RNA–Protein interactions for RNA: ENST00000391303.1

RNU1-56P-201, Transcript of RNA, U1 small nuclear 56, pseudogene, humanhuman

BASIC

Gene RNU1-56P, Length 164 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-56P-201ENST00000391303 ODF1Q14990 250 aa4.4□□□□□ -1.71
RNU1-56P-201ENST00000391303 Q6ZUT4 128 aa4.4□□□□□ -1.71
RNU1-56P-201ENST00000391303 LINC01561Q8N1V8 128 aa4.4□□□□□ -1.71
RNU1-56P-201ENST00000391303 IMMP2LQ96T52 175 aa4.4□□□□□ -1.71
RNU1-56P-201ENST00000391303 MT-ND4LP03901 98 aa4.39□□□□□ -1.71
RNU1-56P-201ENST00000391303 SPAG11BQ08648 103 aa4.39□□□□□ -1.71
RNU1-56P-201ENST00000391303 SRSF9Q13242 221 aaKnown RBP eCLIP4.39□□□□□ -1.71
RNU1-56P-201ENST00000391303 MRPL54Q6P161 138 aaKnown RBP4.39□□□□□ -1.71
RNU1-56P-201ENST00000391303 TMEM136Q6ZRR5 245 aa4.39□□□□□ -1.71
RNU1-56P-201ENST00000391303 ANAPC16Q96DE5 110 aa4.39□□□□□ -1.71
RNU1-56P-201ENST00000391303 A0A087WZ39 114 aa4.38□□□□□ -1.71
RNU1-56P-201ENST00000391303 TGIF2-C20orf24A0A0A6YYL0 155 aa4.38□□□□□ -1.71
RNU1-56P-201ENST00000391303 A0A0J9YXV3 536 aa4.38□□□□□ -1.71
RNU1-56P-201ENST00000391303 IFITM10A6NMD0 228 aa4.38□□□□□ -1.71
RNU1-56P-201ENST00000391303 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.38□□□□□ -1.71
RNU1-56P-201ENST00000391303 NDUFA1O15239 70 aa4.38□□□□□ -1.71
RNU1-56P-201ENST00000391303 NPYP01303 97 aa4.38□□□□□ -1.71
RNU1-56P-201ENST00000391303 RAB14P61106 215 aa4.38□□□□□ -1.71
RNU1-56P-201ENST00000391303 SRSF3P84103 164 aaKnown RBP4.38□□□□□ -1.71
RNU1-56P-201ENST00000391303 GAGE2BQ13066 116 aa4.38□□□□□ -1.71
RNU1-56P-201ENST00000391303 PAPPA-AS1Q5QFB9 102 aa4.38□□□□□ -1.71
RNU1-56P-201ENST00000391303 C5orf38Q86SI9 138 aa4.38□□□□□ -1.71
RNU1-56P-201ENST00000391303 LINC00526Q96FQ7 95 aa4.38□□□□□ -1.71
RNU1-56P-201ENST00000391303 PRELID3AQ96N28 172 aa4.38□□□□□ -1.71
RNU1-56P-201ENST00000391303 A0A1B0GVG6 124 aa4.37□□□□□ -1.71
RNU1-56P-201ENST00000391303 LINC01549A6NIU2 74 aa4.37□□□□□ -1.71
RNU1-56P-201ENST00000391303 RPL39P62891 51 aaKnown RBP4.37□□□□□ -1.71
RNU1-56P-201ENST00000391303 SEC11AP67812 179 aa4.37□□□□□ -1.71
RNU1-56P-201ENST00000391303 ORMDL2Q53FV1 153 aa4.37□□□□□ -1.71
RNU1-56P-201ENST00000391303 C9orf116Q5BN46 136 aaPredicted RBP4.37□□□□□ -1.71
RNU1-56P-201ENST00000391303 Q6ZN92 141 aa4.37□□□□□ -1.71
RNU1-56P-201ENST00000391303 ORAOV1Q8WV07 137 aa4.37□□□□□ -1.71
RNU1-56P-201ENST00000391303 FAM104AQ969W3 186 aa4.37□□□□□ -1.71
RNU1-56P-201ENST00000391303 TMEM141Q96I45 108 aa4.37□□□□□ -1.71
RNU1-56P-201ENST00000391303 C2orf88Q9BSF0 95 aa4.37□□□□□ -1.71
RNU1-56P-201ENST00000391303 MAP1LC3AQ9H492 121 aa4.37□□□□□ -1.71
RNU1-56P-201ENST00000391303 CYSLTR1Q9Y271 337 aa4.37□□□□□ -1.71
RNU1-56P-201ENST00000391303 IGLV4-3A0A075B6K6 122 aa4.36□□□□□ -1.71
RNU1-56P-201ENST00000391303 TRBV30A0A0K0K1B3 111 aa4.36□□□□□ -1.71
RNU1-56P-201ENST00000391303 A0A1W2PNN7 141 aa4.36□□□□□ -1.71
RNU1-56P-201ENST00000391303 KRTAP10-8P60410 259 aa4.36□□□□□ -1.71
RNU1-56P-201ENST00000391303 RNASE13Q5GAN3 156 aaKnown RBP4.36□□□□□ -1.71
RNU1-56P-201ENST00000391303 TEX43Q6ZNM6 134 aa4.36□□□□□ -1.71
RNU1-56P-201ENST00000391303 Q8N8P6 123 aa4.36□□□□□ -1.71
RNU1-56P-201ENST00000391303 NXT2Q9NPJ8 142 aaKnown RBP4.36□□□□□ -1.71
RNU1-56P-201ENST00000391303 TRAV9-1A0A075B6T8 112 aa4.35□□□□□ -1.71
RNU1-56P-201ENST00000391303 MT-ND6P03923 174 aa4.35□□□□□ -1.71
RNU1-56P-201ENST00000391303 RPL18AQ02543 176 aaKnown RBP4.35□□□□□ -1.71
RNU1-56P-201ENST00000391303 KIAA0087Q14695 138 aa4.35□□□□□ -1.71
RNU1-56P-201ENST00000391303 LINC00242Q5T6M2 205 aa4.35□□□□□ -1.71
RNU1-56P-201ENST00000391303 FAM19A3Q7Z5A8 133 aa4.35□□□□□ -1.71
RNU1-56P-201ENST00000391303 PACRGQ96M98 296 aaPredicted RBP4.35□□□□□ -1.71
RNU1-56P-201ENST00000391303 VCX2Q9H322 139 aa4.35□□□□□ -1.71
RNU1-56P-201ENST00000391303 NDUFC2-KCTD14E9PQ53 114 aa4.34□□□□□ -1.71
RNU1-56P-201ENST00000391303 UBE2D1P51668 147 aa4.34□□□□□ -1.71
RNU1-56P-201ENST00000391303 CLLU1Q5K131 121 aa4.34□□□□□ -1.71
RNU1-56P-201ENST00000391303 UQCC3Q6UW78 93 aa4.34□□□□□ -1.71
RNU1-56P-201ENST00000391303 C2orf66Q6UXQ4 117 aa4.34□□□□□ -1.71
RNU1-56P-201ENST00000391303 DIRC1Q969H9 104 aa4.34□□□□□ -1.71
RNU1-56P-201ENST00000391303 AMELXQ99217 191 aa4.34□□□□□ -1.71
RNU1-56P-201ENST00000391303 OPRPNQ99935 248 aaPredicted RBP4.34□□□□□ -1.71
RNU1-56P-201ENST00000391303 CTDSP1Q9GZU7 261 aa4.34□□□□□ -1.71
RNU1-56P-201ENST00000391303 PSORS1C2Q9UIG4 136 aa4.34□□□□□ -1.71
RNU1-56P-201ENST00000391303 LRP1Q07954 4544 aaKnown RBP4.34□□□□□ -1.71
RNU1-56P-201ENST00000391303 HMCN2Q8NDA2 5059 aa4.34□□□□□ -1.72
RNU1-56P-201ENST00000391303 IGIPA6NJ69 53 aa4.33□□□□□ -1.72
RNU1-56P-201ENST00000391303 HERVK_113P63121 156 aa4.33□□□□□ -1.72
RNU1-56P-201ENST00000391303 COX19Q49B96 90 aa4.33□□□□□ -1.72
RNU1-56P-201ENST00000391303 UNQ6190/PRO20217Q6UXQ8 127 aa4.33□□□□□ -1.72
RNU1-56P-201ENST00000391303 TIMM17AQ99595 171 aa4.33□□□□□ -1.72
RNU1-56P-201ENST00000391303 C6orf48Q9UBA6 75 aa4.33□□□□□ -1.72
RNU1-56P-201ENST00000391303 IGLV7-43P04211 117 aa4.32□□□□□ -1.72
RNU1-56P-201ENST00000391303 PRSS2P07478 247 aa4.32□□□□□ -1.72
RNU1-56P-201ENST00000391303 CXCL5P42830 114 aa4.32□□□□□ -1.72
RNU1-56P-201ENST00000391303 C1orf137Q5JT78 98 aa4.32□□□□□ -1.72
RNU1-56P-201ENST00000391303 C10orf25Q5T742 122 aa4.32□□□□□ -1.72
RNU1-56P-201ENST00000391303 Q8IZM0 81 aa4.32□□□□□ -1.72
RNU1-56P-201ENST00000391303 IGLV1-50A0A075B6I6 118 aa4.31□□□□□ -1.72
RNU1-56P-201ENST00000391303 LOC389332A0A1B0GUA5 103 aa4.31□□□□□ -1.72
RNU1-56P-201ENST00000391303 CKS1BP61024 79 aa4.31□□□□□ -1.72
RNU1-56P-201ENST00000391303 C6orf226Q5I0X4 101 aa4.31□□□□□ -1.72
RNU1-56P-201ENST00000391303 LINC00173Q6ZV60 143 aa4.31□□□□□ -1.72
RNU1-56P-201ENST00000391303 PHF5AQ7RTV0 110 aaKnown RBP4.31□□□□□ -1.72
RNU1-56P-201ENST00000391303 ERASQ7Z444 233 aa4.31□□□□□ -1.72
RNU1-56P-201ENST00000391303 TOMM6Q96B49 74 aa4.31□□□□□ -1.72
RNU1-56P-201ENST00000391303 FAT3Q8TDW7 4589 aa4.31□□□□□ -1.72
RNU1-56P-201ENST00000391303 TMEM218A2RU14 115 aa4.3□□□□□ -1.72
RNU1-56P-201ENST00000391303 LINC01546A6NGU7 62 aa4.3□□□□□ -1.72
RNU1-56P-201ENST00000391303 F8VRH5 84 aa4.3□□□□□ -1.72
RNU1-56P-201ENST00000391303 H0Y9J4 135 aa4.3□□□□□ -1.72
RNU1-56P-201ENST00000391303 M0QXV9 152 aa4.3□□□□□ -1.72
RNU1-56P-201ENST00000391303 S100PP25815 95 aa4.3□□□□□ -1.72
RNU1-56P-201ENST00000391303 GAGE2EQ4V326 116 aa4.3□□□□□ -1.72
RNU1-56P-201ENST00000391303 LBHQ53QV2 105 aaPredicted RBP4.3□□□□□ -1.72
RNU1-56P-201ENST00000391303 ALKBH7Q9BT30 221 aaPredicted RBP4.3□□□□□ -1.72
RNU1-56P-201ENST00000391303 GNB1LQ9BYB4 327 aa4.3□□□□□ -1.72
RNU1-56P-201ENST00000391303 GEMIN7Q9H840 131 aaKnown RBP4.3□□□□□ -1.72
RNU1-56P-201ENST00000391303 GAGE2DQ9UEU5 116 aa4.3□□□□□ -1.72
RNU1-56P-201ENST00000391303 TP73-AS1Q9UF72 201 aa4.3□□□□□ -1.72
RNU1-56P-201ENST00000391303 NUPR1O60356 82 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms