RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 DHRS4-AS1Q9P1J3 65 aa11.72□□□□□ -0.53
COL2A1-202ENST00000380518 SMIM11BQ8TCY0 68 aa11.72□□□□□ -0.53
COL2A1-202ENST00000380518 CDC42SE2Q9NRR3 84 aa11.71□□□□□ -0.53
COL2A1-202ENST00000380518 MUC7Q8TAX7 377 aa11.71□□□□□ -0.53
COL2A1-202ENST00000380518 LINC00310P59036 64 aa11.71□□□□□ -0.53
COL2A1-202ENST00000380518 PRRC2AP48634 2157 aaKnown RBP11.71□□□□□ -0.54
COL2A1-202ENST00000380518 COX17Q14061 63 aa11.71□□□□□ -0.54
COL2A1-202ENST00000380518 POM121L12Q8N7R1 296 aa11.71□□□□□ -0.54
COL2A1-202ENST00000380518 CASC2Q6XLA1 102 aa11.7□□□□□ -0.54
COL2A1-202ENST00000380518 C3orf84H3BNL1 204 aa11.7□□□□□ -0.54
COL2A1-202ENST00000380518 CDSNQ15517 529 aa11.7□□□□□ -0.54
COL2A1-202ENST00000380518 Q8IZM0 81 aa11.7□□□□□ -0.54
COL2A1-202ENST00000380518 ARHGAP32A7KAX9 2087 aa11.7□□□□□ -0.54
COL2A1-202ENST00000380518 LRCOL1A6NCL2 159 aa11.69□□□□□ -0.54
COL2A1-202ENST00000380518 MUC22E2RYF6 1773 aaPredicted RBP11.69□□□□□ -0.54
COL2A1-202ENST00000380518 SERP2Q8N6R1 65 aa11.69□□□□□ -0.54
COL2A1-202ENST00000380518 AVPP01185 164 aa11.69□□□□□ -0.54
COL2A1-202ENST00000380518 WFDC10BQ8IUB3 73 aa11.68□□□□□ -0.54
COL2A1-202ENST00000380518 CLUHP3Q96NS8 147 aa11.68□□□□□ -0.54
COL2A1-202ENST00000380518 URB1-AS1Q96HZ7 61 aa11.68□□□□□ -0.54
COL2A1-202ENST00000380518 USP9XQ93008 2570 aaPredicted RBP11.68□□□□□ -0.54
COL2A1-202ENST00000380518 TLN2Q9Y4G6 2542 aa11.67□□□□□ -0.54
COL2A1-202ENST00000380518 ODF3L2Q3SX64 289 aa11.67□□□□□ -0.54
COL2A1-202ENST00000380518 LINC00242Q5T6M2 205 aa11.67□□□□□ -0.54
COL2A1-202ENST00000380518 ABCA12Q86UK0 2595 aa11.67□□□□□ -0.54
COL2A1-202ENST00000380518 ZNF73O43830 326 aaPredicted RBP11.66□□□□□ -0.54
COL2A1-202ENST00000380518 FAM19A3Q7Z5A8 133 aa11.66□□□□□ -0.54
COL2A1-202ENST00000380518 MPLKIPQ8TAP9 179 aa11.66□□□□□ -0.54
COL2A1-202ENST00000380518 NDUFC1O43677 76 aa11.66□□□□□ -0.54
COL2A1-202ENST00000380518 CRIP2P52943 208 aaPredicted RBP11.66□□□□□ -0.54
COL2A1-202ENST00000380518 C7orf33Q8WU49 177 aa11.65□□□□□ -0.54
COL2A1-202ENST00000380518 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.65□□□□□ -0.54
COL2A1-202ENST00000380518 SVIPQ8NHG7 77 aa11.65□□□□□ -0.54
COL2A1-202ENST00000380518 ZFYVE26Q68DK2 2539 aa11.65□□□□□ -0.55
COL2A1-202ENST00000380518 LOC107984640A0A0U1RRK4 108 aa11.64□□□□□ -0.55
COL2A1-202ENST00000380518 NDUFC2-KCTD14E9PQ53 114 aa11.64□□□□□ -0.55
COL2A1-202ENST00000380518 SPTSSBQ8NFR3 76 aa11.64□□□□□ -0.55
COL2A1-202ENST00000380518 CYSRT1A8MQ03 144 aa11.63□□□□□ -0.55
COL2A1-202ENST00000380518 PPDPFQ9H3Y8 114 aa11.63□□□□□ -0.55
COL2A1-202ENST00000380518 XGP55808 180 aa11.63□□□□□ -0.55
COL2A1-202ENST00000380518 ZNF706Q9Y5V0 76 aaPredicted RBP11.63□□□□□ -0.55
COL2A1-202ENST00000380518 NDUFA7O95182 113 aa11.62□□□□□ -0.55
COL2A1-202ENST00000380518 ATP5EP56381 51 aaPredicted RBP11.62□□□□□ -0.55
COL2A1-202ENST00000380518 IGLV2-18A0A075B6J9 118 aa11.62□□□□□ -0.55
COL2A1-202ENST00000380518 COX8CQ7Z4L0 72 aa11.62□□□□□ -0.55
COL2A1-202ENST00000380518 FAM240AA0A1B0GVK7 77 aa11.61□□□□□ -0.55
COL2A1-202ENST00000380518 SMIM1B2RUZ4 78 aa11.61□□□□□ -0.55
COL2A1-202ENST00000380518 EDN2P20800 178 aa11.61□□□□□ -0.55
COL2A1-202ENST00000380518 CEP192Q8TEP8 1941 aa11.61□□□□□ -0.55
COL2A1-202ENST00000380518 WFDC13Q8IUB5 93 aa11.6□□□□□ -0.55
COL2A1-202ENST00000380518 IGHV4-30-4P0DP06 118 aa11.6□□□□□ -0.55
COL2A1-202ENST00000380518 WDR87Q6ZQQ6 2873 aa11.6□□□□□ -0.55
COL2A1-202ENST00000380518 BRI3O95415 125 aa11.6□□□□□ -0.55
COL2A1-202ENST00000380518 COX7CP15954 63 aa11.6□□□□□ -0.55
COL2A1-202ENST00000380518 CHCHD7Q9BUK0 85 aa11.6□□□□□ -0.55
COL2A1-202ENST00000380518 SETD2Q9BYW2 2564 aaPredicted RBP11.6□□□□□ -0.55
COL2A1-202ENST00000380518 RPL37AP8A6NKH3 93 aa11.59□□□□□ -0.55
COL2A1-202ENST00000380518 ATG2AQ2TAZ0 1938 aa11.59□□□□□ -0.55
COL2A1-202ENST00000380518 Q6JHZ5 121 aa11.59□□□□□ -0.55
COL2A1-202ENST00000380518 NTM-AS1Q6ZSK4 140 aa11.59□□□□□ -0.55
COL2A1-202ENST00000380518 IGLV1-51P01701 117 aa11.58□□□□□ -0.56
COL2A1-202ENST00000380518 UNQ6190/PRO20217Q6UXQ8 127 aa11.58□□□□□ -0.56
COL2A1-202ENST00000380518 EGFEM1PQ0D2K5 195 aa11.58□□□□□ -0.56
COL2A1-202ENST00000380518 SPINK6Q6UWN8 80 aa11.58□□□□□ -0.56
COL2A1-202ENST00000380518 V9GYY9 64 aa11.58□□□□□ -0.56
COL2A1-202ENST00000380518 SNURFQ9Y675 71 aa11.58□□□□□ -0.56
COL2A1-202ENST00000380518 ZNF580Q9UK33 172 aa11.57□□□□□ -0.56
COL2A1-202ENST00000380518 NANOS2P60321 138 aaKnown RBP11.57□□□□□ -0.56
COL2A1-202ENST00000380518 OXLD1Q5BKU9 147 aa11.57□□□□□ -0.56
COL2A1-202ENST00000380518 FN1P02751 2386 aaKnown RBP11.57□□□□□ -0.56
COL2A1-202ENST00000380518 USP9YO00507 2555 aaPredicted RBP11.57□□□□□ -0.56
COL2A1-202ENST00000380518 RPL28P46779 137 aaKnown RBP11.56□□□□□ -0.56
COL2A1-202ENST00000380518 CEP295Q9C0D2 2601 aa11.55□□□□□ -0.56
COL2A1-202ENST00000380518 A0A0J9YWU9 116 aa11.55□□□□□ -0.56
COL2A1-202ENST00000380518 CSDC2Q9Y534 153 aaKnown RBP11.55□□□□□ -0.56
COL2A1-202ENST00000380518 LINC00474Q9P2X8 69 aa11.55□□□□□ -0.56
COL2A1-202ENST00000380518 LRP4O75096 1905 aa11.54□□□□□ -0.56
COL2A1-202ENST00000380518 M0R2N4 97 aa11.54□□□□□ -0.56
COL2A1-202ENST00000380518 TSPEAR-AS2P59090 65 aa11.54□□□□□ -0.56
COL2A1-202ENST00000380518 Q6Q795 121 aa11.54□□□□□ -0.56
COL2A1-202ENST00000380518 AMELXQ99217 191 aa11.54□□□□□ -0.56
COL2A1-202ENST00000380518 A0A1W2PPR1 153 aa11.53□□□□□ -0.56
COL2A1-202ENST00000380518 PLAC8L1A1L4L8 177 aa11.53□□□□□ -0.56
COL2A1-202ENST00000380518 CCDC179H3BU77 68 aa11.53□□□□□ -0.56
COL2A1-202ENST00000380518 IGLV4-60A0A075B6I1 120 aa11.53□□□□□ -0.56
COL2A1-202ENST00000380518 A0A096LNJ9 63 aa11.53□□□□□ -0.56
COL2A1-202ENST00000380518 LINC00694P0DN24 101 aa11.53□□□□□ -0.56
COL2A1-202ENST00000380518 KRTAP10-9P60411 292 aa11.53□□□□□ -0.56
COL2A1-202ENST00000380518 MRPL55Q7Z7F7 128 aaKnown RBP11.53□□□□□ -0.56
COL2A1-202ENST00000380518 Q8N9L7 120 aa11.53□□□□□ -0.56
COL2A1-202ENST00000380518 K7ERS5 55 aa11.52□□□□□ -0.56
COL2A1-202ENST00000380518 COX6A2Q02221 97 aa11.52□□□□□ -0.57
COL2A1-202ENST00000380518 Q8N814 137 aa11.52□□□□□ -0.57
COL2A1-202ENST00000380518 TRBV10-3A0A0K0K1G6 114 aa11.51□□□□□ -0.57
COL2A1-202ENST00000380518 PRR15LQ9BU68 103 aa11.51□□□□□ -0.57
COL2A1-202ENST00000380518 FHL2Q14192 279 aa11.51□□□□□ -0.57
COL2A1-202ENST00000380518 BEAN1Q3B7T3 259 aa11.51□□□□□ -0.57
COL2A1-202ENST00000380518 C9orf116Q5BN46 136 aaPredicted RBP11.5□□□□□ -0.57
COL2A1-202ENST00000380518 HRCT1Q6UXD1 115 aa11.5□□□□□ -0.57
COL2A1-202ENST00000380518 SRCAPQ6ZRS2 3230 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 149.1 ms