RNA–Protein interactions for RNA: ENST00000376491.7

CLCN6-204, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 927 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-204ENST00000376491 ORAOV1Q8WV07 137 aa9.08□□□□□ -0.96
CLCN6-204ENST00000376491 C20orf78Q9BR46 151 aa9.08□□□□□ -0.96
CLCN6-204ENST00000376491 SMIM27A0A1W2PRY6 76 aa9.07□□□□□ -0.96
CLCN6-204ENST00000376491 IGLV7-43P04211 117 aa9.07□□□□□ -0.96
CLCN6-204ENST00000376491 PRR26Q8N8Z3 221 aa9.07□□□□□ -0.96
CLCN6-204ENST00000376491 hCG_2014768A0A024R1R8 64 aa9.06□□□□□ -0.96
CLCN6-204ENST00000376491 C9JQL5 133 aa9.06□□□□□ -0.96
CLCN6-204ENST00000376491 TNFRSF6BO95407 300 aa9.06□□□□□ -0.96
CLCN6-204ENST00000376491 CKS2P33552 79 aa9.06□□□□□ -0.96
CLCN6-204ENST00000376491 KRTAP7-1Q8IUC3 87 aa9.06□□□□□ -0.96
CLCN6-204ENST00000376491 C6orf48Q9UBA6 75 aa9.06□□□□□ -0.96
CLCN6-204ENST00000376491 F8WDY8 70 aa9.05□□□□□ -0.96
CLCN6-204ENST00000376491 NDUFA1O15239 70 aa9.05□□□□□ -0.96
CLCN6-204ENST00000376491 TLX1NBP0CAT3 122 aa9.05□□□□□ -0.96
CLCN6-204ENST00000376491 MRPS36P82909 103 aaKnown RBP9.05□□□□□ -0.96
CLCN6-204ENST00000376491 ADIRFQ15847 76 aa9.05□□□□□ -0.96
CLCN6-204ENST00000376491 UNQ6190/PRO20217Q6UXQ8 127 aa9.05□□□□□ -0.96
CLCN6-204ENST00000376491 IMMP2LQ96T52 175 aa9.05□□□□□ -0.96
CLCN6-204ENST00000376491 SMIM2Q9BVW6 85 aa9.05□□□□□ -0.96
CLCN6-204ENST00000376491 SPANXA1Q9NS26 97 aa9.05□□□□□ -0.96
CLCN6-204ENST00000376491 A0A087WZ39 114 aa9.04□□□□□ -0.96
CLCN6-204ENST00000376491 D6R8Y8 96 aa9.04□□□□□ -0.96
CLCN6-204ENST00000376491 TCAPO15273 167 aa9.04□□□□□ -0.96
CLCN6-204ENST00000376491 NPYP01303 97 aa9.04□□□□□ -0.96
CLCN6-204ENST00000376491 DIRC1Q969H9 104 aa9.04□□□□□ -0.96
CLCN6-204ENST00000376491 KIAA0087Q14695 138 aa9.03□□□□□ -0.96
CLCN6-204ENST00000376491 NAT8Q9UHE5 227 aa9.03□□□□□ -0.96
CLCN6-204ENST00000376491 A0A1B0GW15 77 aa9.02□□□□□ -0.97
CLCN6-204ENST00000376491 IFITM10A6NMD0 228 aa9.02□□□□□ -0.97
CLCN6-204ENST00000376491 H0Y9J4 135 aa9.02□□□□□ -0.97
CLCN6-204ENST00000376491 HBBP68871 147 aa9.02□□□□□ -0.97
CLCN6-204ENST00000376491 SRSF3P84103 164 aaKnown RBP9.02□□□□□ -0.97
CLCN6-204ENST00000376491 GAGE2EQ4V326 116 aa9.02□□□□□ -0.97
CLCN6-204ENST00000376491 MRPL54Q6P161 138 aaKnown RBP9.02□□□□□ -0.97
CLCN6-204ENST00000376491 FAM19A5Q7Z5A7 132 aaPredicted RBP9.02□□□□□ -0.97
CLCN6-204ENST00000376491 SMDT1Q9H4I9 107 aa9.02□□□□□ -0.97
CLCN6-204ENST00000376491 GAGE2DQ9UEU5 116 aa9.02□□□□□ -0.97
CLCN6-204ENST00000376491 A0A1B0GXF2 115 aa9.01□□□□□ -0.97
CLCN6-204ENST00000376491 KRTAP1-4P0C5Y4 121 aa9.01□□□□□ -0.97
CLCN6-204ENST00000376491 LINC00242Q5T6M2 205 aa9□□□□□ -0.97
CLCN6-204ENST00000376491 C2orf82Q6UX34 121 aa8.99□□□□□ -0.97
CLCN6-204ENST00000376491 TGIF2-C20orf24A0A0A6YYL0 155 aa8.98□□□□□ -0.97
CLCN6-204ENST00000376491 F8W036 122 aa8.98□□□□□ -0.97
CLCN6-204ENST00000376491 M0QXV9 152 aa8.98□□□□□ -0.97
CLCN6-204ENST00000376491 IGLV1-50A0A075B6I6 118 aa8.97□□□□□ -0.97
CLCN6-204ENST00000376491 IGLV4-3A0A075B6K6 122 aa8.97□□□□□ -0.97
CLCN6-204ENST00000376491 PPBPP02775 128 aa8.97□□□□□ -0.97
CLCN6-204ENST00000376491 S100A8P05109 93 aa8.97□□□□□ -0.97
CLCN6-204ENST00000376491 IFI27P40305 119 aaPredicted RBP8.97□□□□□ -0.97
CLCN6-204ENST00000376491 C9orf129Q5T035 196 aaKnown RBP8.97□□□□□ -0.97
CLCN6-204ENST00000376491 PYGO1Q9Y3Y4 419 aa8.97□□□□□ -0.97
CLCN6-204ENST00000376491 TRBV30A0A0K0K1B3 111 aa8.96□□□□□ -0.98
CLCN6-204ENST00000376491 RAB5AP20339 215 aa8.95□□□□□ -0.98
CLCN6-204ENST00000376491 UBE2BP63146 152 aa8.95□□□□□ -0.98
CLCN6-204ENST00000376491 PEA15Q15121 130 aa8.95□□□□□ -0.98
CLCN6-204ENST00000376491 TMEM136Q6ZRR5 245 aa8.95□□□□□ -0.98
CLCN6-204ENST00000376491 ORMDL3Q8N138 153 aa8.95□□□□□ -0.98
CLCN6-204ENST00000376491 PRELID3AQ96N28 172 aa8.95□□□□□ -0.98
CLCN6-204ENST00000376491 NDUFC2-KCTD14E9PQ53 114 aa8.94□□□□□ -0.98
CLCN6-204ENST00000376491 UBE2D1P51668 147 aa8.94□□□□□ -0.98
CLCN6-204ENST00000376491 ZC2HC1BQ5TFG8 222 aa8.94□□□□□ -0.98
CLCN6-204ENST00000376491 TMEM141Q96I45 108 aa8.94□□□□□ -0.98
CLCN6-204ENST00000376491 PRSS47A8MTI9 375 aa8.93□□□□□ -0.98
CLCN6-204ENST00000376491 LINC00173Q6ZV60 143 aa8.93□□□□□ -0.98
CLCN6-204ENST00000376491 LOC389332A0A1B0GUA5 103 aa8.92□□□□□ -0.98
CLCN6-204ENST00000376491 TEX43Q6ZNM6 134 aa8.92□□□□□ -0.98
CLCN6-204ENST00000376491 ATP5L2Q7Z4Y8 100 aa8.92□□□□□ -0.98
CLCN6-204ENST00000376491 LINC01561Q8N1V8 128 aa8.92□□□□□ -0.98
CLCN6-204ENST00000376491 PACRGQ96M98 296 aaPredicted RBP8.92□□□□□ -0.98
CLCN6-204ENST00000376491 AMELXQ99217 191 aa8.91□□□□□ -0.98
CLCN6-204ENST00000376491 A0A1B0GVG6 124 aa8.9□□□□□ -0.98
CLCN6-204ENST00000376491 C2orf66Q6UXQ4 117 aa8.9□□□□□ -0.98
CLCN6-204ENST00000376491 ZNF861PO60384 105 aa8.89□□□□□ -0.99
CLCN6-204ENST00000376491 PRR4Q16378 134 aa8.89□□□□□ -0.99
CLCN6-204ENST00000376491 LINC00469Q8N7U9 141 aa8.89□□□□□ -0.99
CLCN6-204ENST00000376491 C2orf88Q9BSF0 95 aa8.89□□□□□ -0.99
CLCN6-204ENST00000376491 RPL13AP40429 203 aaKnown RBP8.88□□□□□ -0.99
CLCN6-204ENST00000376491 Q6ZN92 141 aa8.88□□□□□ -0.99
CLCN6-204ENST00000376491 Q8N8P6 123 aa8.88□□□□□ -0.99
CLCN6-204ENST00000376491 MAP1LC3AQ9H492 121 aa8.88□□□□□ -0.99
CLCN6-204ENST00000376491 TOMM7Q9P0U1 55 aa8.88□□□□□ -0.99
CLCN6-204ENST00000376491 CYSLTR1Q9Y271 337 aa8.88□□□□□ -0.99
CLCN6-204ENST00000376491 LAMTOR2Q9Y2Q5 125 aa8.88□□□□□ -0.99
CLCN6-204ENST00000376491 CARHSP1Q9Y2V2 147 aaKnown RBP8.88□□□□□ -0.99
CLCN6-204ENST00000376491 C22orf24Q9Y442 160 aa8.88□□□□□ -0.99
CLCN6-204ENST00000376491 IGIPA6NJ69 53 aa8.87□□□□□ -0.99
CLCN6-204ENST00000376491 PRSS2P07478 247 aa8.87□□□□□ -0.99
CLCN6-204ENST00000376491 FAM19A3Q7Z5A8 133 aa8.87□□□□□ -0.99
CLCN6-204ENST00000376491 VCX2Q9H322 139 aa8.87□□□□□ -0.99
CLCN6-204ENST00000376491 XAGE1AQ9HD64 81 aa8.87□□□□□ -0.99
CLCN6-204ENST00000376491 CKS1BP61024 79 aa8.86□□□□□ -0.99
CLCN6-204ENST00000376491 Q8IZM0 81 aa8.86□□□□□ -0.99
CLCN6-204ENST00000376491 NUPR1O60356 82 aa8.85□□□□□ -0.99
CLCN6-204ENST00000376491 C6orf226Q5I0X4 101 aa8.85□□□□□ -0.99
CLCN6-204ENST00000376491 ALKBH7Q9BT30 221 aaPredicted RBP8.85□□□□□ -0.99
CLCN6-204ENST00000376491 CTDSP1Q9GZU7 261 aa8.85□□□□□ -0.99
CLCN6-204ENST00000376491 NPSP0C0P6 89 aa8.84□□□□□ -0.99
CLCN6-204ENST00000376491 CDKN2A-AS1Q9UH64 79 aa8.84□□□□□ -0.99
CLCN6-204ENST00000376491 ORMDL2Q53FV1 153 aa8.83□□□□□ -1
CLCN6-204ENST00000376491 A0A087X002 238 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms