RNA–Protein interactions for RNA: ENST00000379053.4

LINC00654-201, long intergenic non-protein coding RNA 654, humanhuman

TSL 1 (best) BASIC

Gene LINC00654, Length 6,113 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00654-201ENST00000379053 CRIP1P50238 77 aa7.99□□□□□ -1.13
LINC00654-201ENST00000379053 KLLNB2CW77 178 aa7.99□□□□□ -1.13
LINC00654-201ENST00000379053 RNASE3P12724 160 aaKnown RBP7.99□□□□□ -1.13
LINC00654-201ENST00000379053 LRRK2Q5S007 2527 aa7.98□□□□□ -1.13
LINC00654-201ENST00000379053 TRBV27A0A0K0K1C4 114 aa7.98□□□□□ -1.13
LINC00654-201ENST00000379053 C3orf84H3BNL1 204 aa7.98□□□□□ -1.13
LINC00654-201ENST00000379053 IGLV1-51P01701 117 aa7.98□□□□□ -1.13
LINC00654-201ENST00000379053 C16orf95Q9H693 158 aa7.98□□□□□ -1.13
LINC00654-201ENST00000379053 PRR9Q5T870 116 aa7.98□□□□□ -1.13
LINC00654-201ENST00000379053 CRIP3Q6Q6R5 217 aa7.98□□□□□ -1.13
LINC00654-201ENST00000379053 TP73-AS1Q9UF72 201 aa7.98□□□□□ -1.13
LINC00654-201ENST00000379053 PYGO1Q9Y3Y4 419 aa7.98□□□□□ -1.13
LINC00654-201ENST00000379053 Q6ZTC4 211 aa7.98□□□□□ -1.13
LINC00654-201ENST00000379053 TLN1Q9Y490 2541 aaKnown RBP7.97□□□□□ -1.13
LINC00654-201ENST00000379053 TRBV6-5A0A0K0K1A5 114 aa7.97□□□□□ -1.13
LINC00654-201ENST00000379053 FAM236DA0A1B0GTK5 79 aa7.97□□□□□ -1.13
LINC00654-201ENST00000379053 TSHBP01222 138 aa7.97□□□□□ -1.13
LINC00654-201ENST00000379053 FAM236CP0DP71 79 aa7.97□□□□□ -1.13
LINC00654-201ENST00000379053 RPL28P46779 137 aaKnown RBP7.97□□□□□ -1.13
LINC00654-201ENST00000379053 SDIM1Q6ZPB5 146 aa7.97□□□□□ -1.13
LINC00654-201ENST00000379053 A8MZ25 164 aa7.97□□□□□ -1.13
LINC00654-201ENST00000379053 K7ERS5 55 aa7.97□□□□□ -1.13
LINC00654-201ENST00000379053 PCDH15Q96QU1 1955 aa7.96□□□□□ -1.13
LINC00654-201ENST00000379053 Q6ZQY7 126 aa7.96□□□□□ -1.13
LINC00654-201ENST00000379053 ZNF295-AS1Q8N0V1 137 aa7.96□□□□□ -1.13
LINC00654-201ENST00000379053 C3orf22Q8N5N4 141 aa7.96□□□□□ -1.14
LINC00654-201ENST00000379053 FAM240AA0A1B0GVK7 77 aa7.96□□□□□ -1.14
LINC00654-201ENST00000379053 M0QXV9 152 aa7.96□□□□□ -1.14
LINC00654-201ENST00000379053 LINC00337Q8N6G1 96 aa7.96□□□□□ -1.14
LINC00654-201ENST00000379053 V9GYY9 64 aa7.96□□□□□ -1.14
LINC00654-201ENST00000379053 ABCA12Q86UK0 2595 aa7.96□□□□□ -1.14
LINC00654-201ENST00000379053 RNF185Q96GF1 192 aa7.95□□□□□ -1.14
LINC00654-201ENST00000379053 ALPK3Q96L96 1907 aa7.95□□□□□ -1.14
LINC00654-201ENST00000379053 CYSRT1A8MQ03 144 aa7.95□□□□□ -1.14
LINC00654-201ENST00000379053 MUC7Q8TAX7 377 aa7.95□□□□□ -1.14
LINC00654-201ENST00000379053 EDN2P20800 178 aa7.94□□□□□ -1.14
LINC00654-201ENST00000379053 WFDC13Q8IUB5 93 aa7.94□□□□□ -1.14
LINC00654-201ENST00000379053 ZNF106Q9H2Y7 1883 aaKnown RBP7.94□□□□□ -1.14
LINC00654-201ENST00000379053 C11orf21Q9P2W6 132 aa7.94□□□□□ -1.14
LINC00654-201ENST00000379053 A0A1W2PPR1 153 aa7.93□□□□□ -1.14
LINC00654-201ENST00000379053 ZNF73O43830 326 aaPredicted RBP7.93□□□□□ -1.14
LINC00654-201ENST00000379053 CIRBP-AS1Q8TBR5 109 aa7.93□□□□□ -1.14
LINC00654-201ENST00000379053 CHCHD7Q9BUK0 85 aa7.93□□□□□ -1.14
LINC00654-201ENST00000379053 NDUFC2-KCTD14E9PQ53 114 aa7.92□□□□□ -1.14
LINC00654-201ENST00000379053 IGLV2-11P01706 119 aa7.92□□□□□ -1.14
LINC00654-201ENST00000379053 C6orf223Q8N319 242 aa7.92□□□□□ -1.14
LINC00654-201ENST00000379053 MRPS36P82909 103 aaKnown RBP7.92□□□□□ -1.14
LINC00654-201ENST00000379053 OBSL1O75147 1896 aa7.92□□□□□ -1.14
LINC00654-201ENST00000379053 ENHOQ6UWT2 76 aa7.92□□□□□ -1.14
LINC00654-201ENST00000379053 COX17Q14061 63 aa7.91□□□□□ -1.14
LINC00654-201ENST00000379053 Q8IZM0 81 aa7.91□□□□□ -1.14
LINC00654-201ENST00000379053 PLA2G1BP04054 148 aaKnown RBP7.91□□□□□ -1.14
LINC00654-201ENST00000379053 C10orf25Q5T742 122 aa7.91□□□□□ -1.14
LINC00654-201ENST00000379053 CDC42SE2Q9NRR3 84 aa7.91□□□□□ -1.14
LINC00654-201ENST00000379053 TRIAP1O43715 76 aa7.9□□□□□ -1.14
LINC00654-201ENST00000379053 UNQ6190/PRO20217Q6UXQ8 127 aa7.9□□□□□ -1.14
LINC00654-201ENST00000379053 EGFEM1PQ0D2K5 195 aa7.9□□□□□ -1.15
LINC00654-201ENST00000379053 TLN2Q9Y4G6 2542 aa7.9□□□□□ -1.15
LINC00654-201ENST00000379053 LINC01556Q5JQF7 62 aa7.89□□□□□ -1.15
LINC00654-201ENST00000379053 C1orf137Q5JT78 98 aa7.89□□□□□ -1.15
LINC00654-201ENST00000379053 NRACQ8N912 160 aa7.89□□□□□ -1.15
LINC00654-201ENST00000379053 TIMM17BO60830 172 aa7.89□□□□□ -1.15
LINC00654-201ENST00000379053 POLR2KP53803 58 aaKnown RBP7.89□□□□□ -1.15
LINC00654-201ENST00000379053 ATP5EP2Q5VTU8 51 aa7.89□□□□□ -1.15
LINC00654-201ENST00000379053 MAPKAPK5-AS1Q8N8E1 139 aa7.89□□□□□ -1.15
LINC00654-201ENST00000379053 TRBV30A0A0K0K1B3 111 aa7.89□□□□□ -1.15
LINC00654-201ENST00000379053 REG3GQ6UW15 175 aa7.89□□□□□ -1.15
LINC00654-201ENST00000379053 CCDC179H3BU77 68 aa7.88□□□□□ -1.15
LINC00654-201ENST00000379053 MRPS12O15235 138 aaKnown RBP7.88□□□□□ -1.15
LINC00654-201ENST00000379053 C16orf90A8MZG2 172 aa7.87□□□□□ -1.15
LINC00654-201ENST00000379053 Q8N9L7 120 aa7.87□□□□□ -1.15
LINC00654-201ENST00000379053 FN1P02751 2386 aaKnown RBP7.87□□□□□ -1.15
LINC00654-201ENST00000379053 SERP2Q8N6R1 65 aa7.87□□□□□ -1.15
LINC00654-201ENST00000379053 SERP1Q9Y6X1 66 aa7.87□□□□□ -1.15
LINC00654-201ENST00000379053 ARHGAP32A7KAX9 2087 aa7.86□□□□□ -1.15
LINC00654-201ENST00000379053 SMIM11BQ8TCY0 68 aa7.86□□□□□ -1.15
LINC00654-201ENST00000379053 CRIP2P52943 208 aaPredicted RBP7.86□□□□□ -1.15
LINC00654-201ENST00000379053 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.86□□□□□ -1.15
LINC00654-201ENST00000379053 YPEL4Q96NS1 127 aa7.86□□□□□ -1.15
LINC00654-201ENST00000379053 LST1O00453 97 aa7.86□□□□□ -1.15
LINC00654-201ENST00000379053 FHL2Q14192 279 aa7.86□□□□□ -1.15
LINC00654-201ENST00000379053 USP9XQ93008 2570 aaPredicted RBP7.86□□□□□ -1.15
LINC00654-201ENST00000379053 XGP55808 180 aa7.85□□□□□ -1.15
LINC00654-201ENST00000379053 COX6A2Q02221 97 aa7.85□□□□□ -1.15
LINC00654-201ENST00000379053 KRTAP24-1Q3LI83 254 aa7.85□□□□□ -1.15
LINC00654-201ENST00000379053 PRR15LQ9BU68 103 aa7.85□□□□□ -1.15
LINC00654-201ENST00000379053 C9orf116Q5BN46 136 aaPredicted RBP7.85□□□□□ -1.15
LINC00654-201ENST00000379053 Q6ZVQ6 151 aa7.85□□□□□ -1.15
LINC00654-201ENST00000379053 IMUPQ9GZP8 106 aa7.85□□□□□ -1.15
LINC00654-201ENST00000379053 FHL3Q13643 280 aa7.84□□□□□ -1.16
LINC00654-201ENST00000379053 CEP295Q9C0D2 2601 aa7.83□□□□□ -1.16
LINC00654-201ENST00000379053 KIAA1549Q9HCM3 1950 aa7.83□□□□□ -1.16
LINC00654-201ENST00000379053 COX7CP15954 63 aa7.83□□□□□ -1.16
LINC00654-201ENST00000379053 LINC00242Q5T6M2 205 aa7.83□□□□□ -1.16
LINC00654-201ENST00000379053 C1orf195Q5TG92 126 aa7.83□□□□□ -1.16
LINC00654-201ENST00000379053 C2orf91Q6ZV80 131 aa7.83□□□□□ -1.16
LINC00654-201ENST00000379053 SNURFQ9Y675 71 aa7.83□□□□□ -1.16
LINC00654-201ENST00000379053 FASNP49327 2511 aaKnown RBP7.83□□□□□ -1.16
LINC00654-201ENST00000379053 IGLV4-60A0A075B6I1 120 aa7.83□□□□□ -1.16
LINC00654-201ENST00000379053 TANC2Q9HCD6 1990 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms