RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 CRIP1P50238 77 aa9.27□□□□□ -0.93
HCFC1-202ENST00000369984 RBX1P62877 108 aa9.27□□□□□ -0.93
HCFC1-202ENST00000369984 DEFB114Q30KQ6 69 aa9.27□□□□□ -0.93
HCFC1-202ENST00000369984 PROK1P58294 105 aa9.27□□□□□ -0.93
HCFC1-202ENST00000369984 ODF3BA8MYP8 253 aa9.27□□□□□ -0.93
HCFC1-202ENST00000369984 A8MZ25 164 aa9.26□□□□□ -0.93
HCFC1-202ENST00000369984 PPDPFQ9H3Y8 114 aa9.26□□□□□ -0.93
HCFC1-202ENST00000369984 K7EQG2 157 aa9.26□□□□□ -0.93
HCFC1-202ENST00000369984 SMIM11BQ8TCY0 68 aa9.26□□□□□ -0.93
HCFC1-202ENST00000369984 FLG2Q5D862 2391 aaPredicted RBP9.26□□□□□ -0.93
HCFC1-202ENST00000369984 IGLV9-49A0A0B4J1Y8 123 aa9.26□□□□□ -0.93
HCFC1-202ENST00000369984 TNFRSF13BO14836 293 aaPredicted RBP9.26□□□□□ -0.93
HCFC1-202ENST00000369984 COX17Q14061 63 aa9.25□□□□□ -0.93
HCFC1-202ENST00000369984 LY6LH3BQJ8 138 aa9.25□□□□□ -0.93
HCFC1-202ENST00000369984 SHISA2Q6UWI4 295 aa9.24□□□□□ -0.93
HCFC1-202ENST00000369984 SYCNQ0VAF6 134 aa9.24□□□□□ -0.93
HCFC1-202ENST00000369984 Q8N976 141 aa9.24□□□□□ -0.93
HCFC1-202ENST00000369984 RPL37AP8A6NKH3 93 aa9.24□□□□□ -0.93
HCFC1-202ENST00000369984 Q6YL49 198 aa9.24□□□□□ -0.93
HCFC1-202ENST00000369984 TRAV7A0A075B6U4 112 aa9.24□□□□□ -0.93
HCFC1-202ENST00000369984 CRYGAP11844 174 aa9.24□□□□□ -0.93
HCFC1-202ENST00000369984 XGP55808 180 aa9.24□□□□□ -0.93
HCFC1-202ENST00000369984 LOC107984640A0A0U1RRK4 108 aa9.23□□□□□ -0.93
HCFC1-202ENST00000369984 ESRGQ1W209 222 aa9.23□□□□□ -0.93
HCFC1-202ENST00000369984 TRBV6-4A0A1B0GX49 114 aa9.23□□□□□ -0.93
HCFC1-202ENST00000369984 LINC00574Q9H8X3 128 aa9.23□□□□□ -0.93
HCFC1-202ENST00000369984 LST1O00453 97 aa9.23□□□□□ -0.93
HCFC1-202ENST00000369984 NRACQ8N912 160 aa9.23□□□□□ -0.93
HCFC1-202ENST00000369984 MSMPQ1L6U9 139 aa9.23□□□□□ -0.93
HCFC1-202ENST00000369984 Q6ZQY7 126 aa9.23□□□□□ -0.93
HCFC1-202ENST00000369984 C2orf91Q6ZV80 131 aa9.23□□□□□ -0.93
HCFC1-202ENST00000369984 M0R378 163 aa9.22□□□□□ -0.93
HCFC1-202ENST00000369984 MBD6Q96DN6 1003 aa9.22□□□□□ -0.93
HCFC1-202ENST00000369984 LINC00208Q96KT6 92 aa9.22□□□□□ -0.93
HCFC1-202ENST00000369984 CD164L2Q6UWJ8 174 aa9.22□□□□□ -0.93
HCFC1-202ENST00000369984 NOTCH2Q04721 2471 aa9.22□□□□□ -0.93
HCFC1-202ENST00000369984 PYGO1Q9Y3Y4 419 aa9.22□□□□□ -0.93
HCFC1-202ENST00000369984 SPINK1P00995 79 aa9.22□□□□□ -0.93
HCFC1-202ENST00000369984 TSHBP01222 138 aa9.22□□□□□ -0.93
HCFC1-202ENST00000369984 LY6G6CO95867 125 aa9.21□□□□□ -0.93
HCFC1-202ENST00000369984 LINC00526Q96FQ7 95 aa9.21□□□□□ -0.94
HCFC1-202ENST00000369984 RETNLBQ9BQ08 111 aa9.21□□□□□ -0.94
HCFC1-202ENST00000369984 FBXL19-AS1Q494R0 122 aa9.21□□□□□ -0.94
HCFC1-202ENST00000369984 SPAG11AQ6PDA7 123 aa9.21□□□□□ -0.94
HCFC1-202ENST00000369984 COL27A1Q8IZC6 1860 aaPredicted RBP9.2□□□□□ -0.94
HCFC1-202ENST00000369984 BBC3Q96PG8 261 aaPredicted RBP9.2□□□□□ -0.94
HCFC1-202ENST00000369984 LINC00482Q8N8I6 264 aa9.2□□□□□ -0.94
HCFC1-202ENST00000369984 BRWD1-AS2P59051 145 aa9.19□□□□□ -0.94
HCFC1-202ENST00000369984 ZNF295-AS1Q8N0V1 137 aa9.19□□□□□ -0.94
HCFC1-202ENST00000369984 EIF4EBP1Q13541 118 aaPredicted RBP9.19□□□□□ -0.94
HCFC1-202ENST00000369984 PIEZO2Q9H5I5 2752 aa9.19□□□□□ -0.94
HCFC1-202ENST00000369984 LMO4P61968 165 aa9.19□□□□□ -0.94
HCFC1-202ENST00000369984 SPINT4Q6UDR6 99 aa9.19□□□□□ -0.94
HCFC1-202ENST00000369984 IGLV4-69A0A075B6H9 119 aa9.18□□□□□ -0.94
HCFC1-202ENST00000369984 C1orf229Q6ZS94 237 aaPredicted RBP9.18□□□□□ -0.94
HCFC1-202ENST00000369984 IGLV2-18A0A075B6J9 118 aa9.18□□□□□ -0.94
HCFC1-202ENST00000369984 CIRBP-AS1Q8TBR5 109 aa9.18□□□□□ -0.94
HCFC1-202ENST00000369984 IGLV2-11P01706 119 aa9.18□□□□□ -0.94
HCFC1-202ENST00000369984 KPRPQ5T749 579 aaPredicted RBP9.17□□□□□ -0.94
HCFC1-202ENST00000369984 Q6ZS46 218 aa9.17□□□□□ -0.94
HCFC1-202ENST00000369984 PLAC8L1A1L4L8 177 aa9.17□□□□□ -0.94
HCFC1-202ENST00000369984 YPEL4Q96NS1 127 aa9.17□□□□□ -0.94
HCFC1-202ENST00000369984 LOC100131303A0A0U1RQF7 123 aa9.17□□□□□ -0.94
HCFC1-202ENST00000369984 PCOTHQ58A44 107 aa9.17□□□□□ -0.94
HCFC1-202ENST00000369984 Q8NA96 180 aa9.17□□□□□ -0.94
HCFC1-202ENST00000369984 ZNF73O43830 326 aaPredicted RBP9.17□□□□□ -0.94
HCFC1-202ENST00000369984 Q6ZPA2 131 aa9.17□□□□□ -0.94
HCFC1-202ENST00000369984 RPL28P46779 137 aaKnown RBP9.16□□□□□ -0.94
HCFC1-202ENST00000369984 RNASE3P12724 160 aaKnown RBP9.16□□□□□ -0.94
HCFC1-202ENST00000369984 M0R2N4 97 aa9.16□□□□□ -0.94
HCFC1-202ENST00000369984 TRBV7-7A0A0K0K1E9 115 aa9.16□□□□□ -0.94
HCFC1-202ENST00000369984 TRAV10A0A0B4J240 114 aa9.16□□□□□ -0.94
HCFC1-202ENST00000369984 LINC00959A0A1B0GUT2 108 aa9.16□□□□□ -0.94
HCFC1-202ENST00000369984 A0A1W2PNU3 283 aaPredicted RBP9.16□□□□□ -0.94
HCFC1-202ENST00000369984 NUPR2A6NF83 97 aa9.15□□□□□ -0.94
HCFC1-202ENST00000369984 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.15□□□□□ -0.94
HCFC1-202ENST00000369984 LELP1Q5T871 98 aa9.15□□□□□ -0.94
HCFC1-202ENST00000369984 LINC01547P58512 204 aaPredicted RBP9.15□□□□□ -0.94
HCFC1-202ENST00000369984 INAFM1C9JVW0 142 aa9.15□□□□□ -0.95
HCFC1-202ENST00000369984 ZNF843Q8N446 348 aa9.14□□□□□ -0.95
HCFC1-202ENST00000369984 Q6JHZ5 121 aa9.14□□□□□ -0.95
HCFC1-202ENST00000369984 WISP2O76076 250 aa9.14□□□□□ -0.95
HCFC1-202ENST00000369984 TLN2Q9Y4G6 2542 aa9.13□□□□□ -0.95
HCFC1-202ENST00000369984 MUC7Q8TAX7 377 aa9.13□□□□□ -0.95
HCFC1-202ENST00000369984 PRO0628Q9UI54 55 aa9.13□□□□□ -0.95
HCFC1-202ENST00000369984 PRM2P04554 102 aa9.12□□□□□ -0.95
HCFC1-202ENST00000369984 C10orf99Q6UWK7 81 aa9.12□□□□□ -0.95
HCFC1-202ENST00000369984 Q8IZM0 81 aa9.12□□□□□ -0.95
HCFC1-202ENST00000369984 MUC22E2RYF6 1773 aaPredicted RBP9.12□□□□□ -0.95
HCFC1-202ENST00000369984 H0Y9P7 68 aa9.11□□□□□ -0.95
HCFC1-202ENST00000369984 Q8N814 137 aa9.11□□□□□ -0.95
HCFC1-202ENST00000369984 FN1P02751 2386 aaKnown RBP9.11□□□□□ -0.95
HCFC1-202ENST00000369984 A0A087WVE0 104 aa9.11□□□□□ -0.95
HCFC1-202ENST00000369984 PRR9Q5T870 116 aa9.11□□□□□ -0.95
HCFC1-202ENST00000369984 IGHV6-1A0A0B4J1U7 121 aa9.1□□□□□ -0.95
HCFC1-202ENST00000369984 C19orf84I3L1E1 186 aa9.1□□□□□ -0.95
HCFC1-202ENST00000369984 FSTL3O95633 263 aa9.1□□□□□ -0.95
HCFC1-202ENST00000369984 NTM-AS1Q6ZSK4 140 aa9.1□□□□□ -0.95
HCFC1-202ENST00000369984 KLLNB2CW77 178 aa9.09□□□□□ -0.95
HCFC1-202ENST00000369984 CRIP2P52943 208 aaPredicted RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms