RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 TEX15Q9BXT5 2789 aa9.28□□□□□ -0.92
PRPF4-201ENST00000374198 SMIM1B2RUZ4 78 aa9.28□□□□□ -0.92
PRPF4-201ENST00000374198 SPINK13Q1W4C9 94 aa9.28□□□□□ -0.92
PRPF4-201ENST00000374198 LINC00242Q5T6M2 205 aa9.28□□□□□ -0.92
PRPF4-201ENST00000374198 RBMY1BA6NDE4 496 aaKnown RBP9.28□□□□□ -0.92
PRPF4-201ENST00000374198 RBMY1EA6NEQ0 496 aaKnown RBP9.28□□□□□ -0.92
PRPF4-201ENST00000374198 NCR3O14931 201 aa9.28□□□□□ -0.92
PRPF4-201ENST00000374198 RBMY1DP0C7P1 496 aaKnown RBP9.28□□□□□ -0.92
PRPF4-201ENST00000374198 RBMY1A1P0DJD3 496 aaKnown RBP9.28□□□□□ -0.92
PRPF4-201ENST00000374198 RBMY1CP0DJD4 496 aa9.28□□□□□ -0.92
PRPF4-201ENST00000374198 EDN2P20800 178 aa9.28□□□□□ -0.92
PRPF4-201ENST00000374198 RBMY1FQ15415 496 aaKnown RBP9.28□□□□□ -0.92
PRPF4-201ENST00000374198 SERP1Q9Y6X1 66 aa9.28□□□□□ -0.92
PRPF4-201ENST00000374198 IGHV3OR16-12A0A075B7B8 117 aa9.27□□□□□ -0.93
PRPF4-201ENST00000374198 C20orf197Q8N268 126 aa9.27□□□□□ -0.93
PRPF4-201ENST00000374198 LINC00337Q8N6G1 96 aa9.27□□□□□ -0.93
PRPF4-201ENST00000374198 TRAV23DV6A0A075B6W5 121 aa9.27□□□□□ -0.93
PRPF4-201ENST00000374198 DGAT2L7PQ6IED9 249 aa9.27□□□□□ -0.93
PRPF4-201ENST00000374198 C1orf43Q9BWL3 253 aa9.27□□□□□ -0.93
PRPF4-201ENST00000374198 ANKRD17O75179 2603 aaKnown RBP9.26□□□□□ -0.93
PRPF4-201ENST00000374198 F8WDY8 70 aa9.26□□□□□ -0.93
PRPF4-201ENST00000374198 Q6ZSN1 163 aa9.26□□□□□ -0.93
PRPF4-201ENST00000374198 USMG5Q96IX5 58 aa9.26□□□□□ -0.93
PRPF4-201ENST00000374198 CCDC168Q8NDH2 2452 aa9.26□□□□□ -0.93
PRPF4-201ENST00000374198 IGHV3-38A0A0C4DH36 116 aa9.26□□□□□ -0.93
PRPF4-201ENST00000374198 XCL1P47992 114 aa9.26□□□□□ -0.93
PRPF4-201ENST00000374198 SMIM11BQ8TCY0 68 aa9.26□□□□□ -0.93
PRPF4-201ENST00000374198 XCL2Q9UBD3 114 aa9.26□□□□□ -0.93
PRPF4-201ENST00000374198 A0A1W2PPR1 153 aa9.25□□□□□ -0.93
PRPF4-201ENST00000374198 H0YGX0 51 aa9.25□□□□□ -0.93
PRPF4-201ENST00000374198 MOB4Q9Y3A3 225 aa9.25□□□□□ -0.93
PRPF4-201ENST00000374198 IGKV2-28A0A075B6P5 120 aa9.25□□□□□ -0.93
PRPF4-201ENST00000374198 KNCNA6PVL3 124 aa9.25□□□□□ -0.93
PRPF4-201ENST00000374198 IGKV2D-28P01615 120 aa9.25□□□□□ -0.93
PRPF4-201ENST00000374198 LRBAP50851 2863 aa9.25□□□□□ -0.93
PRPF4-201ENST00000374198 CCKP06307 115 aa9.24□□□□□ -0.93
PRPF4-201ENST00000374198 S100A7L2Q5SY68 101 aa9.24□□□□□ -0.93
PRPF4-201ENST00000374198 ATP5EP2Q5VTU8 51 aa9.24□□□□□ -0.93
PRPF4-201ENST00000374198 WFDC9Q8NEX5 89 aa9.24□□□□□ -0.93
PRPF4-201ENST00000374198 LECT2O14960 151 aa9.24□□□□□ -0.93
PRPF4-201ENST00000374198 RPL35AP18077 110 aaKnown RBP9.23□□□□□ -0.93
PRPF4-201ENST00000374198 FAM19A3Q7Z5A8 133 aa9.23□□□□□ -0.93
PRPF4-201ENST00000374198 FAM19A1Q7Z5A9 133 aa9.23□□□□□ -0.93
PRPF4-201ENST00000374198 MYO9AB2RTY4 2548 aa9.23□□□□□ -0.93
PRPF4-201ENST00000374198 H7BZZ5 65 aa9.23□□□□□ -0.93
PRPF4-201ENST00000374198 HTN1P15515 57 aa9.23□□□□□ -0.93
PRPF4-201ENST00000374198 PIMREGQ9BSJ6 248 aa9.23□□□□□ -0.93
PRPF4-201ENST00000374198 SND1-IT1Q9HBX3 110 aa9.23□□□□□ -0.93
PRPF4-201ENST00000374198 SVEP1Q4LDE5 3571 aa9.23□□□□□ -0.93
PRPF4-201ENST00000374198 PDZD2O15018 2839 aa9.22□□□□□ -0.93
PRPF4-201ENST00000374198 K7EMT4 169 aa9.22□□□□□ -0.93
PRPF4-201ENST00000374198 SNRPD3P62318 126 aaKnown RBP9.22□□□□□ -0.93
PRPF4-201ENST00000374198 CCL19Q99731 98 aa9.22□□□□□ -0.93
PRPF4-201ENST00000374198 MIR7-3HGQ8N6C7 128 aa9.22□□□□□ -0.93
PRPF4-201ENST00000374198 H3BUA1 57 aa9.21□□□□□ -0.93
PRPF4-201ENST00000374198 ENHOQ6UWT2 76 aa9.21□□□□□ -0.93
PRPF4-201ENST00000374198 C16orf95Q9H693 158 aa9.21□□□□□ -0.93
PRPF4-201ENST00000374198 HRNRQ86YZ3 2850 aaPredicted RBP9.21□□□□□ -0.94
PRPF4-201ENST00000374198 SLPIP03973 132 aa9.21□□□□□ -0.94
PRPF4-201ENST00000374198 SS18Q15532 418 aa9.21□□□□□ -0.94
PRPF4-201ENST00000374198 DEFB113Q30KQ7 82 aa9.21□□□□□ -0.94
PRPF4-201ENST00000374198 PKIGQ9Y2B9 76 aa9.21□□□□□ -0.94
PRPF4-201ENST00000374198 LYPD5Q6UWN5 251 aa9.2□□□□□ -0.94
PRPF4-201ENST00000374198 TMEM86BQ8N661 226 aa9.2□□□□□ -0.94
PRPF4-201ENST00000374198 RPL36AP83881 106 aaKnown RBP9.19□□□□□ -0.94
PRPF4-201ENST00000374198 RPL36ALQ969Q0 106 aaKnown RBP9.19□□□□□ -0.94
PRPF4-201ENST00000374198 ORMDL1Q9P0S3 153 aa9.19□□□□□ -0.94
PRPF4-201ENST00000374198 SMIM26A0A096LP01 95 aa9.19□□□□□ -0.94
PRPF4-201ENST00000374198 TRBV10-3A0A0K0K1G6 114 aa9.19□□□□□ -0.94
PRPF4-201ENST00000374198 CSMD2Q7Z408 3487 aa9.19□□□□□ -0.94
PRPF4-201ENST00000374198 FP248Q71RG6 208 aaPredicted RBP9.18□□□□□ -0.94
PRPF4-201ENST00000374198 K7EQG2 157 aa9.18□□□□□ -0.94
PRPF4-201ENST00000374198 IGHV3-53P01767 116 aa9.18□□□□□ -0.94
PRPF4-201ENST00000374198 C11orf71Q6IPW1 123 aa9.18□□□□□ -0.94
PRPF4-201ENST00000374198 TRAV7A0A075B6U4 112 aa9.17□□□□□ -0.94
PRPF4-201ENST00000374198 PRM2P04554 102 aa9.17□□□□□ -0.94
PRPF4-201ENST00000374198 Q96MF0 132 aa9.17□□□□□ -0.94
PRPF4-201ENST00000374198 WFDC11Q8NEX6 87 aa9.16□□□□□ -0.94
PRPF4-201ENST00000374198 JMJD7-PLA2G4BH0Y9G9 81 aa9.16□□□□□ -0.94
PRPF4-201ENST00000374198 BCE1O60756 84 aa9.16□□□□□ -0.94
PRPF4-201ENST00000374198 KLKP1Q107X0 134 aa9.16□□□□□ -0.94
PRPF4-201ENST00000374198 AVPP01185 164 aa9.15□□□□□ -0.94
PRPF4-201ENST00000374198 CCL18P55774 89 aa9.15□□□□□ -0.94
PRPF4-201ENST00000374198 OTOGQ6ZRI0 2925 aa9.14□□□□□ -0.95
PRPF4-201ENST00000374198 UBL5Q9BZL1 73 aa9.14□□□□□ -0.95
PRPF4-201ENST00000374198 IGLV1-40P01703 118 aa9.14□□□□□ -0.95
PRPF4-201ENST00000374198 LINC00158P58513 81 aa9.14□□□□□ -0.95
PRPF4-201ENST00000374198 COX7B2Q8TF08 81 aa9.13□□□□□ -0.95
PRPF4-201ENST00000374198 CDC42SE2Q9NRR3 84 aa9.13□□□□□ -0.95
PRPF4-201ENST00000374198 F8P00451 2351 aa9.13□□□□□ -0.95
PRPF4-201ENST00000374198 C11orf72Q8NBR9 251 aa9.12□□□□□ -0.95
PRPF4-201ENST00000374198 LY6EQ16553 131 aa9.12□□□□□ -0.95
PRPF4-201ENST00000374198 LINC00167Q96N53 147 aa9.12□□□□□ -0.95
PRPF4-201ENST00000374198 ITPR3Q14573 2671 aa9.11□□□□□ -0.95
PRPF4-201ENST00000374198 BLCAPP62952 87 aa9.11□□□□□ -0.95
PRPF4-201ENST00000374198 SNURFQ9Y675 71 aa9.11□□□□□ -0.95
PRPF4-201ENST00000374198 RMI2Q96E14 147 aa9.11□□□□□ -0.95
PRPF4-201ENST00000374198 F8WEM9 126 aa9.1□□□□□ -0.95
PRPF4-201ENST00000374198 PAX4O43316 350 aa9.1□□□□□ -0.95
PRPF4-201ENST00000374198 KRTAP1-3Q8IUG1 177 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms