST00000394573 TECTAO75443 2155 aa8.87□□□□□ -0.99
SLC28A1-203ENST00000394573 IGLV5-45A0A087WSX0 123 aa8.87□□□□□ -0.99
SLC28A1-203ENST00000394573 TRBV10-3A0A0K0K1G6 114 aa8.87□□□□□ -0.99
SLC28A1-203ENST00000394573 ZNF561-AS1K7EIQ3 104 aa8.87□□□□□ -0.99
SLC28A1-203ENST00000394573 PF4P02776 101 aa8.87□□□□□ -0.99
SLC28A1-203ENST00000394573 PRB2P02812 416 aaPredicted RBP8.87□□□□□ -0.99
SLC28A1-203ENST00000394573 CCL18P55774 89 aa8.87□□□□□ -0.99
SLC28A1-203ENST00000394573 ZNF843Q8N446 348 aa8.87□□□□□ -0.99
SLC28A1-203ENST00000394573 FDCSPQ8NFU4 85 aa8.87□□□□□ -0.99
SLC28A1-203ENST00000394573 MRPL55Q7Z7F7 128 aaKnown RBP8.86□□□□□ -0.99
SLC28A1-203ENST00000394573 IBA57-AS1B1ANH7 110 aa8.86□□□□□ -0.99
SLC28A1-203ENST00000394573 NDUFC1O43677 76 aa8.86□□□□□ -0.99
SLC28A1-203ENST00000394573 NREPQ16612 68 aa8.85□□□□□ -0.99
SLC28A1-203ENST00000394573 IGKV3OR2-268A0A0C4DH90 116 aa8.85□□□□□ -0.99
SLC28A1-203ENST00000394573 FUSP35637 526 aaKnown RBP eCLIP8.85□□□□□ -0.99
SLC28A1-203ENST00000394573 JMJD7-PLA2G4BH0Y9G9 81 aa8.84□□□□□ -0.99
SLC28A1-203ENST00000394573 ATP5EP56381 51 aaPredicted RBP8.84□□□□□ -0.99
SLC28A1-203ENST00000394573 Q6ZVQ6 151 aa8.84□□□□□ -0.99
SLC28A1-203ENST00000394573 FAM215AQ9Y5M1 114 aa8.84□□□□□ -0.99
SLC28A1-203ENST00000394573 MAP1AP78559 2803 aaPredicted RBP8.84□□□□□ -0.99
SLC28A1-203ENST00000394573 TRBV10-1A0A0K0K1A3 114 aa8.84□□□□□ -0.99
SLC28A1-203ENST00000394573 K7EQG2 157 aa8.84□□□□□ -0.99
SLC28A1-203ENST00000394573 RHPN1-AS1Q9BWJ2 59 aa8.84□□□□□ -0.99
SLC28A1-203ENST00000394573 MINOS1Q5TGZ0 78 aa8.84□□□□□ -1
SLC28A1-203ENST00000394573 PRR3P79522 188 aaKnown RBP8.83□□□□□ -1
SLC28A1-203ENST00000394573 C4orf48Q5BLP8 95 aa8.83□□□□□ -1
SLC28A1-203ENST00000394573 IGFL3Q6UXB1 125 aa8.83□□□□□ -1
SLC28A1-203ENST00000394573 Q8N6K4 173 aa8.83□□□□□ -1
SLC28A1-203ENST00000394573 ODF3BA8MYP8 253 aa8.83□□□□□ -1
SLC28A1-203ENST00000394573 GRNP28799 593 aaKnown RBP8.83□□□□□ -1
SLC28A1-203ENST00000394573 Q6ZRP5 223 aa8.82□□□□□ -1
SLC28A1-203ENST00000394573 Q8N9L7 120 aa8.82□□□□□ -1
SLC28A1-203ENST00000394573 C11orf45Q8TAV5 145 aa8.82□□□□□ -1
SLC28A1-203ENST00000394573 RBM12B-AS1Q9P1G2 102 aa8.82□□□□□ -1
SLC28A1-203ENST00000394573 LINC01356Q8N9X3 169 aa8.81□□□□□ -1
SLC28A1-203ENST00000394573 HIGD2AQ9BW72 106 aa8.8□□□□□ -1
SLC28A1-203ENST00000394573 E7EQL1 145 aa8.8□□□□□ -1
SLC28A1-203ENST00000394573 PRYO14603 147 aa8.8□□□□□ -1
SLC28A1-203ENST00000394573 C19orf54Q5BKX5 351 aa8.8□□□□□ -1
SLC28A1-203ENST00000394573 Q6ZTC4 211 aa8.8□□□□□ -1
SLC28A1-203ENST00000394573 C1orf158Q8N1D5 194 aa8.8□□□□□ -1
SLC28A1-203ENST00000394573 Q8N814 137 aa8.8□□□□□ -1
SLC28A1-203ENST00000394573 COX7B2Q8TF08 81 aa8.8□□□□□ -1
SLC28A1-203ENST00000394573 CRYBG3Q68DQ2 2970 aa8.8□□□□□ -1
SLC28A1-203ENST00000394573 EP300Q09472 2414 aaPredicted RBP8.8□□□□□ -1
SLC28A1-203ENST00000394573 BCE1O60756 84 aa8.79□□□□□ -1
SLC28A1-203ENST00000394573 PRO3102Q9H379 93 aa8.79□□□□□ -1
SLC28A1-203ENST00000394573 LAMTOR3Q9UHA4 124 aa8.79□□□□□ -1
SLC28A1-203ENST00000394573 TMEM256-PLSCR3K7ERE1 68 aa8.78□□□□□ -1
SLC28A1-203ENST00000394573 SPATA3Q8NHX4 192 aa8.78□□□□□ -1
SLC28A1-203ENST00000394573 A0A096LNT2 108 aa8.78□□□□□ -1
SLC28A1-203ENST00000394573 BPY2O14599 106 aa8.78□□□□□ -1
SLC28A1-203ENST00000394573 Q6ZQT0 140 aa8.78□□□□□ -1
SLC28A1-203ENST00000394573 NANOS2P60321 138 aaKnown RBP8.78□□□□□ -1
SLC28A1-203ENST00000394573 A8MTW9 85 aa8.77□□□□□ -1.01
SLC28A1-203ENST00000394573 GNLYP22749 145 aa8.77□□□□□ -1.01
SLC28A1-203ENST00000394573 PRR4Q16378 134 aa8.76□□□□□ -1.01
SLC28A1-203ENST00000394573 CUL9Q8IWT3 2517 aa8.76□□□□□ -1.01
SLC28A1-203ENST00000394573 STHQ8IWL8 128 aa8.75□□□□□ -1.01
SLC28A1-203ENST00000394573 RIF1Q5UIP0 2472 aaKnown RBP8.74□□□□□ -1.01
SLC28A1-203ENST00000394573 NBASA2RRP1 2371 aa8.74□□□□□ -1.01
SLC28A1-203ENST00000394573 NDUFA4O00483 81 aa8.74□□□□□ -1.01
SLC28A1-203ENST00000394573 TRAV22A0A0B4J277 110 aa8.73□□□□□ -1.01
SLC28A1-203ENST00000394573 A8MUN3 132 aa8.73□□□□□ -1.01
SLC28A1-203ENST00000394573 NTM-AS1Q6ZSK4 140 aa8.73□□□□□ -1.01
SLC28A1-203ENST00000394573 DYNLRB2Q8TF09 96 aa8.73□□□□□ -1.01
SLC28A1-203ENST00000394573 TRBV6-4A0A1B0GX49 114 aa8.73□□□□□ -1.01
SLC28A1-203ENST00000394573 SPTSSBQ8NFR3 76 aa8.73□□□□□ -1.01
SLC28A1-203ENST00000394573 hDV103S1A0JD37 113 aa8.73□□□□□ -1.01
SLC28A1-203ENST00000394573 ANKHD1Q8IWZ3 2542 aaKnown RBP8.72□□□□□ -1.01
SLC28A1-203ENST00000394573 Q8NA96 180 aa8.72□□□□□ -1.01
SLC28A1-203ENST00000394573 C1orf64Q8NEQ6 169 aa8.72□□□□□ -1.01
SLC28A1-203ENST00000394573 ADORA2A-AS1P86434 159 aa8.71□□□□□ -1.01
SLC28A1-203ENST00000394573 CD164L2Q6UWJ8 174 aa8.71□□□□□ -1.01
SLC28A1-203ENST00000394573 LINC01006Q8NI28 216 aa8.71□□□□□ -1.02
SLC28A1-203ENST00000394573 LINC00167Q96N53 147 aa8.71□□□□□ -1.02
SLC28A1-203ENST00000394573 C6orf99Q4VX62 202 aa8.7□□□□□ -1.02
SLC28A1-203ENST00000394573 DEFB123Q8N688 67 aa8.7□□□□□ -1.02
SLC28A1-203ENST00000394573 CELA1Q9UNI1 258 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms