RNA–Protein interactions for RNA: ENST00000373560.6

HDAC8-204, Transcript of histone deacetylase 8, humanhuman

TSL 3 BASIC

Gene HDAC8, Length 819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-204ENST00000373560 SEC61BP60468 96 aaKnown RBP6.91□□□□□ -1.3
HDAC8-204ENST00000373560 BAGE2Q86Y30 109 aa6.91□□□□□ -1.3
HDAC8-204ENST00000373560 C11orf52Q96A22 123 aa6.91□□□□□ -1.3
HDAC8-204ENST00000373560 SEC11CQ9BY50 192 aa6.91□□□□□ -1.3
HDAC8-204ENST00000373560 SNAI2O43623 268 aa6.9□□□□□ -1.3
HDAC8-204ENST00000373560 SRP19P09132 144 aaKnown RBP6.9□□□□□ -1.3
HDAC8-204ENST00000373560 RNASEKQ6P5S7 137 aaKnown RBP6.9□□□□□ -1.3
HDAC8-204ENST00000373560 ISOC2Q96AB3 205 aa6.9□□□□□ -1.3
HDAC8-204ENST00000373560 F8W036 122 aa6.89□□□□□ -1.31
HDAC8-204ENST00000373560 ZNF727A8MUV8 499 aa6.88□□□□□ -1.31
HDAC8-204ENST00000373560 PNRC1Q12796 327 aaPredicted RBP6.88□□□□□ -1.31
HDAC8-204ENST00000373560 COTL1Q14019 142 aa6.88□□□□□ -1.31
HDAC8-204ENST00000373560 CENPWQ5EE01 88 aa6.88□□□□□ -1.31
HDAC8-204ENST00000373560 SPANXN1Q5VSR9 72 aa6.88□□□□□ -1.31
HDAC8-204ENST00000373560 AMMECR1LQ6DCA0 310 aa6.88□□□□□ -1.31
HDAC8-204ENST00000373560 LINC00337Q8N6G1 96 aa6.88□□□□□ -1.31
HDAC8-204ENST00000373560 SMIM12Q96EX1 92 aa6.88□□□□□ -1.31
HDAC8-204ENST00000373560 BIN3Q9NQY0 253 aa6.88□□□□□ -1.31
HDAC8-204ENST00000373560 TRBV20OR9-2A0A075B6H5 130 aa6.87□□□□□ -1.31
HDAC8-204ENST00000373560 KRTAP4-16G5E9R7 235 aaPredicted RBP6.87□□□□□ -1.31
HDAC8-204ENST00000373560 ATP6V1G1O75348 118 aa6.87□□□□□ -1.31
HDAC8-204ENST00000373560 TMEM241Q24JQ0 296 aa6.87□□□□□ -1.31
HDAC8-204ENST00000373560 C10orf91Q5T1B1 145 aa6.87□□□□□ -1.31
HDAC8-204ENST00000373560 SVBPQ8N300 66 aa6.87□□□□□ -1.31
HDAC8-204ENST00000373560 AP1S3Q96PC3 154 aa6.87□□□□□ -1.31
HDAC8-204ENST00000373560 NAT8Q9UHE5 227 aa6.87□□□□□ -1.31
HDAC8-204ENST00000373560 GNG4P50150 75 aa6.86□□□□□ -1.31
HDAC8-204ENST00000373560 CEBPGP53567 150 aa6.86□□□□□ -1.31
HDAC8-204ENST00000373560 SMIM7Q9BQ49 75 aa6.86□□□□□ -1.31
HDAC8-204ENST00000373560 C19orf71A6NCJ1 209 aa6.85□□□□□ -1.31
HDAC8-204ENST00000373560 C9JQL5 133 aa6.85□□□□□ -1.31
HDAC8-204ENST00000373560 SNAPINO95295 136 aa6.85□□□□□ -1.31
HDAC8-204ENST00000373560 CXCL1P09341 107 aa6.85□□□□□ -1.31
HDAC8-204ENST00000373560 OR5AL1P0C617 328 aa6.85□□□□□ -1.31
HDAC8-204ENST00000373560 SMIM17P0DL12 118 aa6.85□□□□□ -1.31
HDAC8-204ENST00000373560 C10orf25Q5T742 122 aa6.85□□□□□ -1.31
HDAC8-204ENST00000373560 RASL11AQ6T310 242 aa6.85□□□□□ -1.31
HDAC8-204ENST00000373560 CD164L2Q6UWJ8 174 aa6.85□□□□□ -1.31
HDAC8-204ENST00000373560 M0R2T5 61 aa6.84□□□□□ -1.31
HDAC8-204ENST00000373560 APOC3P02656 99 aa6.84□□□□□ -1.31
HDAC8-204ENST00000373560 SS18Q15532 418 aa6.84□□□□□ -1.31
HDAC8-204ENST00000373560 GAGE2EQ4V326 116 aa6.84□□□□□ -1.31
HDAC8-204ENST00000373560 LINC00242Q5T6M2 205 aa6.84□□□□□ -1.31
HDAC8-204ENST00000373560 GAGE2DQ9UEU5 116 aa6.84□□□□□ -1.31
HDAC8-204ENST00000373560 NTF3P20783 257 aa6.83□□□□□ -1.32
HDAC8-204ENST00000373560 RHEBQ15382 184 aa6.83□□□□□ -1.32
HDAC8-204ENST00000373560 C2orf48Q96LS8 159 aa6.83□□□□□ -1.32
HDAC8-204ENST00000373560 CTDSP1Q9GZU7 261 aa6.83□□□□□ -1.32
HDAC8-204ENST00000373560 PPP1R2P9O14990 202 aa6.82□□□□□ -1.32
HDAC8-204ENST00000373560 ESDP10768 282 aa6.82□□□□□ -1.32
HDAC8-204ENST00000373560 SPAG11BQ08648 103 aa6.82□□□□□ -1.32
HDAC8-204ENST00000373560 OR2D3Q8NGH3 330 aa6.82□□□□□ -1.32
HDAC8-204ENST00000373560 NIT2Q9NQR4 276 aa6.82□□□□□ -1.32
HDAC8-204ENST00000373560 K7EN84 100 aa6.81□□□□□ -1.32
HDAC8-204ENST00000373560 MT-ND4LP03901 98 aa6.81□□□□□ -1.32
HDAC8-204ENST00000373560 ADCYAP1P18509 176 aa6.81□□□□□ -1.32
HDAC8-204ENST00000373560 RPS20P60866 119 aaKnown RBP6.81□□□□□ -1.32
HDAC8-204ENST00000373560 OCC1Q8TAD7 63 aa6.81□□□□□ -1.32
HDAC8-204ENST00000373560 TPPP3Q9BW30 176 aa6.81□□□□□ -1.32
HDAC8-204ENST00000373560 TMEM242Q9NWH2 141 aa6.81□□□□□ -1.32
HDAC8-204ENST00000373560 COX7A2LO14548 114 aa6.8□□□□□ -1.32
HDAC8-204ENST00000373560 IGLC6P0CF74 106 aa6.8□□□□□ -1.32
HDAC8-204ENST00000373560 RPL23P62829 140 aaKnown RBP6.8□□□□□ -1.32
HDAC8-204ENST00000373560 ADIRFQ15847 76 aa6.8□□□□□ -1.32
HDAC8-204ENST00000373560 C9orf129Q5T035 196 aaKnown RBP6.8□□□□□ -1.32
HDAC8-204ENST00000373560 FP248Q71RG6 208 aaPredicted RBP6.8□□□□□ -1.32
HDAC8-204ENST00000373560 C5orf38Q86SI9 138 aa6.8□□□□□ -1.32
HDAC8-204ENST00000373560 LINC01551Q86U37 167 aa6.8□□□□□ -1.32
HDAC8-204ENST00000373560 RNASE7Q9H1E1 156 aaKnown RBP6.8□□□□□ -1.32
HDAC8-204ENST00000373560 C6orf48Q9UBA6 75 aa6.8□□□□□ -1.32
HDAC8-204ENST00000373560 XKRY2A2RUG3 117 aa6.79□□□□□ -1.32
HDAC8-204ENST00000373560 FAM231DQ6ZW35 169 aa6.79□□□□□ -1.32
HDAC8-204ENST00000373560 OSTCQ9NRP0 149 aa6.79□□□□□ -1.32
HDAC8-204ENST00000373560 MRPL35Q9NZE8 188 aaKnown RBP6.79□□□□□ -1.32
HDAC8-204ENST00000373560 TLX1NBP0CAT3 122 aa6.78□□□□□ -1.32
HDAC8-204ENST00000373560 UNQ6190/PRO20217Q6UXQ8 127 aa6.78□□□□□ -1.32
HDAC8-204ENST00000373560 RPL39LQ96EH5 51 aaKnown RBP6.78□□□□□ -1.32
HDAC8-204ENST00000373560 BTF3L4Q96K17 158 aa6.78□□□□□ -1.32
HDAC8-204ENST00000373560 IMMP2LQ96T52 175 aa6.78□□□□□ -1.32
HDAC8-204ENST00000373560 C7orf77A4D0Y5 90 aa6.77□□□□□ -1.33
HDAC8-204ENST00000373560 APCSP02743 223 aa6.77□□□□□ -1.33
HDAC8-204ENST00000373560 NPSP0C0P6 89 aa6.77□□□□□ -1.33
HDAC8-204ENST00000373560 ZNF25P17030 456 aaPredicted RBP6.77□□□□□ -1.33
HDAC8-204ENST00000373560 RNASE13Q5GAN3 156 aaKnown RBP6.77□□□□□ -1.33
HDAC8-204ENST00000373560 LYZL1Q6UWQ5 148 aa6.77□□□□□ -1.33
HDAC8-204ENST00000373560 C3orf22Q8N5N4 141 aa6.77□□□□□ -1.33
HDAC8-204ENST00000373560 RPS10P5Q9NQ39 176 aa6.77□□□□□ -1.33
HDAC8-204ENST00000373560 F2Z2F3 143 aa6.76□□□□□ -1.33
HDAC8-204ENST00000373560 H7C423 109 aa6.76□□□□□ -1.33
HDAC8-204ENST00000373560 NUPR1O60356 82 aa6.76□□□□□ -1.33
HDAC8-204ENST00000373560 S100PP25815 95 aa6.76□□□□□ -1.33
HDAC8-204ENST00000373560 CTRLP40313 264 aa6.76□□□□□ -1.33
HDAC8-204ENST00000373560 GATD1Q8NB37 220 aa6.76□□□□□ -1.33
HDAC8-204ENST00000373560 SMCO4Q9NRQ5 59 aa6.76□□□□□ -1.33
HDAC8-204ENST00000373560 CDC42SE2Q9NRR3 84 aa6.76□□□□□ -1.33
HDAC8-204ENST00000373560 A8MWL6 223 aa6.75□□□□□ -1.33
HDAC8-204ENST00000373560 GATCO43716 136 aaKnown RBP6.75□□□□□ -1.33
HDAC8-204ENST00000373560 RPL28P46779 137 aaKnown RBP6.75□□□□□ -1.33
HDAC8-204ENST00000373560 FAM229BQ4G0N7 80 aa6.75□□□□□ -1.33
HDAC8-204ENST00000373560 CNFNQ9BYD5 112 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms