RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 SMIM1B2RUZ4 78 aa12.48□□□□□ -0.41
PTP4A1-201ENST00000370651 SVIPQ8NHG7 77 aa12.47□□□□□ -0.41
PTP4A1-201ENST00000370651 MRGPRG-AS1Q2M3A8 158 aa12.47□□□□□ -0.41
PTP4A1-201ENST00000370651 ADAMTSL4-AS1Q5T5F5 129 aa12.47□□□□□ -0.41
PTP4A1-201ENST00000370651 LINC00526Q96FQ7 95 aa12.47□□□□□ -0.41
PTP4A1-201ENST00000370651 B9D2Q9BPU9 175 aa12.47□□□□□ -0.41
PTP4A1-201ENST00000370651 NCOR2Q9Y618 2525 aa12.46□□□□□ -0.41
PTP4A1-201ENST00000370651 C11orf45Q8TAV5 145 aa12.46□□□□□ -0.42
PTP4A1-201ENST00000370651 RPL28P46779 137 aaKnown RBP12.45□□□□□ -0.42
PTP4A1-201ENST00000370651 C18orf65Q6ZTR6 163 aa12.45□□□□□ -0.42
PTP4A1-201ENST00000370651 ZNF580Q9UK33 172 aa12.45□□□□□ -0.42
PTP4A1-201ENST00000370651 IGKV4-1P06312 121 aa12.45□□□□□ -0.42
PTP4A1-201ENST00000370651 Q8IZM0 81 aa12.45□□□□□ -0.42
PTP4A1-201ENST00000370651 EDN2P20800 178 aa12.45□□□□□ -0.42
PTP4A1-201ENST00000370651 SYCNQ0VAF6 134 aa12.45□□□□□ -0.42
PTP4A1-201ENST00000370651 LINC00482Q8N8I6 264 aa12.44□□□□□ -0.42
PTP4A1-201ENST00000370651 CHCHD7Q9BUK0 85 aa12.44□□□□□ -0.42
PTP4A1-201ENST00000370651 COX17Q14061 63 aa12.44□□□□□ -0.42
PTP4A1-201ENST00000370651 AMELXQ99217 191 aa12.44□□□□□ -0.42
PTP4A1-201ENST00000370651 MIFP14174 115 aa12.44□□□□□ -0.42
PTP4A1-201ENST00000370651 FAM19A1Q7Z5A9 133 aa12.44□□□□□ -0.42
PTP4A1-201ENST00000370651 WFDC10AQ9H1F0 79 aa12.43□□□□□ -0.42
PTP4A1-201ENST00000370651 A0A096LNI7 61 aa12.43□□□□□ -0.42
PTP4A1-201ENST00000370651 M0QXV9 152 aa12.42□□□□□ -0.42
PTP4A1-201ENST00000370651 M0R378 163 aa12.42□□□□□ -0.42
PTP4A1-201ENST00000370651 NTM-AS1Q6ZSK4 140 aa12.42□□□□□ -0.42
PTP4A1-201ENST00000370651 A0A087WVE0 104 aa12.42□□□□□ -0.42
PTP4A1-201ENST00000370651 PRORYQ9H606 182 aa12.42□□□□□ -0.42
PTP4A1-201ENST00000370651 PRO3102Q9H379 93 aa12.42□□□□□ -0.42
PTP4A1-201ENST00000370651 COX6A2Q02221 97 aa12.41□□□□□ -0.42
PTP4A1-201ENST00000370651 WFDC10BQ8IUB3 73 aa12.41□□□□□ -0.42
PTP4A1-201ENST00000370651 CDIP1Q9H305 208 aa12.41□□□□□ -0.42
PTP4A1-201ENST00000370651 IGKV2-28A0A075B6P5 120 aa12.4□□□□□ -0.42
PTP4A1-201ENST00000370651 IGKV2D-28P01615 120 aa12.4□□□□□ -0.42
PTP4A1-201ENST00000370651 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.4□□□□□ -0.42
PTP4A1-201ENST00000370651 ZNF73O43830 326 aaPredicted RBP12.4□□□□□ -0.42
PTP4A1-201ENST00000370651 AGRNO00468 2067 aa12.4□□□□□ -0.43
PTP4A1-201ENST00000370651 DEFB131BA0A096LNP1 70 aa12.4□□□□□ -0.43
PTP4A1-201ENST00000370651 MUC7Q8TAX7 377 aa12.39□□□□□ -0.43
PTP4A1-201ENST00000370651 FAM19A5Q7Z5A7 132 aaPredicted RBP12.39□□□□□ -0.43
PTP4A1-201ENST00000370651 TRAV7A0A075B6U4 112 aa12.39□□□□□ -0.43
PTP4A1-201ENST00000370651 CDSNQ15517 529 aa12.39□□□□□ -0.43
PTP4A1-201ENST00000370651 C14orf177Q52M58 125 aa12.39□□□□□ -0.43
PTP4A1-201ENST00000370651 V9GYY9 64 aa12.39□□□□□ -0.43
PTP4A1-201ENST00000370651 SMIM26A0A096LP01 95 aa12.38□□□□□ -0.43
PTP4A1-201ENST00000370651 COL5A1P20908 1838 aaPredicted RBP12.38□□□□□ -0.43
PTP4A1-201ENST00000370651 LELP1Q5T871 98 aa12.38□□□□□ -0.43
PTP4A1-201ENST00000370651 A0A087WYN8 130 aa12.38□□□□□ -0.43
PTP4A1-201ENST00000370651 HRCT1Q6UXD1 115 aa12.37□□□□□ -0.43
PTP4A1-201ENST00000370651 MRPL55Q7Z7F7 128 aaKnown RBP12.37□□□□□ -0.43
PTP4A1-201ENST00000370651 Q8N814 137 aa12.37□□□□□ -0.43
PTP4A1-201ENST00000370651 DHRS4-AS1Q9P1J3 65 aa12.37□□□□□ -0.43
PTP4A1-201ENST00000370651 PIEZO1Q92508 2521 aa12.37□□□□□ -0.43
PTP4A1-201ENST00000370651 ODF3L2Q3SX64 289 aa12.37□□□□□ -0.43
PTP4A1-201ENST00000370651 A0A087WZ39 114 aa12.36□□□□□ -0.43
PTP4A1-201ENST00000370651 DOPEY1Q5JWR5 2465 aa12.36□□□□□ -0.43
PTP4A1-201ENST00000370651 AVPP01185 164 aa12.35□□□□□ -0.43
PTP4A1-201ENST00000370651 CSDC2Q9Y534 153 aaKnown RBP12.35□□□□□ -0.43
PTP4A1-201ENST00000370651 CYSRT1A8MQ03 144 aa12.35□□□□□ -0.43
PTP4A1-201ENST00000370651 WFDC13Q8IUB5 93 aa12.35□□□□□ -0.43
PTP4A1-201ENST00000370651 LINC01006Q8NI28 216 aa12.35□□□□□ -0.43
PTP4A1-201ENST00000370651 PRR4Q16378 134 aa12.34□□□□□ -0.43
PTP4A1-201ENST00000370651 USP9XQ93008 2570 aaPredicted RBP12.34□□□□□ -0.43
PTP4A1-201ENST00000370651 LINC01546A6NGU7 62 aa12.33□□□□□ -0.44
PTP4A1-201ENST00000370651 TLN2Q9Y4G6 2542 aa12.33□□□□□ -0.44
PTP4A1-201ENST00000370651 SERP1Q9Y6X1 66 aa12.33□□□□□ -0.44
PTP4A1-201ENST00000370651 BRI3O95415 125 aa12.32□□□□□ -0.44
PTP4A1-201ENST00000370651 C4orf48Q5BLP8 95 aa12.32□□□□□ -0.44
PTP4A1-201ENST00000370651 UNQ6190/PRO20217Q6UXQ8 127 aa12.32□□□□□ -0.44
PTP4A1-201ENST00000370651 TET2Q6N021 2002 aaPredicted RBP12.32□□□□□ -0.44
PTP4A1-201ENST00000370651 PRRC2AP48634 2157 aaKnown RBP12.32□□□□□ -0.44
PTP4A1-201ENST00000370651 KLK5Q9Y337 293 aaPredicted RBP12.32□□□□□ -0.44
PTP4A1-201ENST00000370651 IGLV4-60A0A075B6I1 120 aa12.32□□□□□ -0.44
PTP4A1-201ENST00000370651 CENPFP49454 3210 aa12.31□□□□□ -0.44
PTP4A1-201ENST00000370651 SEC61GP60059 68 aa12.31□□□□□ -0.44
PTP4A1-201ENST00000370651 KIF25-AS1Q9Y6Z4 181 aa12.31□□□□□ -0.44
PTP4A1-201ENST00000370651 EXPH5Q8NEV8 1989 aa12.3□□□□□ -0.44
PTP4A1-201ENST00000370651 PRR3P79522 188 aaKnown RBP12.3□□□□□ -0.44
PTP4A1-201ENST00000370651 KPRPQ5T749 579 aaPredicted RBP12.3□□□□□ -0.44
PTP4A1-201ENST00000370651 SETD2Q9BYW2 2564 aaPredicted RBP12.3□□□□□ -0.44
PTP4A1-201ENST00000370651 HILS1P60008 231 aa12.3□□□□□ -0.44
PTP4A1-201ENST00000370651 C9orf116Q5BN46 136 aaPredicted RBP12.3□□□□□ -0.44
PTP4A1-201ENST00000370651 Q6ZSN1 163 aa12.29□□□□□ -0.44
PTP4A1-201ENST00000370651 SMCPP49901 116 aaPredicted RBP12.29□□□□□ -0.44
PTP4A1-201ENST00000370651 FAM30AQ9NZY2 134 aa12.29□□□□□ -0.44
PTP4A1-201ENST00000370651 BEAN1Q3B7T3 259 aa12.28□□□□□ -0.44
PTP4A1-201ENST00000370651 TRBV7-7A0A0K0K1E9 115 aa12.28□□□□□ -0.44
PTP4A1-201ENST00000370651 KIR2DL5BQ8NHK3 375 aa12.28□□□□□ -0.44
PTP4A1-201ENST00000370651 CELA1Q9UNI1 258 aa12.28□□□□□ -0.44
PTP4A1-201ENST00000370651 ADAMTS20P59510 1910 aa12.27□□□□□ -0.44
PTP4A1-201ENST00000370651 TRBV10-3A0A0K0K1G6 114 aa12.27□□□□□ -0.44
PTP4A1-201ENST00000370651 C1orf195Q5TG92 126 aa12.27□□□□□ -0.45
PTP4A1-201ENST00000370651 PRO0461Q9UI25 63 aa12.27□□□□□ -0.45
PTP4A1-201ENST00000370651 RPL37AP8A6NKH3 93 aa12.26□□□□□ -0.45
PTP4A1-201ENST00000370651 LINC00846Q9NV44 126 aa12.26□□□□□ -0.45
PTP4A1-201ENST00000370651 Q8N3U1 123 aa12.26□□□□□ -0.45
PTP4A1-201ENST00000370651 A0A0J9YWU9 116 aa12.26□□□□□ -0.45
PTP4A1-201ENST00000370651 ABCA12Q86UK0 2595 aa12.25□□□□□ -0.45
PTP4A1-201ENST00000370651 PPDPFQ9H3Y8 114 aa12.25□□□□□ -0.45
PTP4A1-201ENST00000370651 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms