RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 NUDT11Q96G61 164 aa5.65□□□□□ -1.5
IFT88-203ENST00000389373 MRPL35Q9NZE8 188 aaKnown RBP5.65□□□□□ -1.5
IFT88-203ENST00000389373 C7orf77A4D0Y5 90 aa5.64□□□□□ -1.51
IFT88-203ENST00000389373 A8MWL6 223 aa5.64□□□□□ -1.51
IFT88-203ENST00000389373 CRYGAP11844 174 aa5.64□□□□□ -1.51
IFT88-203ENST00000389373 SRSF3P84103 164 aaKnown RBP5.64□□□□□ -1.51
IFT88-203ENST00000389373 CT83Q5H943 113 aa5.64□□□□□ -1.51
IFT88-203ENST00000389373 FAM231DQ6ZW35 169 aa5.64□□□□□ -1.51
IFT88-203ENST00000389373 KRTAP7-1Q8IUC3 87 aa5.64□□□□□ -1.51
IFT88-203ENST00000389373 OCC1Q8TAD7 63 aa5.64□□□□□ -1.51
IFT88-203ENST00000389373 BORCS7Q96B45 105 aa5.64□□□□□ -1.51
IFT88-203ENST00000389373 ST20Q9HBF5 79 aa5.64□□□□□ -1.51
IFT88-203ENST00000389373 K7EN84 100 aa5.63□□□□□ -1.51
IFT88-203ENST00000389373 GATCO43716 136 aaKnown RBP5.63□□□□□ -1.51
IFT88-203ENST00000389373 SRP19P09132 144 aaKnown RBP5.63□□□□□ -1.51
IFT88-203ENST00000389373 TPRXLQ17RH7 258 aa5.63□□□□□ -1.51
IFT88-203ENST00000389373 LINC00173Q6ZV60 143 aa5.63□□□□□ -1.51
IFT88-203ENST00000389373 LINC01551Q86U37 167 aa5.63□□□□□ -1.51
IFT88-203ENST00000389373 OR10D4PQ8NGN7 298 aa5.63□□□□□ -1.51
IFT88-203ENST00000389373 RNASE7Q9H1E1 156 aaKnown RBP5.63□□□□□ -1.51
IFT88-203ENST00000389373 ANAPC11Q9NYG5 84 aa5.63□□□□□ -1.51
IFT88-203ENST00000389373 C6orf48Q9UBA6 75 aa5.63□□□□□ -1.51
IFT88-203ENST00000389373 TLX1NBP0CAT3 122 aa5.62□□□□□ -1.51
IFT88-203ENST00000389373 FCER1GP30273 86 aa5.62□□□□□ -1.51
IFT88-203ENST00000389373 TMEM241Q24JQ0 296 aa5.62□□□□□ -1.51
IFT88-203ENST00000389373 CTDSP1Q9GZU7 261 aa5.62□□□□□ -1.51
IFT88-203ENST00000389373 TRBV6-5A0A0K0K1A5 114 aa5.61□□□□□ -1.51
IFT88-203ENST00000389373 F8WDY8 70 aa5.61□□□□□ -1.51
IFT88-203ENST00000389373 Q6ZUT4 128 aa5.61□□□□□ -1.51
IFT88-203ENST00000389373 OSTCQ9NRP0 149 aa5.61□□□□□ -1.51
IFT88-203ENST00000389373 NAT8Q9UHE5 227 aa5.61□□□□□ -1.51
IFT88-203ENST00000389373 SMAGPQ0VAQ4 97 aa5.6□□□□□ -1.51
IFT88-203ENST00000389373 ADIRFQ15847 76 aa5.6□□□□□ -1.51
IFT88-203ENST00000389373 UBE2D4Q9Y2X8 147 aa5.6□□□□□ -1.51
IFT88-203ENST00000389373 HIGD1CA8MV81 97 aa5.59□□□□□ -1.51
IFT88-203ENST00000389373 NUPR1O60356 82 aa5.59□□□□□ -1.51
IFT88-203ENST00000389373 POLR2KP53803 58 aaKnown RBP5.59□□□□□ -1.51
IFT88-203ENST00000389373 CLLU1Q5K131 121 aa5.59□□□□□ -1.51
IFT88-203ENST00000389373 C9orf129Q5T035 196 aaKnown RBP5.59□□□□□ -1.51
IFT88-203ENST00000389373 LINC00304Q8N9R0 145 aa5.59□□□□□ -1.51
IFT88-203ENST00000389373 PPDPFQ9H3Y8 114 aa5.59□□□□□ -1.51
IFT88-203ENST00000389373 A0A1B0GUT8 65 aa5.58□□□□□ -1.52
IFT88-203ENST00000389373 RPL28P46779 137 aaKnown RBP5.58□□□□□ -1.52
IFT88-203ENST00000389373 RPL23P62829 140 aaKnown RBP5.58□□□□□ -1.52
IFT88-203ENST00000389373 KRTAP13-2Q52LG2 175 aa5.58□□□□□ -1.52
IFT88-203ENST00000389373 C22orf24Q9Y442 160 aa5.58□□□□□ -1.52
IFT88-203ENST00000389373 CSDC2Q9Y534 153 aaKnown RBP5.58□□□□□ -1.52
IFT88-203ENST00000389373 TRBV27A0A0K0K1C4 114 aa5.57□□□□□ -1.52
IFT88-203ENST00000389373 C9JQL5 133 aa5.57□□□□□ -1.52
IFT88-203ENST00000389373 SMKR1H3BMG3 65 aa5.57□□□□□ -1.52
IFT88-203ENST00000389373 VCYO14598 125 aa5.57□□□□□ -1.52
IFT88-203ENST00000389373 PNRC1Q12796 327 aaPredicted RBP5.57□□□□□ -1.52
IFT88-203ENST00000389373 RIGQ13278 110 aa5.57□□□□□ -1.52
IFT88-203ENST00000389373 LINC00242Q5T6M2 205 aa5.57□□□□□ -1.52
IFT88-203ENST00000389373 LINC00337Q8N6G1 96 aa5.57□□□□□ -1.52
IFT88-203ENST00000389373 LINC00469Q8N7U9 141 aa5.57□□□□□ -1.52
IFT88-203ENST00000389373 PACRGQ96M98 296 aaPredicted RBP5.57□□□□□ -1.52
IFT88-203ENST00000389373 NAT8BQ9UHF3 227 aa5.57□□□□□ -1.52
IFT88-203ENST00000389373 FSIP2Q5CZC0 6907 aa5.56□□□□□ -1.52
IFT88-203ENST00000389373 A0A1B0GW15 77 aa5.56□□□□□ -1.52
IFT88-203ENST00000389373 NDUFC2-KCTD14E9PQ53 114 aa5.56□□□□□ -1.52
IFT88-203ENST00000389373 PPP1R2P9O14990 202 aa5.56□□□□□ -1.52
IFT88-203ENST00000389373 S100A8P05109 93 aa5.56□□□□□ -1.52
IFT88-203ENST00000389373 LBHQ53QV2 105 aaPredicted RBP5.56□□□□□ -1.52
IFT88-203ENST00000389373 UQCC3Q6UW78 93 aa5.56□□□□□ -1.52
IFT88-203ENST00000389373 C2orf82Q6UX34 121 aa5.56□□□□□ -1.52
IFT88-203ENST00000389373 TMEM18Q96B42 140 aa5.56□□□□□ -1.52
IFT88-203ENST00000389373 V9GYV3 84 aa5.56□□□□□ -1.52
IFT88-203ENST00000389373 MUC17Q685J3 4493 aa5.55□□□□□ -1.52
IFT88-203ENST00000389373 IGHV3OR16-9A0A0B4J2B5 98 aa5.55□□□□□ -1.52
IFT88-203ENST00000389373 BCE1O60756 84 aa5.55□□□□□ -1.52
IFT88-203ENST00000389373 RAB4AP20338 218 aa5.55□□□□□ -1.52
IFT88-203ENST00000389373 KIR2DL4Q99706 377 aa5.55□□□□□ -1.52
IFT88-203ENST00000389373 TMEM191AQ9H0A3 160 aa5.55□□□□□ -1.52
IFT88-203ENST00000389373 IGKV2D-26A0A0A0MRZ7 120 aa5.54□□□□□ -1.52
IFT88-203ENST00000389373 TRBV30A0A0K0K1B3 111 aa5.54□□□□□ -1.52
IFT88-203ENST00000389373 SMIM27A0A1W2PRY6 76 aa5.54□□□□□ -1.52
IFT88-203ENST00000389373 PPP1R17O96001 155 aa5.54□□□□□ -1.52
IFT88-203ENST00000389373 MT-ND4LP03901 98 aa5.54□□□□□ -1.52
IFT88-203ENST00000389373 RPL39P62891 51 aaKnown RBP5.54□□□□□ -1.52
IFT88-203ENST00000389373 KIAA0087Q14695 138 aa5.54□□□□□ -1.52
IFT88-203ENST00000389373 AMN1Q8IY45 258 aa5.54□□□□□ -1.52
IFT88-203ENST00000389373 KRTAP4-1Q9BYQ7 146 aa5.54□□□□□ -1.52
IFT88-203ENST00000389373 KRTAP4-8Q9BYQ9 185 aa5.54□□□□□ -1.52
IFT88-203ENST00000389373 XAGE1AQ9HD64 81 aa5.54□□□□□ -1.52
IFT88-203ENST00000389373 TGIF2-C20orf24A0A0A6YYL0 155 aa5.53□□□□□ -1.52
IFT88-203ENST00000389373 IFITM10A6NMD0 228 aa5.53□□□□□ -1.52
IFT88-203ENST00000389373 F8W036 122 aa5.53□□□□□ -1.52
IFT88-203ENST00000389373 ANAPC16Q96DE5 110 aa5.53□□□□□ -1.52
IFT88-203ENST00000389373 TIMM21Q9BVV7 248 aa5.53□□□□□ -1.52
IFT88-203ENST00000389373 RPL37AP8A6NKH3 93 aa5.52□□□□□ -1.53
IFT88-203ENST00000389373 UBE2AP49459 152 aa5.52□□□□□ -1.53
IFT88-203ENST00000389373 SUMO2P61956 95 aaKnown RBP5.52□□□□□ -1.53
IFT88-203ENST00000389373 HBBP68871 147 aa5.52□□□□□ -1.53
IFT88-203ENST00000389373 IFITM2Q01629 132 aa5.52□□□□□ -1.53
IFT88-203ENST00000389373 ASB16-AS1Q495Z4 193 aa5.52□□□□□ -1.53
IFT88-203ENST00000389373 ATP5L2Q7Z4Y8 100 aa5.52□□□□□ -1.53
IFT88-203ENST00000389373 MRPL55Q7Z7F7 128 aaKnown RBP5.52□□□□□ -1.53
IFT88-203ENST00000389373 NRACQ8N912 160 aa5.52□□□□□ -1.53
IFT88-203ENST00000389373 COMMD7Q86VX2 200 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms