RNA–Protein interactions for RNA: ENST00000392557.8

BRF1-204, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-204ENST00000392557 DEFB114Q30KQ6 69 aa7.84□□□□□ -1.15
BRF1-204ENST00000392557 MAP6D1Q9H9H5 199 aa7.84□□□□□ -1.15
BRF1-204ENST00000392557 STHQ8IWL8 128 aa7.84□□□□□ -1.15
BRF1-204ENST00000392557 LINC01006Q8NI28 216 aa7.84□□□□□ -1.15
BRF1-204ENST00000392557 CHCHD7Q9BUK0 85 aa7.84□□□□□ -1.15
BRF1-204ENST00000392557 KRTAP1-1Q07627 177 aa7.84□□□□□ -1.16
BRF1-204ENST00000392557 TMEM86BQ8N661 226 aa7.84□□□□□ -1.16
BRF1-204ENST00000392557 NOTCH1P46531 2555 aa7.84□□□□□ -1.16
BRF1-204ENST00000392557 RBMY1BA6NDE4 496 aaKnown RBP7.83□□□□□ -1.16
BRF1-204ENST00000392557 RBMY1EA6NEQ0 496 aaKnown RBP7.83□□□□□ -1.16
BRF1-204ENST00000392557 RBMY1DP0C7P1 496 aaKnown RBP7.83□□□□□ -1.16
BRF1-204ENST00000392557 SEC61GP60059 68 aa7.83□□□□□ -1.16
BRF1-204ENST00000392557 COX6A2Q02221 97 aa7.83□□□□□ -1.16
BRF1-204ENST00000392557 LITAFQ99732 161 aa7.83□□□□□ -1.16
BRF1-204ENST00000392557 CHCHD5Q9BSY4 110 aa7.83□□□□□ -1.16
BRF1-204ENST00000392557 WFDC10AQ9H1F0 79 aa7.83□□□□□ -1.16
BRF1-204ENST00000392557 MAST4O15021 2626 aa7.83□□□□□ -1.16
BRF1-204ENST00000392557 H3BT86 120 aa7.82□□□□□ -1.16
BRF1-204ENST00000392557 OTOGQ6ZRI0 2925 aa7.82□□□□□ -1.16
BRF1-204ENST00000392557 RPL36AP83881 106 aaKnown RBP7.82□□□□□ -1.16
BRF1-204ENST00000392557 RPL36ALQ969Q0 106 aaKnown RBP7.82□□□□□ -1.16
BRF1-204ENST00000392557 SPANXDQ9BXN6 97 aa7.82□□□□□ -1.16
BRF1-204ENST00000392557 SPANXCQ9NY87 97 aa7.82□□□□□ -1.16
BRF1-204ENST00000392557 CSDC2Q9Y534 153 aaKnown RBP7.82□□□□□ -1.16
BRF1-204ENST00000392557 LST1O00453 97 aa7.82□□□□□ -1.16
BRF1-204ENST00000392557 TRGV2A0A075B6R0 118 aa7.81□□□□□ -1.16
BRF1-204ENST00000392557 F5H768 121 aa7.81□□□□□ -1.16
BRF1-204ENST00000392557 PIK3CD-AS1Q5SR53 167 aa7.81□□□□□ -1.16
BRF1-204ENST00000392557 LINC00308Q8TCZ7 52 aa7.81□□□□□ -1.16
BRF1-204ENST00000392557 C11orf68Q9H3H3 251 aaKnown RBP7.81□□□□□ -1.16
BRF1-204ENST00000392557 RS1O15537 224 aa7.81□□□□□ -1.16
BRF1-204ENST00000392557 MGAM2Q2M2H8 2515 aa7.81□□□□□ -1.16
BRF1-204ENST00000392557 RPL35AP18077 110 aaKnown RBP7.81□□□□□ -1.16
BRF1-204ENST00000392557 HERVK_113P63121 156 aa7.81□□□□□ -1.16
BRF1-204ENST00000392557 LINC00694P0DN24 101 aa7.8□□□□□ -1.16
BRF1-204ENST00000392557 GAGE2AQ6NT46 116 aa7.8□□□□□ -1.16
BRF1-204ENST00000392557 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.8□□□□□ -1.16
BRF1-204ENST00000392557 Q9HAA7 133 aa7.8□□□□□ -1.16
BRF1-204ENST00000392557 TENM1Q9UKZ4 2725 aa7.8□□□□□ -1.16
BRF1-204ENST00000392557 OR13C6PQ8NH95 151 aa7.8□□□□□ -1.16
BRF1-204ENST00000392557 DNAL4O96015 105 aa7.8□□□□□ -1.16
BRF1-204ENST00000392557 NHLRC4P0CG21 123 aaPredicted RBP7.8□□□□□ -1.16
BRF1-204ENST00000392557 LINC00158P58513 81 aa7.8□□□□□ -1.16
BRF1-204ENST00000392557 FAM236AA0A1B0GUQ0 79 aa7.79□□□□□ -1.16
BRF1-204ENST00000392557 FAM236BA0A1B0GV22 79 aa7.79□□□□□ -1.16
BRF1-204ENST00000392557 SMIM9A6NGZ8 99 aa7.79□□□□□ -1.16
BRF1-204ENST00000392557 BAALC-AS2P0C853 105 aa7.79□□□□□ -1.16
BRF1-204ENST00000392557 ODF3L2Q3SX64 289 aa7.79□□□□□ -1.16
BRF1-204ENST00000392557 FAM104AQ969W3 186 aa7.79□□□□□ -1.16
BRF1-204ENST00000392557 NDUFA1O15239 70 aa7.79□□□□□ -1.16
BRF1-204ENST00000392557 Q6ZTI0 123 aa7.79□□□□□ -1.16
BRF1-204ENST00000392557 NOP10Q9NPE3 64 aaKnown RBP7.79□□□□□ -1.16
BRF1-204ENST00000392557 NSD1Q96L73 2696 aaPredicted RBP7.78□□□□□ -1.16
BRF1-204ENST00000392557 LINC00242Q5T6M2 205 aa7.78□□□□□ -1.16
BRF1-204ENST00000392557 COPS9Q8WXC6 57 aa7.78□□□□□ -1.16
BRF1-204ENST00000392557 RNASE1P07998 156 aaKnown RBP7.78□□□□□ -1.16
BRF1-204ENST00000392557 PFN2P35080 140 aa7.78□□□□□ -1.16
BRF1-204ENST00000392557 LY6G6DO95868 133 aa7.77□□□□□ -1.16
BRF1-204ENST00000392557 DAZ2Q13117 558 aaKnown RBP7.77□□□□□ -1.16
BRF1-204ENST00000392557 DAZ4Q86SG3 579 aaKnown RBP7.77□□□□□ -1.16
BRF1-204ENST00000392557 DAZ3Q9NR90 486 aaKnown RBP7.77□□□□□ -1.16
BRF1-204ENST00000392557 STAB1Q9NY15 2570 aa7.77□□□□□ -1.17
BRF1-204ENST00000392557 WIPF1O43516 503 aa7.77□□□□□ -1.17
BRF1-204ENST00000392557 CRPP02741 224 aa7.77□□□□□ -1.17
BRF1-204ENST00000392557 DNAJC30Q96LL9 226 aa7.77□□□□□ -1.17
BRF1-204ENST00000392557 INAFM1C9JVW0 142 aa7.76□□□□□ -1.17
BRF1-204ENST00000392557 COX7A2LO14548 114 aa7.76□□□□□ -1.17
BRF1-204ENST00000392557 A0A096LPF7 62 aa7.76□□□□□ -1.17
BRF1-204ENST00000392557 TRGV4A0A0C4DH28 118 aa7.76□□□□□ -1.17
BRF1-204ENST00000392557 PF4P02776 101 aa7.76□□□□□ -1.17
BRF1-204ENST00000392557 ANK3Q12955 4377 aaKnown RBP7.76□□□□□ -1.17
BRF1-204ENST00000392557 TIRAPP58753 221 aa7.75□□□□□ -1.17
BRF1-204ENST00000392557 HILS1P60008 231 aa7.75□□□□□ -1.17
BRF1-204ENST00000392557 PAX4O43316 350 aa7.75□□□□□ -1.17
BRF1-204ENST00000392557 SMIM1B2RUZ4 78 aa7.75□□□□□ -1.17
BRF1-204ENST00000392557 K7EQD1 137 aa7.75□□□□□ -1.17
BRF1-204ENST00000392557 MIR7-3HGQ8N6C7 128 aa7.75□□□□□ -1.17
BRF1-204ENST00000392557 SOSTDC1Q6X4U4 206 aa7.74□□□□□ -1.17
BRF1-204ENST00000392557 C11orf72Q8NBR9 251 aa7.74□□□□□ -1.17
BRF1-204ENST00000392557 TMEM243Q9BU79 118 aa7.74□□□□□ -1.17
BRF1-204ENST00000392557 FBN1P35555 2871 aaKnown RBP7.74□□□□□ -1.17
BRF1-204ENST00000392557 LOC100131303A0A0U1RQF7 123 aa7.74□□□□□ -1.17
BRF1-204ENST00000392557 TIMM17BO60830 172 aa7.74□□□□□ -1.17
BRF1-204ENST00000392557 C5orf38Q86SI9 138 aa7.74□□□□□ -1.17
BRF1-204ENST00000392557 ATP5G1P05496 136 aa7.73□□□□□ -1.17
BRF1-204ENST00000392557 SND1-IT1Q9HBX3 110 aa7.73□□□□□ -1.17
BRF1-204ENST00000392557 DEFB4AO15263 64 aa7.73□□□□□ -1.17
BRF1-204ENST00000392557 C1orf43Q9BWL3 253 aa7.73□□□□□ -1.17
BRF1-204ENST00000392557 C9orf153Q5TBE3 101 aa7.72□□□□□ -1.17
BRF1-204ENST00000392557 Q6Q795 121 aa7.72□□□□□ -1.17
BRF1-204ENST00000392557 DEFB130BP0DP73 79 aa7.71□□□□□ -1.17
BRF1-204ENST00000392557 DEFB130AP0DP74 79 aa7.71□□□□□ -1.17
BRF1-204ENST00000392557 CLPSL2Q6UWE3 100 aa7.71□□□□□ -1.17
BRF1-204ENST00000392557 TRRAPQ9Y4A5 3859 aa7.71□□□□□ -1.17
BRF1-204ENST00000392557 NTM-AS1Q6ZSK4 140 aa7.71□□□□□ -1.18
BRF1-204ENST00000392557 C1orf158Q8N1D5 194 aa7.71□□□□□ -1.18
BRF1-204ENST00000392557 COX7B2Q8TF08 81 aa7.7□□□□□ -1.18
BRF1-204ENST00000392557 FAM218AQ96MZ4 157 aa7.7□□□□□ -1.18
BRF1-204ENST00000392557 C16orf95Q9H693 158 aa7.7□□□□□ -1.18
BRF1-204ENST00000392557 EDA2RQ9HAV5 297 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms