RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 RBMY1CP0DJD4 496 aa13.49□□□□□ -0.25
HOXC6-202ENST00000394331 RBMY1FQ15415 496 aaKnown RBP13.49□□□□□ -0.25
HOXC6-202ENST00000394331 CELSR1Q9NYQ6 3014 aa13.49□□□□□ -0.25
HOXC6-202ENST00000394331 ZFHX3Q15911 3703 aa13.48□□□□□ -0.25
HOXC6-202ENST00000394331 LYPD5Q6UWN5 251 aa13.48□□□□□ -0.25
HOXC6-202ENST00000394331 COX6A2Q02221 97 aa13.47□□□□□ -0.25
HOXC6-202ENST00000394331 PIEZO1Q92508 2521 aa13.47□□□□□ -0.25
HOXC6-202ENST00000394331 A0A087WYN8 130 aa13.47□□□□□ -0.25
HOXC6-202ENST00000394331 LINC00242Q5T6M2 205 aa13.47□□□□□ -0.25
HOXC6-202ENST00000394331 CCKP06307 115 aa13.46□□□□□ -0.25
HOXC6-202ENST00000394331 LINC00336Q6ZUF6 198 aa13.46□□□□□ -0.25
HOXC6-202ENST00000394331 IGHV4-31P0DP07 118 aa13.46□□□□□ -0.25
HOXC6-202ENST00000394331 CFAP46Q8IYW2 2715 aa13.46□□□□□ -0.26
HOXC6-202ENST00000394331 CACNA1AO00555 2505 aa13.46□□□□□ -0.26
HOXC6-202ENST00000394331 IGHV3OR16-12A0A075B7B8 117 aa13.45□□□□□ -0.26
HOXC6-202ENST00000394331 USP9XQ93008 2570 aaPredicted RBP13.45□□□□□ -0.26
HOXC6-202ENST00000394331 A0A0U1RRA0 63 aa13.45□□□□□ -0.26
HOXC6-202ENST00000394331 XCL1P47992 114 aa13.44□□□□□ -0.26
HOXC6-202ENST00000394331 XCL2Q9UBD3 114 aa13.44□□□□□ -0.26
HOXC6-202ENST00000394331 LINC00337Q8N6G1 96 aa13.44□□□□□ -0.26
HOXC6-202ENST00000394331 VPS13CQ709C8 3753 aa13.43□□□□□ -0.26
HOXC6-202ENST00000394331 IGKV2-28A0A075B6P5 120 aa13.42□□□□□ -0.26
HOXC6-202ENST00000394331 IGKV2D-28P01615 120 aa13.42□□□□□ -0.26
HOXC6-202ENST00000394331 PROK1P58294 105 aa13.42□□□□□ -0.26
HOXC6-202ENST00000394331 SMIM11BQ8TCY0 68 aa13.42□□□□□ -0.26
HOXC6-202ENST00000394331 H7BZZ5 65 aa13.42□□□□□ -0.26
HOXC6-202ENST00000394331 DEFB131AP59861 70 aa13.41□□□□□ -0.26
HOXC6-202ENST00000394331 KNCNA6PVL3 124 aa13.41□□□□□ -0.26
HOXC6-202ENST00000394331 A8MTW9 85 aa13.41□□□□□ -0.26
HOXC6-202ENST00000394331 SLURP1P55000 103 aa13.41□□□□□ -0.26
HOXC6-202ENST00000394331 DGAT2L7PQ6IED9 249 aa13.41□□□□□ -0.26
HOXC6-202ENST00000394331 SMIM26A0A096LP01 95 aa13.4□□□□□ -0.26
HOXC6-202ENST00000394331 IGHV3-73A0A0B4J1V6 119 aa13.4□□□□□ -0.26
HOXC6-202ENST00000394331 C20orf197Q8N268 126 aa13.4□□□□□ -0.26
HOXC6-202ENST00000394331 C16orf95Q9H693 158 aa13.4□□□□□ -0.27
HOXC6-202ENST00000394331 NCR3O14931 201 aa13.39□□□□□ -0.27
HOXC6-202ENST00000394331 HILS1P60008 231 aa13.39□□□□□ -0.27
HOXC6-202ENST00000394331 IGHV3-53P01767 116 aa13.39□□□□□ -0.27
HOXC6-202ENST00000394331 JMJD7-PLA2G4BH0Y9G9 81 aa13.38□□□□□ -0.27
HOXC6-202ENST00000394331 KLKP1Q107X0 134 aa13.38□□□□□ -0.27
HOXC6-202ENST00000394331 SS18Q15532 418 aa13.38□□□□□ -0.27
HOXC6-202ENST00000394331 DEFB136Q30KP8 78 aa13.38□□□□□ -0.27
HOXC6-202ENST00000394331 SND1-IT1Q9HBX3 110 aa13.38□□□□□ -0.27
HOXC6-202ENST00000394331 FLNCQ14315 2725 aa13.38□□□□□ -0.27
HOXC6-202ENST00000394331 IGSF10Q6WRI0 2623 aa13.38□□□□□ -0.27
HOXC6-202ENST00000394331 PRB1P04280 392 aa13.38□□□□□ -0.27
HOXC6-202ENST00000394331 TRAV7A0A075B6U4 112 aa13.37□□□□□ -0.27
HOXC6-202ENST00000394331 TMEM86BQ8N661 226 aa13.37□□□□□ -0.27
HOXC6-202ENST00000394331 ORMDL1Q9P0S3 153 aa13.37□□□□□ -0.27
HOXC6-202ENST00000394331 HTN1P15515 57 aa13.37□□□□□ -0.27
HOXC6-202ENST00000394331 DEFB113Q30KQ7 82 aa13.37□□□□□ -0.27
HOXC6-202ENST00000394331 C18orf65Q6ZTR6 163 aa13.37□□□□□ -0.27
HOXC6-202ENST00000394331 LINC00167Q96N53 147 aa13.37□□□□□ -0.27
HOXC6-202ENST00000394331 C1orf43Q9BWL3 253 aa13.37□□□□□ -0.27
HOXC6-202ENST00000394331 TRAV23DV6A0A075B6W5 121 aa13.36□□□□□ -0.27
HOXC6-202ENST00000394331 LECT2O14960 151 aa13.36□□□□□ -0.27
HOXC6-202ENST00000394331 Q6ZSN1 163 aa13.36□□□□□ -0.27
HOXC6-202ENST00000394331 DOPEY2Q9Y3R5 2298 aa13.36□□□□□ -0.27
HOXC6-202ENST00000394331 USP9YO00507 2555 aaPredicted RBP13.36□□□□□ -0.27
HOXC6-202ENST00000394331 ACACBO00763 2458 aa13.36□□□□□ -0.27
HOXC6-202ENST00000394331 C4orf3Q8WVX3 66 aa13.36□□□□□ -0.27
HOXC6-202ENST00000394331 Q9UF83 564 aa13.36□□□□□ -0.27
HOXC6-202ENST00000394331 MIR7-3HGQ8N6C7 128 aa13.35□□□□□ -0.27
HOXC6-202ENST00000394331 KRTAP10-9P60411 292 aa13.34□□□□□ -0.27
HOXC6-202ENST00000394331 MAP1AP78559 2803 aaPredicted RBP13.33□□□□□ -0.27
HOXC6-202ENST00000394331 DYNLRB2Q8TF09 96 aa13.33□□□□□ -0.27
HOXC6-202ENST00000394331 CELSR2Q9HCU4 2923 aa13.33□□□□□ -0.28
HOXC6-202ENST00000394331 MYO18BQ8IUG5 2567 aa13.32□□□□□ -0.28
HOXC6-202ENST00000394331 ANKRD17O75179 2603 aaKnown RBP13.32□□□□□ -0.28
HOXC6-202ENST00000394331 KHDC1LQ5JSQ8 128 aa13.32□□□□□ -0.28
HOXC6-202ENST00000394331 SORL1Q92673 2214 aa13.32□□□□□ -0.28
HOXC6-202ENST00000394331 RPL35AP18077 110 aaKnown RBP13.32□□□□□ -0.28
HOXC6-202ENST00000394331 FP248Q71RG6 208 aaPredicted RBP13.32□□□□□ -0.28
HOXC6-202ENST00000394331 FAM19A1Q7Z5A9 133 aa13.32□□□□□ -0.28
HOXC6-202ENST00000394331 MAP6D1Q9H9H5 199 aa13.32□□□□□ -0.28
HOXC6-202ENST00000394331 IGHV3-38A0A0C4DH36 116 aa13.31□□□□□ -0.28
HOXC6-202ENST00000394331 LY6G6DO95868 133 aa13.31□□□□□ -0.28
HOXC6-202ENST00000394331 ENHOQ6UWT2 76 aa13.31□□□□□ -0.28
HOXC6-202ENST00000394331 CREBBPQ92793 2442 aa13.31□□□□□ -0.28
HOXC6-202ENST00000394331 Q96MF0 132 aa13.31□□□□□ -0.28
HOXC6-202ENST00000394331 ATP5EP56381 51 aaPredicted RBP13.3□□□□□ -0.28
HOXC6-202ENST00000394331 BBC3Q96PG8 261 aaPredicted RBP13.3□□□□□ -0.28
HOXC6-202ENST00000394331 UBL5Q9BZL1 73 aa13.3□□□□□ -0.28
HOXC6-202ENST00000394331 RPL36AP83881 106 aaKnown RBP13.29□□□□□ -0.28
HOXC6-202ENST00000394331 DEFB114Q30KQ6 69 aa13.29□□□□□ -0.28
HOXC6-202ENST00000394331 RPL36ALQ969Q0 106 aaKnown RBP13.29□□□□□ -0.28
HOXC6-202ENST00000394331 ZNF843Q8N446 348 aa13.29□□□□□ -0.28
HOXC6-202ENST00000394331 FAM208BQ5VWN6 2430 aa13.29□□□□□ -0.28
HOXC6-202ENST00000394331 CR1P17927 2039 aa13.28□□□□□ -0.28
HOXC6-202ENST00000394331 NDUFC1O43677 76 aa13.28□□□□□ -0.28
HOXC6-202ENST00000394331 INSP01308 110 aa13.28□□□□□ -0.28
HOXC6-202ENST00000394331 CCL18P55774 89 aa13.27□□□□□ -0.28
HOXC6-202ENST00000394331 WFDC9Q8NEX5 89 aa13.27□□□□□ -0.29
HOXC6-202ENST00000394331 COX7B2Q8TF08 81 aa13.27□□□□□ -0.29
HOXC6-202ENST00000394331 CDC42SE2Q9NRR3 84 aa13.27□□□□□ -0.29
HOXC6-202ENST00000394331 PRM2P04554 102 aa13.26□□□□□ -0.29
HOXC6-202ENST00000394331 C11orf72Q8NBR9 251 aa13.26□□□□□ -0.29
HOXC6-202ENST00000394331 TMEM256-PLSCR3K7ERE1 68 aa13.26□□□□□ -0.29
HOXC6-202ENST00000394331 POLQO75417 2590 aa13.25□□□□□ -0.29
HOXC6-202ENST00000394331 IBA57-AS1B1ANH7 110 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms