RNA–Protein interactions for RNA: ENST00000372330.3

MMP9-201, Transcript of matrix metallopeptidase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP9, Length 2,336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP9-201ENST00000372330 SMIM1B2RUZ4 78 aa13.14□□□□□ -0.31
MMP9-201ENST00000372330 PIK3CD-AS1Q5SR53 167 aa13.14□□□□□ -0.31
MMP9-201ENST00000372330 C9orf129Q5T035 196 aaKnown RBP13.14□□□□□ -0.31
MMP9-201ENST00000372330 LINC00242Q5T6M2 205 aa13.14□□□□□ -0.31
MMP9-201ENST00000372330 CFHR3Q02985 330 aa13.14□□□□□ -0.31
MMP9-201ENST00000372330 ZANQ9Y493 2812 aa13.13□□□□□ -0.31
MMP9-201ENST00000372330 TRBV10-3A0A0K0K1G6 114 aa13.13□□□□□ -0.31
MMP9-201ENST00000372330 SNRPD3P62318 126 aaKnown RBP13.13□□□□□ -0.31
MMP9-201ENST00000372330 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.13□□□□□ -0.31
MMP9-201ENST00000372330 A0A087WYN8 130 aa13.13□□□□□ -0.31
MMP9-201ENST00000372330 BCE1O60756 84 aa13.13□□□□□ -0.31
MMP9-201ENST00000372330 CCKP06307 115 aa13.13□□□□□ -0.31
MMP9-201ENST00000372330 FBN2P35556 2912 aa13.13□□□□□ -0.31
MMP9-201ENST00000372330 CSPG4Q6UVK1 2322 aa13.12□□□□□ -0.31
MMP9-201ENST00000372330 IGHV3-73A0A0B4J1V6 119 aa13.12□□□□□ -0.31
MMP9-201ENST00000372330 LINC00336Q6ZUF6 198 aa13.12□□□□□ -0.31
MMP9-201ENST00000372330 IGHV3OR16-12A0A075B7B8 117 aa13.12□□□□□ -0.31
MMP9-201ENST00000372330 J3QLI3 93 aa13.12□□□□□ -0.31
MMP9-201ENST00000372330 PROK1P58294 105 aa13.12□□□□□ -0.31
MMP9-201ENST00000372330 ZNF843Q8N446 348 aa13.12□□□□□ -0.31
MMP9-201ENST00000372330 XCL1P47992 114 aa13.11□□□□□ -0.31
MMP9-201ENST00000372330 SPINK13Q1W4C9 94 aa13.11□□□□□ -0.31
MMP9-201ENST00000372330 XCL2Q9UBD3 114 aa13.11□□□□□ -0.31
MMP9-201ENST00000372330 IGKV3-20P01619 116 aa13.11□□□□□ -0.31
MMP9-201ENST00000372330 POLQO75417 2590 aa13.1□□□□□ -0.31
MMP9-201ENST00000372330 C20orf197Q8N268 126 aa13.1□□□□□ -0.31
MMP9-201ENST00000372330 LINC00337Q8N6G1 96 aa13.1□□□□□ -0.31
MMP9-201ENST00000372330 FAM208BQ5VWN6 2430 aa13.1□□□□□ -0.31
MMP9-201ENST00000372330 CENPEQ02224 2701 aa13.1□□□□□ -0.31
MMP9-201ENST00000372330 DSCR9P59020 149 aa13.1□□□□□ -0.31
MMP9-201ENST00000372330 LYPD5Q6UWN5 251 aa13.1□□□□□ -0.31
MMP9-201ENST00000372330 SMIM11BQ8TCY0 68 aa13.1□□□□□ -0.31
MMP9-201ENST00000372330 C1orf43Q9BWL3 253 aa13.09□□□□□ -0.31
MMP9-201ENST00000372330 EDN2P20800 178 aa13.08□□□□□ -0.31
MMP9-201ENST00000372330 NCR3O14931 201 aa13.08□□□□□ -0.32
MMP9-201ENST00000372330 SND1-IT1Q9HBX3 110 aa13.08□□□□□ -0.32
MMP9-201ENST00000372330 TRAV23DV6A0A075B6W5 121 aa13.07□□□□□ -0.32
MMP9-201ENST00000372330 USP9YO00507 2555 aaPredicted RBP13.07□□□□□ -0.32
MMP9-201ENST00000372330 IGKV2-28A0A075B6P5 120 aa13.07□□□□□ -0.32
MMP9-201ENST00000372330 SMIM26A0A096LP01 95 aa13.07□□□□□ -0.32
MMP9-201ENST00000372330 JMJD7-PLA2G4BH0Y9G9 81 aa13.07□□□□□ -0.32
MMP9-201ENST00000372330 IGKV2D-28P01615 120 aa13.07□□□□□ -0.32
MMP9-201ENST00000372330 LECT2O14960 151 aa13.06□□□□□ -0.32
MMP9-201ENST00000372330 IGHV4-59P01825 116 aa13.06□□□□□ -0.32
MMP9-201ENST00000372330 DEFB112Q30KQ8 113 aa13.06□□□□□ -0.32
MMP9-201ENST00000372330 IGHV3-53P01767 116 aa13.06□□□□□ -0.32
MMP9-201ENST00000372330 HILS1P60008 231 aa13.06□□□□□ -0.32
MMP9-201ENST00000372330 ORMDL1Q9P0S3 153 aa13.06□□□□□ -0.32
MMP9-201ENST00000372330 UBR5O95071 2799 aaPredicted RBP13.06□□□□□ -0.32
MMP9-201ENST00000372330 LRRK2Q5S007 2527 aa13.05□□□□□ -0.32
MMP9-201ENST00000372330 H7BZZ5 65 aa13.05□□□□□ -0.32
MMP9-201ENST00000372330 Q9UF83 564 aa13.05□□□□□ -0.32
MMP9-201ENST00000372330 EPG5Q9HCE0 2579 aa13.05□□□□□ -0.32
MMP9-201ENST00000372330 Q6ZSN1 163 aa13.05□□□□□ -0.32
MMP9-201ENST00000372330 LINC01356Q8N9X3 169 aa13.05□□□□□ -0.32
MMP9-201ENST00000372330 KNCNA6PVL3 124 aa13.04□□□□□ -0.32
MMP9-201ENST00000372330 TRAV7A0A075B6U4 112 aa13.04□□□□□ -0.32
MMP9-201ENST00000372330 K7EQG2 157 aa13.04□□□□□ -0.32
MMP9-201ENST00000372330 ANKRD17O75179 2603 aaKnown RBP13.03□□□□□ -0.32
MMP9-201ENST00000372330 IGHV3-38A0A0C4DH36 116 aa13.03□□□□□ -0.32
MMP9-201ENST00000372330 C10orf99Q6UWK7 81 aa13.03□□□□□ -0.32
MMP9-201ENST00000372330 MIR7-3HGQ8N6C7 128 aa13.03□□□□□ -0.32
MMP9-201ENST00000372330 KLKP1Q107X0 134 aa13.02□□□□□ -0.32
MMP9-201ENST00000372330 MAPK1IP1LQ8NDC0 245 aa13.02□□□□□ -0.32
MMP9-201ENST00000372330 A0A096LNT2 108 aa13.01□□□□□ -0.33
MMP9-201ENST00000372330 TMEM89A2RUT3 159 aa13.01□□□□□ -0.33
MMP9-201ENST00000372330 RPL36AP83881 106 aaKnown RBP13.01□□□□□ -0.33
MMP9-201ENST00000372330 RPL36ALQ969Q0 106 aaKnown RBP13.01□□□□□ -0.33
MMP9-201ENST00000372330 ENHOQ6UWT2 76 aa13.01□□□□□ -0.33
MMP9-201ENST00000372330 UBL5Q9BZL1 73 aa13.01□□□□□ -0.33
MMP9-201ENST00000372330 TMEM86BQ8N661 226 aa13□□□□□ -0.33
MMP9-201ENST00000372330 C16orf95Q9H693 158 aa13□□□□□ -0.33
MMP9-201ENST00000372330 MXRA5Q9NR99 2828 aa13□□□□□ -0.33
MMP9-201ENST00000372330 RPL35AP18077 110 aaKnown RBP13□□□□□ -0.33
MMP9-201ENST00000372330 SS18Q15532 418 aa13□□□□□ -0.33
MMP9-201ENST00000372330 FAM19A1Q7Z5A9 133 aa13□□□□□ -0.33
MMP9-201ENST00000372330 HTN1P15515 57 aa12.99□□□□□ -0.33
MMP9-201ENST00000372330 KRTAP10-9P60411 292 aa12.98□□□□□ -0.33
MMP9-201ENST00000372330 DOPEY2Q9Y3R5 2298 aa12.98□□□□□ -0.33
MMP9-201ENST00000372330 WFDC9Q8NEX5 89 aa12.97□□□□□ -0.33
MMP9-201ENST00000372330 LINC00167Q96N53 147 aa12.97□□□□□ -0.33
MMP9-201ENST00000372330 TMEM256-PLSCR3K7ERE1 68 aa12.96□□□□□ -0.34
MMP9-201ENST00000372330 CCL18P55774 89 aa12.95□□□□□ -0.34
MMP9-201ENST00000372330 FP248Q71RG6 208 aaPredicted RBP12.95□□□□□ -0.34
MMP9-201ENST00000372330 CDC42SE2Q9NRR3 84 aa12.95□□□□□ -0.34
MMP9-201ENST00000372330 PTPN13Q12923 2485 aa12.95□□□□□ -0.34
MMP9-201ENST00000372330 NDUFC1O43677 76 aa12.95□□□□□ -0.34
MMP9-201ENST00000372330 SLPIP03973 132 aa12.95□□□□□ -0.34
MMP9-201ENST00000372330 COX7B2Q8TF08 81 aa12.95□□□□□ -0.34
MMP9-201ENST00000372330 LINC00158P58513 81 aa12.94□□□□□ -0.34
MMP9-201ENST00000372330 PKIGQ9Y2B9 76 aa12.94□□□□□ -0.34
MMP9-201ENST00000372330 ABCA12Q86UK0 2595 aa12.94□□□□□ -0.34
MMP9-201ENST00000372330 ATP5EP56381 51 aaPredicted RBP12.94□□□□□ -0.34
MMP9-201ENST00000372330 IBA57-AS1B1ANH7 110 aa12.93□□□□□ -0.34
MMP9-201ENST00000372330 Q96MF0 132 aa12.93□□□□□ -0.34
MMP9-201ENST00000372330 LY6G6DO95868 133 aa12.92□□□□□ -0.34
MMP9-201ENST00000372330 Q6YL49 198 aa12.92□□□□□ -0.34
MMP9-201ENST00000372330 FSHBP01225 129 aa12.91□□□□□ -0.34
MMP9-201ENST00000372330 UBE2E2Q96LR5 201 aa12.91□□□□□ -0.34
MMP9-201ENST00000372330 ZNF702PQ9H963 129 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms