RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 DNAH11Q96DT5 4516 aa8.99□□□□□ -0.97
SSR4-202ENST00000370085 IGHV3OR16-9A0A0B4J2B5 98 aa8.99□□□□□ -0.97
SSR4-202ENST00000370085 FUSP35637 526 aaKnown RBP eCLIP8.99□□□□□ -0.97
SSR4-202ENST00000370085 CNBPP62633 177 aaKnown RBP8.99□□□□□ -0.97
SSR4-202ENST00000370085 PMCHL1Q16048 86 aa8.99□□□□□ -0.97
SSR4-202ENST00000370085 HIGD2BQ4VC39 106 aa8.99□□□□□ -0.97
SSR4-202ENST00000370085 LINC00242Q5T6M2 205 aa8.99□□□□□ -0.97
SSR4-202ENST00000370085 LINC00173Q6ZV60 143 aa8.99□□□□□ -0.97
SSR4-202ENST00000370085 PKIGQ9Y2B9 76 aa8.99□□□□□ -0.97
SSR4-202ENST00000370085 NDUFA6P56556 154 aa8.98□□□□□ -0.97
SSR4-202ENST00000370085 FAM19A3Q7Z5A8 133 aa8.98□□□□□ -0.97
SSR4-202ENST00000370085 OR10D4PQ8NGN7 298 aa8.98□□□□□ -0.97
SSR4-202ENST00000370085 A0A087WZ39 114 aa8.97□□□□□ -0.97
SSR4-202ENST00000370085 A0A096LNJ9 63 aa8.97□□□□□ -0.97
SSR4-202ENST00000370085 PDZD11Q5EBL8 140 aa8.97□□□□□ -0.97
SSR4-202ENST00000370085 LINC01561Q8N1V8 128 aa8.97□□□□□ -0.97
SSR4-202ENST00000370085 PACRGQ96M98 296 aaPredicted RBP8.97□□□□□ -0.97
SSR4-202ENST00000370085 CST9LQ9H4G1 147 aa8.97□□□□□ -0.97
SSR4-202ENST00000370085 SERF1AO75920 110 aa8.96□□□□□ -0.98
SSR4-202ENST00000370085 CDK2AP2O75956 126 aa8.96□□□□□ -0.98
SSR4-202ENST00000370085 ZC2HC1BQ5TFG8 222 aa8.96□□□□□ -0.98
SSR4-202ENST00000370085 C9orf163Q8N9P6 203 aa8.96□□□□□ -0.98
SSR4-202ENST00000370085 IGHV3-64A0A075B6Q5 118 aa8.95□□□□□ -0.98
SSR4-202ENST00000370085 TINCRA0A1B0GVN0 87 aa8.95□□□□□ -0.98
SSR4-202ENST00000370085 F8WDY8 70 aa8.95□□□□□ -0.98
SSR4-202ENST00000370085 KRTAP10-1P60331 282 aa8.95□□□□□ -0.98
SSR4-202ENST00000370085 SPAG11BQ08648 103 aa8.95□□□□□ -0.98
SSR4-202ENST00000370085 LINC00469Q8N7U9 141 aa8.95□□□□□ -0.98
SSR4-202ENST00000370085 ORAOV1Q8WV07 137 aa8.95□□□□□ -0.98
SSR4-202ENST00000370085 A0A0J9YXV3 536 aa8.94□□□□□ -0.98
SSR4-202ENST00000370085 HIST1H2BKO60814 126 aa8.94□□□□□ -0.98
SSR4-202ENST00000370085 LEPROTL1O95214 131 aa8.94□□□□□ -0.98
SSR4-202ENST00000370085 HIST1H2BJP06899 126 aa8.94□□□□□ -0.98
SSR4-202ENST00000370085 PRSS2P07478 247 aa8.94□□□□□ -0.98
SSR4-202ENST00000370085 HIST1H2BOP23527 126 aa8.94□□□□□ -0.98
SSR4-202ENST00000370085 HIST1H2BBP33778 126 aa8.94□□□□□ -0.98
SSR4-202ENST00000370085 HIST1H2BDP58876 126 aa8.94□□□□□ -0.98
SSR4-202ENST00000370085 HIST1H2BCP62807 126 aa8.94□□□□□ -0.98
SSR4-202ENST00000370085 COX6A2Q02221 97 aa8.94□□□□□ -0.98
SSR4-202ENST00000370085 HIST2H2BEQ16778 126 aa8.94□□□□□ -0.98
SSR4-202ENST00000370085 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.94□□□□□ -0.98
SSR4-202ENST00000370085 FAM19A2Q8N3H0 131 aa8.94□□□□□ -0.98
SSR4-202ENST00000370085 HIST1H2BHQ93079 126 aa8.94□□□□□ -0.98
SSR4-202ENST00000370085 IFI27L1Q96BM0 104 aa8.94□□□□□ -0.98
SSR4-202ENST00000370085 C2orf48Q96LS8 159 aa8.94□□□□□ -0.98
SSR4-202ENST00000370085 CARD19Q96LW7 228 aa8.94□□□□□ -0.98
SSR4-202ENST00000370085 CAMK2N2Q96S95 79 aa8.94□□□□□ -0.98
SSR4-202ENST00000370085 HIST1H2BNQ99877 126 aa8.94□□□□□ -0.98
SSR4-202ENST00000370085 HIST1H2BMQ99879 126 aa8.94□□□□□ -0.98
SSR4-202ENST00000370085 HSPB8Q9UJY1 196 aa8.94□□□□□ -0.98
SSR4-202ENST00000370085 BIRC6Q9NR09 4857 aa8.93□□□□□ -0.98
SSR4-202ENST00000370085 H3BRM9 83 aa8.93□□□□□ -0.98
SSR4-202ENST00000370085 SYCNQ0VAF6 134 aa8.93□□□□□ -0.98
SSR4-202ENST00000370085 IGLV4-69A0A075B6H9 119 aa8.92□□□□□ -0.98
SSR4-202ENST00000370085 TRAV12-1A0A0B4J245 112 aa8.91□□□□□ -0.98
SSR4-202ENST00000370085 NDUFA1O15239 70 aa8.91□□□□□ -0.98
SSR4-202ENST00000370085 LINC01620Q4KN68 170 aa8.91□□□□□ -0.98
SSR4-202ENST00000370085 CHAC1Q9BUX1 264 aa8.91□□□□□ -0.98
SSR4-202ENST00000370085 CDKN2A-AS1Q9UH64 79 aa8.91□□□□□ -0.98
SSR4-202ENST00000370085 DNAH5Q8TE73 4624 aa8.9□□□□□ -0.98
SSR4-202ENST00000370085 SLPIP03973 132 aa8.9□□□□□ -0.98
SSR4-202ENST00000370085 IGLC3P0DOY3 106 aa8.9□□□□□ -0.98
SSR4-202ENST00000370085 LINC00526Q96FQ7 95 aa8.9□□□□□ -0.98
SSR4-202ENST00000370085 CHTOPQ9Y3Y2 248 aaKnown RBP8.9□□□□□ -0.98
SSR4-202ENST00000370085 DYNC1H1Q14204 4646 aaKnown RBP8.89□□□□□ -0.99
SSR4-202ENST00000370085 IGLV5-45A0A087WSX0 123 aa8.89□□□□□ -0.99
SSR4-202ENST00000370085 CKS1BP61024 79 aa8.89□□□□□ -0.99
SSR4-202ENST00000370085 C6orf226Q5I0X4 101 aa8.89□□□□□ -0.99
SSR4-202ENST00000370085 TOMM7Q9P0U1 55 aa8.89□□□□□ -0.99
SSR4-202ENST00000370085 FABP4P15090 132 aa8.88□□□□□ -0.99
SSR4-202ENST00000370085 LINC00310P59036 64 aa8.88□□□□□ -0.99
SSR4-202ENST00000370085 RNF151Q2KHN1 245 aa8.88□□□□□ -0.99
SSR4-202ENST00000370085 SDIM1Q6ZPB5 146 aa8.88□□□□□ -0.99
SSR4-202ENST00000370085 Q6ZSA8 131 aa8.88□□□□□ -0.99
SSR4-202ENST00000370085 Q8IZM0 81 aa8.88□□□□□ -0.99
SSR4-202ENST00000370085 DPH3Q96FX2 82 aa8.88□□□□□ -0.99
SSR4-202ENST00000370085 LINC00474Q9P2X8 69 aa8.88□□□□□ -0.99
SSR4-202ENST00000370085 LRP1BQ9NZR2 4599 aa8.88□□□□□ -0.99
SSR4-202ENST00000370085 CXCL5P42830 114 aa8.87□□□□□ -0.99
SSR4-202ENST00000370085 TMEM170BQ5T4T1 132 aa8.87□□□□□ -0.99
SSR4-202ENST00000370085 Q6ZRU5 148 aa8.87□□□□□ -0.99
SSR4-202ENST00000370085 MAP1LC3CQ9BXW4 147 aa8.87□□□□□ -0.99
SSR4-202ENST00000370085 MRPL35Q9NZE8 188 aaKnown RBP8.87□□□□□ -0.99
SSR4-202ENST00000370085 LOC107984640A0A0U1RRK4 108 aa8.86□□□□□ -0.99
SSR4-202ENST00000370085 F8VRH5 84 aa8.86□□□□□ -0.99
SSR4-202ENST00000370085 H0Y8G0 127 aa8.86□□□□□ -0.99
SSR4-202ENST00000370085 NUPR1O60356 82 aa8.86□□□□□ -0.99
SSR4-202ENST00000370085 TRBV30A0A0K0K1B3 111 aa8.85□□□□□ -0.99
SSR4-202ENST00000370085 SMIM1B2RUZ4 78 aa8.85□□□□□ -0.99
SSR4-202ENST00000370085 SPINK8P0C7L1 97 aa8.85□□□□□ -0.99
SSR4-202ENST00000370085 KIAA0087Q14695 138 aa8.85□□□□□ -0.99
SSR4-202ENST00000370085 COA6Q5JTJ3 125 aaKnown RBP8.85□□□□□ -0.99
SSR4-202ENST00000370085 COX7B2Q8TF08 81 aa8.85□□□□□ -0.99
SSR4-202ENST00000370085 FAM30AQ9NZY2 134 aa8.85□□□□□ -0.99
SSR4-202ENST00000370085 ZNF22P17026 224 aaPredicted RBP8.84□□□□□ -0.99
SSR4-202ENST00000370085 PLNP26678 52 aa8.84□□□□□ -0.99
SSR4-202ENST00000370085 XGP55808 180 aa8.84□□□□□ -0.99
SSR4-202ENST00000370085 C11orf86A6NJI1 115 aa8.83□□□□□ -1
SSR4-202ENST00000370085 UNQ6190/PRO20217Q6UXQ8 127 aa8.83□□□□□ -1
SSR4-202ENST00000370085 IGKV2-24A0A0C4DH68 120 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms