RNA–Protein interactions for RNA: ENST00000391970.3

PTPRC-205, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-205ENST00000391970 PCNX2A6NKB5 2137 aa1.48□□□□□ -2.17
PTPRC-205ENST00000391970 FREM3P0C091 2139 aa1.48□□□□□ -2.17
PTPRC-205ENST00000391970 IGKV1D-42A0A075B6H8 117 aa1.48□□□□□ -2.17
PTPRC-205ENST00000391970 IGLV3-9A0A075B6K5 115 aa1.48□□□□□ -2.17
PTPRC-205ENST00000391970 TMEM30CPA0ZSE6 113 aa1.48□□□□□ -2.17
PTPRC-205ENST00000391970 M0R135 149 aa1.48□□□□□ -2.17
PTPRC-205ENST00000391970 COX7A2LO14548 114 aa1.48□□□□□ -2.17
PTPRC-205ENST00000391970 TFF3Q07654 80 aa1.48□□□□□ -2.17
PTPRC-205ENST00000391970 FXYD3Q14802 87 aa1.48□□□□□ -2.17
PTPRC-205ENST00000391970 DEFB114Q30KQ6 69 aa1.48□□□□□ -2.17
PTPRC-205ENST00000391970 FAM229BQ4G0N7 80 aa1.48□□□□□ -2.17
PTPRC-205ENST00000391970 Q5VV11 94 aa1.48□□□□□ -2.17
PTPRC-205ENST00000391970 ZNF833PQ6ZTB9 187 aa1.48□□□□□ -2.17
PTPRC-205ENST00000391970 GPHB5Q86YW7 130 aa1.48□□□□□ -2.17
PTPRC-205ENST00000391970 C20orf197Q8N268 126 aa1.48□□□□□ -2.17
PTPRC-205ENST00000391970 SPTSSAQ969W0 71 aa1.48□□□□□ -2.17
PTPRC-205ENST00000391970 B9D2Q9BPU9 175 aa1.48□□□□□ -2.17
PTPRC-205ENST00000391970 NABP2Q9BQ15 211 aa1.48□□□□□ -2.17
PTPRC-205ENST00000391970 TTTY13Q9BZ97 58 aa1.48□□□□□ -2.17
PTPRC-205ENST00000391970 PHLDA3Q9Y5J5 127 aa1.48□□□□□ -2.17
PTPRC-205ENST00000391970 POLEQ07864 2286 aa1.48□□□□□ -2.17
PTPRC-205ENST00000391970 NAV2Q8IVL1 2488 aa1.48□□□□□ -2.17
PTPRC-205ENST00000391970 SDK2Q58EX2 2172 aa1.48□□□□□ -2.17
PTPRC-205ENST00000391970 A0A0C4DFX4 3053 aa1.48□□□□□ -2.17
PTPRC-205ENST00000391970 SETD2Q9BYW2 2564 aaPredicted RBP1.47□□□□□ -2.17
PTPRC-205ENST00000391970 TMSB15BA0A087X1C1 80 aa1.47□□□□□ -2.17
PTPRC-205ENST00000391970 A6NED7 52 aa1.47□□□□□ -2.17
PTPRC-205ENST00000391970 F8WEM9 126 aa1.47□□□□□ -2.17
PTPRC-205ENST00000391970 LY6HO94772 140 aa1.47□□□□□ -2.17
PTPRC-205ENST00000391970 CTSGP08311 255 aa1.47□□□□□ -2.17
PTPRC-205ENST00000391970 COX6CP09669 75 aa1.47□□□□□ -2.17
PTPRC-205ENST00000391970 MP68P56378 58 aa1.47□□□□□ -2.17
PTPRC-205ENST00000391970 HCP5Q6MZN7 132 aa1.47□□□□□ -2.17
PTPRC-205ENST00000391970 FAM19A3Q7Z5A8 133 aa1.47□□□□□ -2.17
PTPRC-205ENST00000391970 Q86TA4 180 aa1.47□□□□□ -2.17
PTPRC-205ENST00000391970 TET1Q8NFU7 2136 aa1.47□□□□□ -2.17
PTPRC-205ENST00000391970 CDC42SE1Q9NRR8 79 aa1.47□□□□□ -2.17
PTPRC-205ENST00000391970 PLAC8Q9NZF1 115 aa1.47□□□□□ -2.17
PTPRC-205ENST00000391970 PCLOQ9Y6V0 5065 aa1.46□□□□□ -2.18
PTPRC-205ENST00000391970 IGKV1D-37A0A075B6S9 117 aa1.46□□□□□ -2.18
PTPRC-205ENST00000391970 TRAV22A0A0B4J277 110 aa1.46□□□□□ -2.18
PTPRC-205ENST00000391970 A0A1B0GU33 70 aa1.46□□□□□ -2.18
PTPRC-205ENST00000391970 ZNF815PA8K554 130 aa1.46□□□□□ -2.18
PTPRC-205ENST00000391970 C17orf98A8MV24 154 aa1.46□□□□□ -2.18
PTPRC-205ENST00000391970 H3BVH4 76 aa1.46□□□□□ -2.18
PTPRC-205ENST00000391970 FUSP35637 526 aaKnown RBP eCLIP1.46□□□□□ -2.18
PTPRC-205ENST00000391970 RPL27AP46776 148 aaKnown RBP1.46□□□□□ -2.18
PTPRC-205ENST00000391970 RPL28P46779 137 aaKnown RBP1.46□□□□□ -2.18
PTPRC-205ENST00000391970 SPINT3P49223 89 aa1.46□□□□□ -2.18
PTPRC-205ENST00000391970 ELOF1P60002 83 aaKnown RBP1.46□□□□□ -2.18
PTPRC-205ENST00000391970 RBM3P98179 157 aaKnown RBP1.46□□□□□ -2.18
PTPRC-205ENST00000391970 SPANXN1Q5VSR9 72 aa1.46□□□□□ -2.18
PTPRC-205ENST00000391970 Q8N6K4 173 aa1.46□□□□□ -2.18
PTPRC-205ENST00000391970 Q8NAQ8 132 aa1.46□□□□□ -2.18
PTPRC-205ENST00000391970 MUC7Q8TAX7 377 aa1.46□□□□□ -2.18
PTPRC-205ENST00000391970 ZCCHC13Q8WW36 166 aaKnown RBP1.46□□□□□ -2.18
PTPRC-205ENST00000391970 Q9BRP9 147 aa1.46□□□□□ -2.18
PTPRC-205ENST00000391970 LIMD2Q9BT23 127 aa1.46□□□□□ -2.18
PTPRC-205ENST00000391970 TTTY10Q9BZA0 68 aa1.46□□□□□ -2.18
PTPRC-205ENST00000391970 BPESC1Q9GZL8 116 aa1.46□□□□□ -2.18
PTPRC-205ENST00000391970 XAGE1AQ9HD64 81 aa1.46□□□□□ -2.18
PTPRC-205ENST00000391970 CDC42SE2Q9NRR3 84 aa1.46□□□□□ -2.18
PTPRC-205ENST00000391970 HEATR1Q9H583 2144 aaKnown RBP1.46□□□□□ -2.18
PTPRC-205ENST00000391970 DOPEY1Q5JWR5 2465 aa1.46□□□□□ -2.18
PTPRC-205ENST00000391970 FLNBO75369 2602 aaKnown RBP1.46□□□□□ -2.18
PTPRC-205ENST00000391970 KIAA1109Q2LD37 5005 aa1.45□□□□□ -2.18
PTPRC-205ENST00000391970 MYOFQ9NZM1 2061 aa1.45□□□□□ -2.18
PTPRC-205ENST00000391970 HEATR5BQ9P2D3 2071 aa1.45□□□□□ -2.18
PTPRC-205ENST00000391970 IGLV10-54A0A075B6I4 117 aa1.45□□□□□ -2.18
PTPRC-205ENST00000391970 D6R8Y8 96 aa1.45□□□□□ -2.18
PTPRC-205ENST00000391970 CCL22O00626 93 aa1.45□□□□□ -2.18
PTPRC-205ENST00000391970 PPP1R17O96001 155 aa1.45□□□□□ -2.18
PTPRC-205ENST00000391970 IGKV1-16P04430 117 aa1.45□□□□□ -2.18
PTPRC-205ENST00000391970 PRM2P04554 102 aa1.45□□□□□ -2.18
PTPRC-205ENST00000391970 ARMS2P0C7Q2 107 aa1.45□□□□□ -2.18
PTPRC-205ENST00000391970 SPANXN5Q5MJ07 72 aa1.45□□□□□ -2.18
PTPRC-205ENST00000391970 LINC00269Q8N2A0 174 aa1.45□□□□□ -2.18
PTPRC-205ENST00000391970 TMEM254Q8TBM7 123 aa1.45□□□□□ -2.18
PTPRC-205ENST00000391970 TMEM141Q96I45 108 aa1.45□□□□□ -2.18
PTPRC-205ENST00000391970 LINC00467Q9BRT7 94 aa1.45□□□□□ -2.18
PTPRC-205ENST00000391970 LINC00846Q9NV44 126 aa1.45□□□□□ -2.18
PTPRC-205ENST00000391970 TMEM14CQ9P0S9 112 aa1.45□□□□□ -2.18
PTPRC-205ENST00000391970 MED12Q93074 2177 aa1.45□□□□□ -2.18
PTPRC-205ENST00000391970 HELZ2Q9BYK8 2649 aaKnown RBP1.45□□□□□ -2.18
PTPRC-205ENST00000391970 CHD6Q8TD26 2715 aa1.44□□□□□ -2.18
PTPRC-205ENST00000391970 A0A087WVE0 104 aa1.44□□□□□ -2.18
PTPRC-205ENST00000391970 TRBV6-8A0A0A6YYG3 113 aa1.44□□□□□ -2.18
PTPRC-205ENST00000391970 LEPROTO15243 131 aa1.44□□□□□ -2.18
PTPRC-205ENST00000391970 PSCAO43653 123 aa1.44□□□□□ -2.18
PTPRC-205ENST00000391970 SPINK4O60575 86 aa1.44□□□□□ -2.18
PTPRC-205ENST00000391970 DNAL4O96015 105 aa1.44□□□□□ -2.18
PTPRC-205ENST00000391970 IGHV1-69P01742 117 aa1.44□□□□□ -2.18
PTPRC-205ENST00000391970 IAPPP10997 89 aa1.44□□□□□ -2.18
PTPRC-205ENST00000391970 DEFA4P12838 97 aa1.44□□□□□ -2.18
PTPRC-205ENST00000391970 TSPEAR-AS2P59090 65 aa1.44□□□□□ -2.18
PTPRC-205ENST00000391970 PDE6HQ13956 83 aa1.44□□□□□ -2.18
PTPRC-205ENST00000391970 CIRBPQ14011 172 aaKnown RBP1.44□□□□□ -2.18
PTPRC-205ENST00000391970 MIAQ16674 131 aa1.44□□□□□ -2.18
PTPRC-205ENST00000391970 LINC00322Q6ZN03 302 aaPredicted RBP1.44□□□□□ -2.18
PTPRC-205ENST00000391970 CLEC2BQ92478 149 aa1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms