RNA–Protein interactions for RNA: ENST00000380996.9

TSSC4-203, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSSC4, Length 1,544 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-203ENST00000380996 COX6A2Q02221 97 aa13.76□□□□□ -0.21
TSSC4-203ENST00000380996 CD164L2Q6UWJ8 174 aa13.76□□□□□ -0.21
TSSC4-203ENST00000380996 TENM2Q9NT68 2774 aa13.76□□□□□ -0.21
TSSC4-203ENST00000380996 S100A12P80511 92 aa13.75□□□□□ -0.21
TSSC4-203ENST00000380996 VAMP8Q9BV40 100 aa13.74□□□□□ -0.21
TSSC4-203ENST00000380996 C1orf43Q9BWL3 253 aa13.74□□□□□ -0.21
TSSC4-203ENST00000380996 CDKN2A-AS1Q9UH64 79 aa13.74□□□□□ -0.21
TSSC4-203ENST00000380996 IGHV3OR16-9A0A0B4J2B5 98 aa13.74□□□□□ -0.21
TSSC4-203ENST00000380996 HERVK_113P61574 105 aa13.74□□□□□ -0.21
TSSC4-203ENST00000380996 RMI2Q96E14 147 aa13.74□□□□□ -0.21
TSSC4-203ENST00000380996 NBDYA0A0U1RRE5 68 aa13.73□□□□□ -0.21
TSSC4-203ENST00000380996 hDV102S1A0JD36 115 aa13.73□□□□□ -0.21
TSSC4-203ENST00000380996 LY6G6CO95867 125 aa13.73□□□□□ -0.21
TSSC4-203ENST00000380996 STPG4Q8N801 248 aa13.73□□□□□ -0.21
TSSC4-203ENST00000380996 Q9HAA7 133 aa13.73□□□□□ -0.21
TSSC4-203ENST00000380996 CDPF1Q6NVV7 123 aa13.72□□□□□ -0.21
TSSC4-203ENST00000380996 LINC00476Q8WZB0 136 aa13.72□□□□□ -0.21
TSSC4-203ENST00000380996 IGKV2D-24A0A075B6R9 120 aa13.71□□□□□ -0.21
TSSC4-203ENST00000380996 GAGE12HA6NDE8 117 aa13.71□□□□□ -0.21
TSSC4-203ENST00000380996 C12orf57Q99622 126 aa13.71□□□□□ -0.21
TSSC4-203ENST00000380996 A0A087WZ39 114 aa13.7□□□□□ -0.22
TSSC4-203ENST00000380996 TMEM223A0PJW6 202 aa13.7□□□□□ -0.22
TSSC4-203ENST00000380996 COX7A2LO14548 114 aa13.7□□□□□ -0.22
TSSC4-203ENST00000380996 MAJINQ3KP22 176 aa13.7□□□□□ -0.22
TSSC4-203ENST00000380996 FOXI1Q12951 378 aa13.69□□□□□ -0.22
TSSC4-203ENST00000380996 C5orf38Q86SI9 138 aa13.69□□□□□ -0.22
TSSC4-203ENST00000380996 LINC00518Q8N0U6 118 aa13.69□□□□□ -0.22
TSSC4-203ENST00000380996 LINC01561Q8N1V8 128 aa13.69□□□□□ -0.22
TSSC4-203ENST00000380996 KRTAP1-5Q9BYS1 174 aa13.69□□□□□ -0.22
TSSC4-203ENST00000380996 PAM16Q9Y3D7 125 aa13.69□□□□□ -0.22
TSSC4-203ENST00000380996 COX11Q9Y6N1 276 aa13.69□□□□□ -0.22
TSSC4-203ENST00000380996 SPINK8P0C7L1 97 aa13.68□□□□□ -0.22
TSSC4-203ENST00000380996 E9PLD3 99 aa13.67□□□□□ -0.22
TSSC4-203ENST00000380996 MALP21145 153 aa13.67□□□□□ -0.22
TSSC4-203ENST00000380996 SPATA45Q537H7 98 aa13.67□□□□□ -0.22
TSSC4-203ENST00000380996 TM2D2Q9BX73 214 aa13.67□□□□□ -0.22
TSSC4-203ENST00000380996 IGHV1-58A0A0C4DH39 117 aa13.66□□□□□ -0.22
TSSC4-203ENST00000380996 ANKRD39Q53RE8 183 aa13.66□□□□□ -0.22
TSSC4-203ENST00000380996 KRTAP26-1Q6PEX3 210 aa13.66□□□□□ -0.22
TSSC4-203ENST00000380996 VPS13DQ5THJ4 4388 aa13.65□□□□□ -0.22
TSSC4-203ENST00000380996 SMIM1B2RUZ4 78 aa13.65□□□□□ -0.22
TSSC4-203ENST00000380996 APOMO95445 188 aa13.64□□□□□ -0.23
TSSC4-203ENST00000380996 PLEKHB2Q96CS7 222 aa13.64□□□□□ -0.23
TSSC4-203ENST00000380996 LYSTQ99698 3801 aa13.64□□□□□ -0.23
TSSC4-203ENST00000380996 IGHV3-64A0A075B6Q5 118 aa13.64□□□□□ -0.23
TSSC4-203ENST00000380996 LEPROTO15243 131 aa13.64□□□□□ -0.23
TSSC4-203ENST00000380996 IGLV5-39A0A0G2JS06 123 aa13.63□□□□□ -0.23
TSSC4-203ENST00000380996 M0R2N4 97 aa13.63□□□□□ -0.23
TSSC4-203ENST00000380996 NMUP48645 174 aa13.63□□□□□ -0.23
TSSC4-203ENST00000380996 DNAH1Q9P2D7 4330 aa13.61□□□□□ -0.23
TSSC4-203ENST00000380996 Q6ZR54 194 aa13.61□□□□□ -0.23
TSSC4-203ENST00000380996 IGKV2D-26A0A0A0MRZ7 120 aa13.6□□□□□ -0.23
TSSC4-203ENST00000380996 J3QQQ9 107 aa13.6□□□□□ -0.23
TSSC4-203ENST00000380996 LGALS3P17931 250 aaKnown RBP13.59□□□□□ -0.23
TSSC4-203ENST00000380996 CFAP161Q6P656 301 aa13.59□□□□□ -0.23
TSSC4-203ENST00000380996 PSCAO43653 123 aa13.59□□□□□ -0.23
TSSC4-203ENST00000380996 ORAOV1Q8WV07 137 aa13.59□□□□□ -0.23
TSSC4-203ENST00000380996 PRSS2P07478 247 aa13.58□□□□□ -0.24
TSSC4-203ENST00000380996 COX7B2Q8TF08 81 aa13.58□□□□□ -0.24
TSSC4-203ENST00000380996 TOMM7Q9P0U1 55 aa13.58□□□□□ -0.24
TSSC4-203ENST00000380996 COX8AP10176 69 aa13.56□□□□□ -0.24
TSSC4-203ENST00000380996 C6orf226Q5I0X4 101 aa13.56□□□□□ -0.24
TSSC4-203ENST00000380996 Q8IZM0 81 aa13.56□□□□□ -0.24
TSSC4-203ENST00000380996 C6orf223Q8N319 242 aa13.56□□□□□ -0.24
TSSC4-203ENST00000380996 C14orf144Q96I85 54 aa13.56□□□□□ -0.24
TSSC4-203ENST00000380996 ALMS1Q8TCU4 4167 aa13.56□□□□□ -0.24
TSSC4-203ENST00000380996 TSPEAR-AS2P59090 65 aa13.55□□□□□ -0.24
TSSC4-203ENST00000380996 PCP2Q8IVA1 136 aa13.54□□□□□ -0.24
TSSC4-203ENST00000380996 MAPKAPK5-AS1Q8N8E1 139 aa13.54□□□□□ -0.24
TSSC4-203ENST00000380996 SPAG11BQ08648 103 aa13.54□□□□□ -0.24
TSSC4-203ENST00000380996 SLC25A34Q6PIV7 304 aa13.54□□□□□ -0.24
TSSC4-203ENST00000380996 NDUFA12Q9UI09 145 aa13.54□□□□□ -0.24
TSSC4-203ENST00000380996 ZNF815PA8K554 130 aa13.53□□□□□ -0.24
TSSC4-203ENST00000380996 TSTD3H0UI37 97 aa13.53□□□□□ -0.24
TSSC4-203ENST00000380996 ZNF561-AS1K7EIQ3 104 aa13.53□□□□□ -0.24
TSSC4-203ENST00000380996 C1orf134Q5TEV5 83 aa13.53□□□□□ -0.24
TSSC4-203ENST00000380996 SFTA2Q6UW10 78 aa13.53□□□□□ -0.24
TSSC4-203ENST00000380996 TTTY13Q9BZ97 58 aa13.53□□□□□ -0.24
TSSC4-203ENST00000380996 LCE6AA0A183 80 aa13.52□□□□□ -0.25
TSSC4-203ENST00000380996 MYMXA0A1B0GTQ4 84 aa13.52□□□□□ -0.25
TSSC4-203ENST00000380996 DLEU1O43261 78 aa13.52□□□□□ -0.25
TSSC4-203ENST00000380996 BOD1L2Q8IYS8 172 aa13.52□□□□□ -0.25
TSSC4-203ENST00000380996 C15orf56Q8N910 161 aa13.52□□□□□ -0.25
TSSC4-203ENST00000380996 PRO1933Q9H354 126 aa13.52□□□□□ -0.25
TSSC4-203ENST00000380996 USP17L23D6RBM5 183 aa13.51□□□□□ -0.25
TSSC4-203ENST00000380996 CXCL5P42830 114 aa13.51□□□□□ -0.25
TSSC4-203ENST00000380996 CKS1BP61024 79 aa13.51□□□□□ -0.25
TSSC4-203ENST00000380996 KIAA0087Q14695 138 aa13.51□□□□□ -0.25
TSSC4-203ENST00000380996 Q6ZRN7 208 aaPredicted RBP13.51□□□□□ -0.25
TSSC4-203ENST00000380996 UQCR10Q9UDW1 63 aa13.51□□□□□ -0.25
TSSC4-203ENST00000380996 GVQW2A0A096LPI5 108 aaPredicted RBP13.5□□□□□ -0.25
TSSC4-203ENST00000380996 NDUFA1O15239 70 aa13.5□□□□□ -0.25
TSSC4-203ENST00000380996 HIGD2BQ4VC39 106 aa13.49□□□□□ -0.25
TSSC4-203ENST00000380996 HERV-K104P63124 156 aa13.49□□□□□ -0.25
TSSC4-203ENST00000380996 F8WDY8 70 aa13.48□□□□□ -0.25
TSSC4-203ENST00000380996 C14orf177Q52M58 125 aa13.48□□□□□ -0.25
TSSC4-203ENST00000380996 ZNF625Q96I27 306 aaPredicted RBP13.48□□□□□ -0.25
TSSC4-203ENST00000380996 SCGB1D4Q6XE38 83 aa13.47□□□□□ -0.25
TSSC4-203ENST00000380996 NTN5Q8WTR8 489 aaPredicted RBP13.47□□□□□ -0.25
TSSC4-203ENST00000380996 C2orf48Q96LS8 159 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms