RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 CRYBG3Q68DQ2 2970 aa6.41□□□□□ -1.38
ATG4A-203ENST00000372232 IGHV3OR16-13A0A075B7E8 117 aa6.41□□□□□ -1.38
ATG4A-203ENST00000372232 IGHV3-74A0A0B4J1X5 117 aa6.41□□□□□ -1.38
ATG4A-203ENST00000372232 PRAC2D3DTV9 90 aa6.41□□□□□ -1.38
ATG4A-203ENST00000372232 IGF1P05019 195 aa6.41□□□□□ -1.38
ATG4A-203ENST00000372232 MSMBP08118 114 aa6.41□□□□□ -1.38
ATG4A-203ENST00000372232 RPL28P46779 137 aaKnown RBP6.41□□□□□ -1.38
ATG4A-203ENST00000372232 POLR2KP53803 58 aaKnown RBP6.41□□□□□ -1.38
ATG4A-203ENST00000372232 ATP5EP56381 51 aaPredicted RBP6.41□□□□□ -1.38
ATG4A-203ENST00000372232 SS18Q15532 418 aa6.41□□□□□ -1.38
ATG4A-203ENST00000372232 OBSCN-AS1Q96MR7 158 aa6.41□□□□□ -1.38
ATG4A-203ENST00000372232 UTP20O75691 2785 aaKnown RBP6.4□□□□□ -1.38
ATG4A-203ENST00000372232 ATP5EP2Q5VTU8 51 aa6.4□□□□□ -1.38
ATG4A-203ENST00000372232 CSMD2Q7Z408 3487 aa6.39□□□□□ -1.39
ATG4A-203ENST00000372232 IGHV4OR15-8A0A075B7B6 117 aa6.39□□□□□ -1.39
ATG4A-203ENST00000372232 A0A087WW49 117 aa6.39□□□□□ -1.39
ATG4A-203ENST00000372232 IGHV3-49A0A0A0MS15 119 aa6.39□□□□□ -1.39
ATG4A-203ENST00000372232 TRBV12-3P01733 135 aa6.39□□□□□ -1.39
ATG4A-203ENST00000372232 MED14OSP0DP75 135 aa6.39□□□□□ -1.39
ATG4A-203ENST00000372232 LY6EQ16553 131 aa6.39□□□□□ -1.39
ATG4A-203ENST00000372232 MAP6D1Q9H9H5 199 aa6.39□□□□□ -1.39
ATG4A-203ENST00000372232 PRRC2AP48634 2157 aaKnown RBP6.39□□□□□ -1.39
ATG4A-203ENST00000372232 TRBV27A0A0K0K1C4 114 aa6.39□□□□□ -1.39
ATG4A-203ENST00000372232 A6NDX4 124 aa6.39□□□□□ -1.39
ATG4A-203ENST00000372232 H3BUX3 64 aa6.39□□□□□ -1.39
ATG4A-203ENST00000372232 NXPH4O95158 308 aa6.39□□□□□ -1.39
ATG4A-203ENST00000372232 MGPP08493 103 aa6.39□□□□□ -1.39
ATG4A-203ENST00000372232 HILS1P60008 231 aa6.39□□□□□ -1.39
ATG4A-203ENST00000372232 Q75L30 129 aa6.39□□□□□ -1.39
ATG4A-203ENST00000372232 NDUFA12Q9UI09 145 aa6.39□□□□□ -1.39
ATG4A-203ENST00000372232 USP9YO00507 2555 aaPredicted RBP6.38□□□□□ -1.39
ATG4A-203ENST00000372232 TRAV7A0A075B6U4 112 aa6.38□□□□□ -1.39
ATG4A-203ENST00000372232 NACAE9PAV3 2078 aa6.38□□□□□ -1.39
ATG4A-203ENST00000372232 B4DSR2 109 aa6.38□□□□□ -1.39
ATG4A-203ENST00000372232 CD164L2Q6UWJ8 174 aa6.38□□□□□ -1.39
ATG4A-203ENST00000372232 LAMTOR3Q9UHA4 124 aa6.38□□□□□ -1.39
ATG4A-203ENST00000372232 BAHCC1Q9P281 2608 aa6.38□□□□□ -1.39
ATG4A-203ENST00000372232 TRAV23DV6A0A075B6W5 121 aa6.37□□□□□ -1.39
ATG4A-203ENST00000372232 IGHV1-58A0A0C4DH39 117 aa6.37□□□□□ -1.39
ATG4A-203ENST00000372232 A0A0J9YXV3 536 aa6.37□□□□□ -1.39
ATG4A-203ENST00000372232 H3BUA1 57 aa6.37□□□□□ -1.39
ATG4A-203ENST00000372232 DSCR9P59020 149 aa6.37□□□□□ -1.39
ATG4A-203ENST00000372232 BLCAPP62952 87 aa6.37□□□□□ -1.39
ATG4A-203ENST00000372232 RBM3P98179 157 aaKnown RBP6.37□□□□□ -1.39
ATG4A-203ENST00000372232 UNQ9165/PRO28630Q6UXU0 137 aa6.37□□□□□ -1.39
ATG4A-203ENST00000372232 USMG5Q96IX5 58 aa6.37□□□□□ -1.39
ATG4A-203ENST00000372232 FAM218AQ96MZ4 157 aa6.37□□□□□ -1.39
ATG4A-203ENST00000372232 PTPN13Q12923 2485 aa6.37□□□□□ -1.39
ATG4A-203ENST00000372232 TRBV10-3A0A0K0K1G6 114 aa6.37□□□□□ -1.39
ATG4A-203ENST00000372232 PLAC8L1A1L4L8 177 aa6.37□□□□□ -1.39
ATG4A-203ENST00000372232 SNRPD3P62318 126 aaKnown RBP6.37□□□□□ -1.39
ATG4A-203ENST00000372232 S100A7L2Q5SY68 101 aa6.37□□□□□ -1.39
ATG4A-203ENST00000372232 C14orf132Q9NPU4 83 aa6.37□□□□□ -1.39
ATG4A-203ENST00000372232 NDUFA4O00483 81 aa6.36□□□□□ -1.39
ATG4A-203ENST00000372232 PIK3CD-AS1Q5SR53 167 aa6.36□□□□□ -1.39
ATG4A-203ENST00000372232 UNC79Q9P2D8 2635 aa6.36□□□□□ -1.39
ATG4A-203ENST00000372232 NDUFC1O43677 76 aa6.36□□□□□ -1.39
ATG4A-203ENST00000372232 C9orf47Q6ZRZ4 202 aa6.36□□□□□ -1.39
ATG4A-203ENST00000372232 HECTD1Q9ULT8 2610 aa6.36□□□□□ -1.39
ATG4A-203ENST00000372232 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.35□□□□□ -1.39
ATG4A-203ENST00000372232 FBN2P35556 2912 aa6.35□□□□□ -1.39
ATG4A-203ENST00000372232 IBA57-AS1B1ANH7 110 aa6.35□□□□□ -1.39
ATG4A-203ENST00000372232 F8WEM9 126 aa6.35□□□□□ -1.39
ATG4A-203ENST00000372232 IGHV3-11P01762 117 aa6.35□□□□□ -1.39
ATG4A-203ENST00000372232 LINC00315P59091 139 aa6.35□□□□□ -1.39
ATG4A-203ENST00000372232 OPRPNQ99935 248 aaPredicted RBP6.35□□□□□ -1.39
ATG4A-203ENST00000372232 KIF25-AS1Q9Y6Z4 181 aa6.35□□□□□ -1.39
ATG4A-203ENST00000372232 CENPEQ02224 2701 aa6.35□□□□□ -1.39
ATG4A-203ENST00000372232 TRAV13-2A0A0B4J235 113 aa6.34□□□□□ -1.39
ATG4A-203ENST00000372232 DOPEY2Q9Y3R5 2298 aa6.34□□□□□ -1.39
ATG4A-203ENST00000372232 A0A096LNT2 108 aa6.34□□□□□ -1.39
ATG4A-203ENST00000372232 TRBV6-5A0A0K0K1A5 114 aa6.34□□□□□ -1.39
ATG4A-203ENST00000372232 C9orf129Q5T035 196 aaKnown RBP6.34□□□□□ -1.39
ATG4A-203ENST00000372232 OVOL2Q9BRP0 275 aa6.34□□□□□ -1.39
ATG4A-203ENST00000372232 PHLDA3Q9Y5J5 127 aa6.34□□□□□ -1.39
ATG4A-203ENST00000372232 CSPG4Q6UVK1 2322 aa6.34□□□□□ -1.4
ATG4A-203ENST00000372232 IGLV4-3A0A075B6K6 122 aa6.33□□□□□ -1.4
ATG4A-203ENST00000372232 LINC00308Q8TCZ7 52 aa6.33□□□□□ -1.4
ATG4A-203ENST00000372232 Q9HAA7 133 aa6.33□□□□□ -1.4
ATG4A-203ENST00000372232 POLQO75417 2590 aa6.33□□□□□ -1.4
ATG4A-203ENST00000372232 SOCS3O14543 225 aa6.33□□□□□ -1.4
ATG4A-203ENST00000372232 PAX4O43316 350 aa6.33□□□□□ -1.4
ATG4A-203ENST00000372232 RNASE4P34096 147 aaKnown RBP6.33□□□□□ -1.4
ATG4A-203ENST00000372232 RMI2Q96E14 147 aa6.33□□□□□ -1.4
ATG4A-203ENST00000372232 ZANQ9Y493 2812 aa6.33□□□□□ -1.4
ATG4A-203ENST00000372232 FLNBO75369 2602 aaKnown RBP6.33□□□□□ -1.4
ATG4A-203ENST00000372232 IGHV4-59P01825 116 aa6.32□□□□□ -1.4
ATG4A-203ENST00000372232 DEFB112Q30KQ8 113 aa6.32□□□□□ -1.4
ATG4A-203ENST00000372232 PRR9Q5T870 116 aa6.32□□□□□ -1.4
ATG4A-203ENST00000372232 SUMO4Q6EEV6 95 aa6.32□□□□□ -1.4
ATG4A-203ENST00000372232 S100A4P26447 101 aaKnown RBP6.32□□□□□ -1.4
ATG4A-203ENST00000372232 DEFB104AQ8WTQ1 72 aa6.32□□□□□ -1.4
ATG4A-203ENST00000372232 LENEPQ9Y5L5 61 aa6.32□□□□□ -1.4
ATG4A-203ENST00000372232 NDUFA1O15239 70 aa6.31□□□□□ -1.4
ATG4A-203ENST00000372232 FAM229BQ4G0N7 80 aa6.31□□□□□ -1.4
ATG4A-203ENST00000372232 C20orf203Q8NBC4 194 aa6.31□□□□□ -1.4
ATG4A-203ENST00000372232 RHPN1-AS1Q9BWJ2 59 aa6.31□□□□□ -1.4
ATG4A-203ENST00000372232 ANKRD17O75179 2603 aaKnown RBP6.31□□□□□ -1.4
ATG4A-203ENST00000372232 ENHOQ6UWT2 76 aa6.31□□□□□ -1.4
ATG4A-203ENST00000372232 MAPK1IP1LQ8NDC0 245 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms