RNA–Protein interactions for RNA: ENST00000375640.7

C6orf48-205, Transcript of chromosome 6 open reading frame 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C6orf48, Length 1,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf48-205ENST00000375640 COMMD7Q86VX2 200 aa12.66□□□□□ -0.38
C6orf48-205ENST00000375640 HERC1Q15751 4861 aa12.66□□□□□ -0.38
C6orf48-205ENST00000375640 IGHV3OR16-9A0A0B4J2B5 98 aa12.65□□□□□ -0.38
C6orf48-205ENST00000375640 IFITM10A6NMD0 228 aa12.65□□□□□ -0.38
C6orf48-205ENST00000375640 J3QL48 77 aa12.65□□□□□ -0.38
C6orf48-205ENST00000375640 C2orf48Q96LS8 159 aa12.65□□□□□ -0.38
C6orf48-205ENST00000375640 ORMDL2Q53FV1 153 aa12.64□□□□□ -0.39
C6orf48-205ENST00000375640 NXT2Q9NPJ8 142 aaKnown RBP12.64□□□□□ -0.39
C6orf48-205ENST00000375640 DMBT1Q9UGM3 2413 aaPredicted RBP12.63□□□□□ -0.39
C6orf48-205ENST00000375640 IGLV4-3A0A075B6K6 122 aa12.63□□□□□ -0.39
C6orf48-205ENST00000375640 A0A096LNI7 61 aa12.63□□□□□ -0.39
C6orf48-205ENST00000375640 S100PP25815 95 aa12.63□□□□□ -0.39
C6orf48-205ENST00000375640 STPG4Q8N801 248 aa12.63□□□□□ -0.39
C6orf48-205ENST00000375640 TMEM141Q96I45 108 aa12.63□□□□□ -0.39
C6orf48-205ENST00000375640 CAMK2N2Q96S95 79 aa12.63□□□□□ -0.39
C6orf48-205ENST00000375640 CYSLTR1Q9Y271 337 aa12.63□□□□□ -0.39
C6orf48-205ENST00000375640 C10orf91Q5T1B1 145 aa12.62□□□□□ -0.39
C6orf48-205ENST00000375640 C2orf66Q6UXQ4 117 aa12.62□□□□□ -0.39
C6orf48-205ENST00000375640 Q6ZRU5 148 aa12.62□□□□□ -0.39
C6orf48-205ENST00000375640 OR10D4PQ8NGN7 298 aa12.62□□□□□ -0.39
C6orf48-205ENST00000375640 F8WDY8 70 aa12.61□□□□□ -0.39
C6orf48-205ENST00000375640 G0S2P27469 103 aa12.61□□□□□ -0.39
C6orf48-205ENST00000375640 SPAG11BQ08648 103 aa12.61□□□□□ -0.39
C6orf48-205ENST00000375640 C7orf33Q8WU49 177 aa12.61□□□□□ -0.39
C6orf48-205ENST00000375640 LOC107984640A0A0U1RRK4 108 aa12.6□□□□□ -0.39
C6orf48-205ENST00000375640 NPSP0C0P6 89 aa12.6□□□□□ -0.39
C6orf48-205ENST00000375640 KIAA1644Q3SXP7 199 aa12.6□□□□□ -0.39
C6orf48-205ENST00000375640 GNB1LQ9BYB4 327 aa12.6□□□□□ -0.39
C6orf48-205ENST00000375640 TGIF2-C20orf24A0A0A6YYL0 155 aa12.59□□□□□ -0.39
C6orf48-205ENST00000375640 OXTP01178 125 aa12.59□□□□□ -0.39
C6orf48-205ENST00000375640 LINC00242Q5T6M2 205 aa12.59□□□□□ -0.39
C6orf48-205ENST00000375640 Q6ZN92 141 aa12.59□□□□□ -0.39
C6orf48-205ENST00000375640 TEX43Q6ZNM6 134 aa12.59□□□□□ -0.39
C6orf48-205ENST00000375640 CARHSP1Q9Y2V2 147 aaKnown RBP12.59□□□□□ -0.39
C6orf48-205ENST00000375640 RNF151Q2KHN1 245 aa12.58□□□□□ -0.4
C6orf48-205ENST00000375640 COX19Q49B96 90 aa12.58□□□□□ -0.4
C6orf48-205ENST00000375640 ORAOV1Q8WV07 137 aa12.58□□□□□ -0.4
C6orf48-205ENST00000375640 C2orf88Q9BSF0 95 aa12.58□□□□□ -0.4
C6orf48-205ENST00000375640 VCX2Q9H322 139 aa12.58□□□□□ -0.4
C6orf48-205ENST00000375640 A0A087WZ39 114 aa12.57□□□□□ -0.4
C6orf48-205ENST00000375640 IGIPA6NJ69 53 aa12.57□□□□□ -0.4
C6orf48-205ENST00000375640 HNRNPA3P51991 378 aaKnown RBP12.57□□□□□ -0.4
C6orf48-205ENST00000375640 PTTG1IPP53801 180 aa12.57□□□□□ -0.4
C6orf48-205ENST00000375640 RHEBQ15382 184 aa12.57□□□□□ -0.4
C6orf48-205ENST00000375640 AMELXQ99217 191 aa12.57□□□□□ -0.4
C6orf48-205ENST00000375640 UBE2D1P51668 147 aa12.56□□□□□ -0.4
C6orf48-205ENST00000375640 GAGE2BQ13066 116 aa12.56□□□□□ -0.4
C6orf48-205ENST00000375640 MRPL35Q9NZE8 188 aaKnown RBP12.56□□□□□ -0.4
C6orf48-205ENST00000375640 RPS10P5Q9NQ39 176 aa12.55□□□□□ -0.4
C6orf48-205ENST00000375640 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.54□□□□□ -0.4
C6orf48-205ENST00000375640 PAPPA-AS1Q5QFB9 102 aa12.54□□□□□ -0.4
C6orf48-205ENST00000375640 LINC01561Q8N1V8 128 aa12.54□□□□□ -0.4
C6orf48-205ENST00000375640 NDUFA1O15239 70 aa12.53□□□□□ -0.4
C6orf48-205ENST00000375640 MT-ND6P03923 174 aa12.53□□□□□ -0.4
C6orf48-205ENST00000375640 TOMM6Q96B49 74 aa12.53□□□□□ -0.4
C6orf48-205ENST00000375640 ALKBH7Q9BT30 221 aaPredicted RBP12.53□□□□□ -0.4
C6orf48-205ENST00000375640 LRP1Q07954 4544 aaKnown RBP12.53□□□□□ -0.4
C6orf48-205ENST00000375640 ZC2HC1BQ5TFG8 222 aa12.52□□□□□ -0.41
C6orf48-205ENST00000375640 LINC00173Q6ZV60 143 aa12.52□□□□□ -0.41
C6orf48-205ENST00000375640 TIMM17AQ99595 171 aa12.52□□□□□ -0.41
C6orf48-205ENST00000375640 A0A0J9YXV3 536 aa12.51□□□□□ -0.41
C6orf48-205ENST00000375640 KIAA0087Q14695 138 aa12.51□□□□□ -0.41
C6orf48-205ENST00000375640 FAM19A3Q7Z5A8 133 aa12.51□□□□□ -0.41
C6orf48-205ENST00000375640 LINC01546A6NGU7 62 aa12.5□□□□□ -0.41
C6orf48-205ENST00000375640 LINC01549A6NIU2 74 aa12.5□□□□□ -0.41
C6orf48-205ENST00000375640 FABP9Q0Z7S8 132 aa12.5□□□□□ -0.41
C6orf48-205ENST00000375640 ERASQ7Z444 233 aa12.5□□□□□ -0.41
C6orf48-205ENST00000375640 MRPL18Q9H0U6 180 aaKnown RBP12.5□□□□□ -0.41
C6orf48-205ENST00000375640 FAT3Q8TDW7 4589 aa12.5□□□□□ -0.41
C6orf48-205ENST00000375640 SEC11AP67812 179 aa12.49□□□□□ -0.41
C6orf48-205ENST00000375640 RPL18AQ02543 176 aaKnown RBP12.49□□□□□ -0.41
C6orf48-205ENST00000375640 C10orf25Q5T742 122 aa12.49□□□□□ -0.41
C6orf48-205ENST00000375640 UNQ6190/PRO20217Q6UXQ8 127 aa12.49□□□□□ -0.41
C6orf48-205ENST00000375640 A0A1W2PNN7 141 aa12.48□□□□□ -0.41
C6orf48-205ENST00000375640 TLX1NBP0CAT3 122 aa12.48□□□□□ -0.41
C6orf48-205ENST00000375640 PRR3P79522 188 aaKnown RBP12.48□□□□□ -0.41
C6orf48-205ENST00000375640 SCGB3A1Q96QR1 104 aa12.48□□□□□ -0.41
C6orf48-205ENST00000375640 C9orf116Q5BN46 136 aaPredicted RBP12.47□□□□□ -0.41
C6orf48-205ENST00000375640 C6orf48Q9UBA6 75 aa12.47□□□□□ -0.41
C6orf48-205ENST00000375640 PKHD1L1Q86WI1 4243 aa12.47□□□□□ -0.41
C6orf48-205ENST00000375640 APOC3P02656 99 aa12.46□□□□□ -0.41
C6orf48-205ENST00000375640 HERVK_113P63121 156 aa12.46□□□□□ -0.41
C6orf48-205ENST00000375640 NDUFA5Q16718 116 aa12.45□□□□□ -0.42
C6orf48-205ENST00000375640 Q6ZRP5 223 aa12.45□□□□□ -0.42
C6orf48-205ENST00000375640 FA2HQ7L5A8 372 aa12.45□□□□□ -0.42
C6orf48-205ENST00000375640 TRBV30A0A0K0K1B3 111 aa12.44□□□□□ -0.42
C6orf48-205ENST00000375640 SNAPINO95295 136 aa12.44□□□□□ -0.42
C6orf48-205ENST00000375640 SVBPQ8N300 66 aa12.44□□□□□ -0.42
C6orf48-205ENST00000375640 GEMIN7Q9H840 131 aaKnown RBP12.44□□□□□ -0.42
C6orf48-205ENST00000375640 PRSS2P07478 247 aa12.43□□□□□ -0.42
C6orf48-205ENST00000375640 PACRGQ96M98 296 aaPredicted RBP12.43□□□□□ -0.42
C6orf48-205ENST00000375640 SMCO4Q9NRQ5 59 aa12.43□□□□□ -0.42
C6orf48-205ENST00000375640 TRAPPC1Q9Y5R8 145 aa12.43□□□□□ -0.42
C6orf48-205ENST00000375640 C6orf226Q5I0X4 101 aa12.42□□□□□ -0.42
C6orf48-205ENST00000375640 C2orf82Q6UX34 121 aa12.42□□□□□ -0.42
C6orf48-205ENST00000375640 CDKN2A-AS1Q9UH64 79 aa12.42□□□□□ -0.42
C6orf48-205ENST00000375640 CKS1BP61024 79 aa12.4□□□□□ -0.42
C6orf48-205ENST00000375640 Q8IZM0 81 aa12.4□□□□□ -0.42
C6orf48-205ENST00000375640 CST9LQ9H4G1 147 aa12.4□□□□□ -0.42
C6orf48-205ENST00000375640 TOMM7Q9P0U1 55 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms