RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 LAMTOR3Q9UHA4 124 aa4.79□□□□□ -1.64
NEDD9-202ENST00000379446 TCL1BO95988 128 aa4.79□□□□□ -1.64
NEDD9-202ENST00000379446 REG3AQ06141 175 aa4.79□□□□□ -1.64
NEDD9-202ENST00000379446 A0A096LNJ9 63 aa4.79□□□□□ -1.64
NEDD9-202ENST00000379446 NDUFV3P56181 108 aaKnown RBP4.79□□□□□ -1.64
NEDD9-202ENST00000379446 FAM19A5Q7Z5A7 132 aaPredicted RBP4.79□□□□□ -1.64
NEDD9-202ENST00000379446 PRM2P04554 102 aa4.78□□□□□ -1.64
NEDD9-202ENST00000379446 PLNP26678 52 aa4.78□□□□□ -1.64
NEDD9-202ENST00000379446 PLEKHB2Q96CS7 222 aa4.78□□□□□ -1.64
NEDD9-202ENST00000379446 TP53TG1Q9Y2A0 90 aa4.78□□□□□ -1.64
NEDD9-202ENST00000379446 LENEPQ9Y5L5 61 aa4.78□□□□□ -1.64
NEDD9-202ENST00000379446 PLA2G1BP04054 148 aaKnown RBP4.78□□□□□ -1.64
NEDD9-202ENST00000379446 TEX49A0A1B0GTD5 131 aa4.78□□□□□ -1.64
NEDD9-202ENST00000379446 COL27A1Q8IZC6 1860 aaPredicted RBP4.77□□□□□ -1.65
NEDD9-202ENST00000379446 F8VRH5 84 aa4.77□□□□□ -1.65
NEDD9-202ENST00000379446 M0QXV9 152 aa4.77□□□□□ -1.65
NEDD9-202ENST00000379446 C2orf66Q6UXQ4 117 aa4.77□□□□□ -1.65
NEDD9-202ENST00000379446 CARD19Q96LW7 228 aa4.77□□□□□ -1.65
NEDD9-202ENST00000379446 OVOL2Q9BRP0 275 aa4.77□□□□□ -1.65
NEDD9-202ENST00000379446 CDIP1Q9H305 208 aa4.77□□□□□ -1.65
NEDD9-202ENST00000379446 SMR3BP02814 79 aaPredicted RBP4.77□□□□□ -1.65
NEDD9-202ENST00000379446 EDN2P20800 178 aa4.77□□□□□ -1.65
NEDD9-202ENST00000379446 TIMM21Q9BVV7 248 aa4.77□□□□□ -1.65
NEDD9-202ENST00000379446 PRO1854Q9UHT4 67 aa4.77□□□□□ -1.65
NEDD9-202ENST00000379446 CFAP47Q6ZTR5 3102 aa4.77□□□□□ -1.65
NEDD9-202ENST00000379446 TRBV6-1A0A0K0K1D8 114 aa4.76□□□□□ -1.65
NEDD9-202ENST00000379446 LINC00337Q8N6G1 96 aa4.76□□□□□ -1.65
NEDD9-202ENST00000379446 Q8N8P6 123 aa4.76□□□□□ -1.65
NEDD9-202ENST00000379446 WFDC9Q8NEX5 89 aa4.76□□□□□ -1.65
NEDD9-202ENST00000379446 DCHS1Q96JQ0 3298 aa4.76□□□□□ -1.65
NEDD9-202ENST00000379446 MRPS12O15235 138 aaKnown RBP4.76□□□□□ -1.65
NEDD9-202ENST00000379446 C9orf47Q6ZRZ4 202 aa4.76□□□□□ -1.65
NEDD9-202ENST00000379446 RPL39LQ96EH5 51 aaKnown RBP4.76□□□□□ -1.65
NEDD9-202ENST00000379446 HIGD1BQ9P298 99 aa4.76□□□□□ -1.65
NEDD9-202ENST00000379446 TACC2O95359 2948 aa4.76□□□□□ -1.65
NEDD9-202ENST00000379446 DMXL1Q9Y485 3027 aa4.76□□□□□ -1.65
NEDD9-202ENST00000379446 FAM236AA0A1B0GUQ0 79 aa4.76□□□□□ -1.65
NEDD9-202ENST00000379446 FAM236BA0A1B0GV22 79 aa4.76□□□□□ -1.65
NEDD9-202ENST00000379446 Q8N6K4 173 aa4.76□□□□□ -1.65
NEDD9-202ENST00000379446 KALRNO60229 2985 aa4.76□□□□□ -1.65
NEDD9-202ENST00000379446 A4D1N5 150 aa4.76□□□□□ -1.65
NEDD9-202ENST00000379446 SYCNQ0VAF6 134 aa4.76□□□□□ -1.65
NEDD9-202ENST00000379446 PPDPFQ9H3Y8 114 aa4.76□□□□□ -1.65
NEDD9-202ENST00000379446 IGLC6P0CF74 106 aa4.75□□□□□ -1.65
NEDD9-202ENST00000379446 CFAP126Q5VTH2 177 aa4.75□□□□□ -1.65
NEDD9-202ENST00000379446 FAM19A1Q7Z5A9 133 aa4.75□□□□□ -1.65
NEDD9-202ENST00000379446 ITPR2Q14571 2701 aa4.75□□□□□ -1.65
NEDD9-202ENST00000379446 WIPF1O43516 503 aa4.75□□□□□ -1.65
NEDD9-202ENST00000379446 CRIP2P52943 208 aaPredicted RBP4.75□□□□□ -1.65
NEDD9-202ENST00000379446 C11orf21Q9P2W6 132 aa4.75□□□□□ -1.65
NEDD9-202ENST00000379446 RNF185Q96GF1 192 aa4.75□□□□□ -1.65
NEDD9-202ENST00000379446 MIAQ16674 131 aa4.74□□□□□ -1.65
NEDD9-202ENST00000379446 ATXN8Q156A1 80 aa4.74□□□□□ -1.65
NEDD9-202ENST00000379446 ATMQ13315 3056 aa4.74□□□□□ -1.65
NEDD9-202ENST00000379446 LAMA5O15230 3695 aa4.74□□□□□ -1.65
NEDD9-202ENST00000379446 LOC107984640A0A0U1RRK4 108 aa4.74□□□□□ -1.65
NEDD9-202ENST00000379446 BEAN1Q3B7T3 259 aa4.74□□□□□ -1.65
NEDD9-202ENST00000379446 LELP1Q5T871 98 aa4.74□□□□□ -1.65
NEDD9-202ENST00000379446 DNAJC30Q96LL9 226 aa4.74□□□□□ -1.65
NEDD9-202ENST00000379446 NDUFS5O43920 106 aa4.74□□□□□ -1.65
NEDD9-202ENST00000379446 SMCPP49901 116 aaPredicted RBP4.74□□□□□ -1.65
NEDD9-202ENST00000379446 PRR4Q16378 134 aa4.74□□□□□ -1.65
NEDD9-202ENST00000379446 SLC25A29Q8N8R3 303 aa4.74□□□□□ -1.65
NEDD9-202ENST00000379446 LINC00526Q96FQ7 95 aa4.74□□□□□ -1.65
NEDD9-202ENST00000379446 RBAKDNA6NC62 111 aa4.73□□□□□ -1.65
NEDD9-202ENST00000379446 EPM2AB3EWF7 344 aa4.73□□□□□ -1.65
NEDD9-202ENST00000379446 LEPROTO15243 131 aa4.73□□□□□ -1.65
NEDD9-202ENST00000379446 RPL39P62891 51 aaKnown RBP4.73□□□□□ -1.65
NEDD9-202ENST00000379446 CLEC2BQ92478 149 aa4.73□□□□□ -1.65
NEDD9-202ENST00000379446 TRBV10-1A0A0K0K1A3 114 aa4.73□□□□□ -1.65
NEDD9-202ENST00000379446 CFC1BP0CG36 223 aa4.73□□□□□ -1.65
NEDD9-202ENST00000379446 CFC1P0CG37 223 aa4.73□□□□□ -1.65
NEDD9-202ENST00000379446 CHCHD10Q8WYQ3 142 aaPredicted RBP4.73□□□□□ -1.65
NEDD9-202ENST00000379446 OPRPNQ99935 248 aaPredicted RBP4.73□□□□□ -1.65
NEDD9-202ENST00000379446 HERVK_113P63121 156 aa4.73□□□□□ -1.65
NEDD9-202ENST00000379446 C1orf158Q8N1D5 194 aa4.73□□□□□ -1.65
NEDD9-202ENST00000379446 DAND5Q8N907 189 aa4.73□□□□□ -1.65
NEDD9-202ENST00000379446 ZFAND3Q9H8U3 227 aa4.73□□□□□ -1.65
NEDD9-202ENST00000379446 LOC100131303A0A0U1RQF7 123 aa4.73□□□□□ -1.65
NEDD9-202ENST00000379446 KRTAP10-11P60412 298 aa4.73□□□□□ -1.65
NEDD9-202ENST00000379446 GAGE2AQ6NT46 116 aa4.73□□□□□ -1.65
NEDD9-202ENST00000379446 LINC00474Q9P2X8 69 aa4.73□□□□□ -1.65
NEDD9-202ENST00000379446 C11orf86A6NJI1 115 aa4.72□□□□□ -1.65
NEDD9-202ENST00000379446 LINC01620Q4KN68 170 aa4.72□□□□□ -1.65
NEDD9-202ENST00000379446 PRR9Q5T870 116 aa4.72□□□□□ -1.65
NEDD9-202ENST00000379446 LINC00336Q6ZUF6 198 aa4.72□□□□□ -1.65
NEDD9-202ENST00000379446 MUSTN1Q8IVN3 82 aa4.72□□□□□ -1.65
NEDD9-202ENST00000379446 NBDYA0A0U1RRE5 68 aa4.72□□□□□ -1.65
NEDD9-202ENST00000379446 J3QQQ9 107 aa4.72□□□□□ -1.65
NEDD9-202ENST00000379446 KRTAP1-3Q8IUG1 177 aa4.72□□□□□ -1.65
NEDD9-202ENST00000379446 C20orf173Q96LM9 149 aa4.72□□□□□ -1.65
NEDD9-202ENST00000379446 HIST1H4AP62805 103 aaKnown RBP4.72□□□□□ -1.65
NEDD9-202ENST00000379446 UBE2D2P62837 147 aa4.72□□□□□ -1.65
NEDD9-202ENST00000379446 SUMO4Q6EEV6 95 aa4.72□□□□□ -1.65
NEDD9-202ENST00000379446 CRYBG3Q68DQ2 2970 aa4.72□□□□□ -1.65
NEDD9-202ENST00000379446 KMT2BQ9UMN6 2715 aaPredicted RBP4.71□□□□□ -1.65
NEDD9-202ENST00000379446 IGHV1-58A0A0C4DH39 117 aa4.71□□□□□ -1.65
NEDD9-202ENST00000379446 LINC00694P0DN24 101 aa4.71□□□□□ -1.65
NEDD9-202ENST00000379446 HIVEP1P15822 2718 aa4.71□□□□□ -1.65
NEDD9-202ENST00000379446 C1orf137Q5JT78 98 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms