RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 MRPS36P82909 103 aaKnown RBP14.17□□□□□ -0.14
C9orf47-202ENST00000375850 ORAOV1Q8WV07 137 aa14.17□□□□□ -0.14
C9orf47-202ENST00000375850 IGHV3OR16-9A0A0B4J2B5 98 aa14.16□□□□□ -0.14
C9orf47-202ENST00000375850 CKS2P33552 79 aa14.16□□□□□ -0.14
C9orf47-202ENST00000375850 IGLV7-43P04211 117 aa14.15□□□□□ -0.14
C9orf47-202ENST00000375850 SMIM27A0A1W2PRY6 76 aa14.14□□□□□ -0.15
C9orf47-202ENST00000375850 S100A8P05109 93 aa14.14□□□□□ -0.15
C9orf47-202ENST00000375850 HBBP68871 147 aa14.14□□□□□ -0.15
C9orf47-202ENST00000375850 TNFRSF6BO95407 300 aa14.13□□□□□ -0.15
C9orf47-202ENST00000375850 RPL23P62829 140 aaKnown RBP14.13□□□□□ -0.15
C9orf47-202ENST00000375850 SMIM2Q9BVW6 85 aa14.13□□□□□ -0.15
C9orf47-202ENST00000375850 A0A087WZ39 114 aa14.12□□□□□ -0.15
C9orf47-202ENST00000375850 RPL39P62891 51 aaKnown RBP14.12□□□□□ -0.15
C9orf47-202ENST00000375850 IFITM10A6NMD0 228 aa14.11□□□□□ -0.15
C9orf47-202ENST00000375850 F8W036 122 aa14.11□□□□□ -0.15
C9orf47-202ENST00000375850 NAT8Q9UHE5 227 aa14.11□□□□□ -0.15
C9orf47-202ENST00000375850 H0Y9J4 135 aa14.1□□□□□ -0.15
C9orf47-202ENST00000375850 PPBPP02775 128 aa14.1□□□□□ -0.15
C9orf47-202ENST00000375850 ADIRFQ15847 76 aa14.1□□□□□ -0.15
C9orf47-202ENST00000375850 FAM104AQ969W3 186 aa14.1□□□□□ -0.15
C9orf47-202ENST00000375850 IGLV1-50A0A075B6I6 118 aa14.09□□□□□ -0.15
C9orf47-202ENST00000375850 TGIF2-C20orf24A0A0A6YYL0 155 aa14.09□□□□□ -0.15
C9orf47-202ENST00000375850 PRR26Q8N8Z3 221 aa14.08□□□□□ -0.16
C9orf47-202ENST00000375850 SMDT1Q9H4I9 107 aa14.08□□□□□ -0.16
C9orf47-202ENST00000375850 C6orf48Q9UBA6 75 aa14.08□□□□□ -0.16
C9orf47-202ENST00000375850 D6R8Y8 96 aa14.07□□□□□ -0.16
C9orf47-202ENST00000375850 IFI27P40305 119 aaPredicted RBP14.07□□□□□ -0.16
C9orf47-202ENST00000375850 C10orf25Q5T742 122 aa14.07□□□□□ -0.16
C9orf47-202ENST00000375850 UNQ6190/PRO20217Q6UXQ8 127 aa14.07□□□□□ -0.16
C9orf47-202ENST00000375850 TRBV30A0A0K0K1B3 111 aa14.05□□□□□ -0.16
C9orf47-202ENST00000375850 FAM168BA1KXE4 195 aa14.05□□□□□ -0.16
C9orf47-202ENST00000375850 RAB5AP20339 215 aa14.05□□□□□ -0.16
C9orf47-202ENST00000375850 FAM19A5Q7Z5A7 132 aaPredicted RBP14.05□□□□□ -0.16
C9orf47-202ENST00000375850 PYGO1Q9Y3Y4 419 aa14.05□□□□□ -0.16
C9orf47-202ENST00000375850 GAGE2EQ4V326 116 aa14.04□□□□□ -0.16
C9orf47-202ENST00000375850 GAGE2DQ9UEU5 116 aa14.04□□□□□ -0.16
C9orf47-202ENST00000375850 NPYP01303 97 aa14.03□□□□□ -0.16
C9orf47-202ENST00000375850 A0A1B0GXF2 115 aa14.02□□□□□ -0.17
C9orf47-202ENST00000375850 M0QXV9 152 aa14.02□□□□□ -0.17
C9orf47-202ENST00000375850 RPL13AP40429 203 aaKnown RBP14.02□□□□□ -0.17
C9orf47-202ENST00000375850 UBE2BP63146 152 aa14.02□□□□□ -0.17
C9orf47-202ENST00000375850 KIAA0087Q14695 138 aa14.02□□□□□ -0.17
C9orf47-202ENST00000375850 PEA15Q15121 130 aa14.02□□□□□ -0.17
C9orf47-202ENST00000375850 MRPL54Q6P161 138 aaKnown RBP14.02□□□□□ -0.17
C9orf47-202ENST00000375850 ORMDL3Q8N138 153 aa14.02□□□□□ -0.17
C9orf47-202ENST00000375850 LINC01561Q8N1V8 128 aa14.02□□□□□ -0.17
C9orf47-202ENST00000375850 NDUFC2-KCTD14E9PQ53 114 aa14.01□□□□□ -0.17
C9orf47-202ENST00000375850 PACRGQ96M98 296 aaPredicted RBP14.01□□□□□ -0.17
C9orf47-202ENST00000375850 LINC00242Q5T6M2 205 aa14□□□□□ -0.17
C9orf47-202ENST00000375850 ATP5L2Q7Z4Y8 100 aa14□□□□□ -0.17
C9orf47-202ENST00000375850 KRTAP11-1Q8IUC1 163 aa14□□□□□ -0.17
C9orf47-202ENST00000375850 UBE2D1P51668 147 aa13.99□□□□□ -0.17
C9orf47-202ENST00000375850 TMEM141Q96I45 108 aa13.99□□□□□ -0.17
C9orf47-202ENST00000375850 hCG_2014768A0A024R1R8 64 aa13.98□□□□□ -0.17
C9orf47-202ENST00000375850 KRTAP1-4P0C5Y4 121 aa13.98□□□□□ -0.17
C9orf47-202ENST00000375850 TMEM136Q6ZRR5 245 aa13.98□□□□□ -0.17
C9orf47-202ENST00000375850 IGLV4-3A0A075B6K6 122 aa13.97□□□□□ -0.17
C9orf47-202ENST00000375850 C9JQL5 133 aa13.97□□□□□ -0.17
C9orf47-202ENST00000375850 TEX43Q6ZNM6 134 aa13.97□□□□□ -0.17
C9orf47-202ENST00000375850 PRELID3AQ96N28 172 aa13.97□□□□□ -0.17
C9orf47-202ENST00000375850 C2orf88Q9BSF0 95 aa13.97□□□□□ -0.17
C9orf47-202ENST00000375850 LAMTOR2Q9Y2Q5 125 aa13.97□□□□□ -0.17
C9orf47-202ENST00000375850 KRTAP7-1Q8IUC3 87 aa13.96□□□□□ -0.17
C9orf47-202ENST00000375850 CARHSP1Q9Y2V2 147 aaKnown RBP13.96□□□□□ -0.17
C9orf47-202ENST00000375850 PRSS47A8MTI9 375 aa13.95□□□□□ -0.18
C9orf47-202ENST00000375850 Q6ZN92 141 aa13.94□□□□□ -0.18
C9orf47-202ENST00000375850 NPSP0C0P6 89 aa13.93□□□□□ -0.18
C9orf47-202ENST00000375850 C2orf82Q6UX34 121 aa13.93□□□□□ -0.18
C9orf47-202ENST00000375850 PRSS2P07478 247 aa13.92□□□□□ -0.18
C9orf47-202ENST00000375850 C9orf129Q5T035 196 aaKnown RBP13.92□□□□□ -0.18
C9orf47-202ENST00000375850 CYSLTR1Q9Y271 337 aa13.92□□□□□ -0.18
C9orf47-202ENST00000375850 LPAP08519 4548 aa13.92□□□□□ -0.18
C9orf47-202ENST00000375850 NUPR1O60356 82 aa13.91□□□□□ -0.18
C9orf47-202ENST00000375850 MAP1LC3AQ9H492 121 aa13.91□□□□□ -0.18
C9orf47-202ENST00000375850 ZNF861PO60384 105 aa13.9□□□□□ -0.18
C9orf47-202ENST00000375850 CKS1BP61024 79 aa13.9□□□□□ -0.18
C9orf47-202ENST00000375850 SRSF3P84103 164 aaKnown RBP13.9□□□□□ -0.18
C9orf47-202ENST00000375850 K7EMI3 77 aa13.89□□□□□ -0.19
C9orf47-202ENST00000375850 LBHQ53QV2 105 aaPredicted RBP13.89□□□□□ -0.19
C9orf47-202ENST00000375850 VCX2Q9H322 139 aa13.89□□□□□ -0.19
C9orf47-202ENST00000375850 Q8IZM0 81 aa13.88□□□□□ -0.19
C9orf47-202ENST00000375850 AMELXQ99217 191 aa13.88□□□□□ -0.19
C9orf47-202ENST00000375850 SEC11AP67812 179 aa13.87□□□□□ -0.19
C9orf47-202ENST00000375850 PRR4Q16378 134 aa13.87□□□□□ -0.19
C9orf47-202ENST00000375850 ORMDL2Q53FV1 153 aa13.87□□□□□ -0.19
C9orf47-202ENST00000375850 C6orf226Q5I0X4 101 aa13.87□□□□□ -0.19
C9orf47-202ENST00000375850 C2orf66Q6UXQ4 117 aa13.87□□□□□ -0.19
C9orf47-202ENST00000375850 FAM19A3Q7Z5A8 133 aa13.87□□□□□ -0.19
C9orf47-202ENST00000375850 Q8N8P6 123 aa13.87□□□□□ -0.19
C9orf47-202ENST00000375850 PAPPA-AS1Q5QFB9 102 aa13.86□□□□□ -0.19
C9orf47-202ENST00000375850 LOC389332A0A1B0GUA5 103 aa13.85□□□□□ -0.19
C9orf47-202ENST00000375850 TOMM7Q9P0U1 55 aa13.85□□□□□ -0.19
C9orf47-202ENST00000375850 G0S2P27469 103 aa13.84□□□□□ -0.19
C9orf47-202ENST00000375850 LINC00173Q6ZV60 143 aa13.84□□□□□ -0.19
C9orf47-202ENST00000375850 ALKBH7Q9BT30 221 aaPredicted RBP13.84□□□□□ -0.19
C9orf47-202ENST00000375850 TP73-AS1Q9UF72 201 aa13.84□□□□□ -0.19
C9orf47-202ENST00000375850 C22orf24Q9Y442 160 aa13.84□□□□□ -0.19
C9orf47-202ENST00000375850 HERVK_113P63121 156 aa13.83□□□□□ -0.2
C9orf47-202ENST00000375850 A0A0U1RQV1 116 aa13.81□□□□□ -0.2
C9orf47-202ENST00000375850 IGIPA6NJ69 53 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms