RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 IGLV4-69A0A075B6H9 119 aa12.97□□□□□ -0.33
SMNDC1-201ENST00000369592 A0A096LNI7 61 aa12.97□□□□□ -0.33
SMNDC1-201ENST00000369592 ZNF561-AS1K7EIQ3 104 aa12.97□□□□□ -0.33
SMNDC1-201ENST00000369592 K7EMI3 77 aa12.97□□□□□ -0.33
SMNDC1-201ENST00000369592 RPL37AP61513 92 aaKnown RBP12.97□□□□□ -0.33
SMNDC1-201ENST00000369592 SYCNQ0VAF6 134 aa12.97□□□□□ -0.33
SMNDC1-201ENST00000369592 KRTAP29-1A8MX34 341 aaPredicted RBP12.96□□□□□ -0.33
SMNDC1-201ENST00000369592 FAT3Q8TDW7 4589 aa12.95□□□□□ -0.34
SMNDC1-201ENST00000369592 MALP21145 153 aa12.95□□□□□ -0.34
SMNDC1-201ENST00000369592 IFI27P40305 119 aaPredicted RBP12.95□□□□□ -0.34
SMNDC1-201ENST00000369592 C2orf48Q96LS8 159 aa12.95□□□□□ -0.34
SMNDC1-201ENST00000369592 IFITM10A6NMD0 228 aa12.94□□□□□ -0.34
SMNDC1-201ENST00000369592 HNRNPA3P51991 378 aaKnown RBP12.94□□□□□ -0.34
SMNDC1-201ENST00000369592 C2orf66Q6UXQ4 117 aa12.94□□□□□ -0.34
SMNDC1-201ENST00000369592 Q6ZRU5 148 aa12.94□□□□□ -0.34
SMNDC1-201ENST00000369592 GNB1LQ9BYB4 327 aa12.94□□□□□ -0.34
SMNDC1-201ENST00000369592 NXT2Q9NPJ8 142 aaKnown RBP12.94□□□□□ -0.34
SMNDC1-201ENST00000369592 IGIPA6NJ69 53 aa12.93□□□□□ -0.34
SMNDC1-201ENST00000369592 NPSP0C0P6 89 aa12.93□□□□□ -0.34
SMNDC1-201ENST00000369592 KIAA1644Q3SXP7 199 aa12.93□□□□□ -0.34
SMNDC1-201ENST00000369592 ORMDL2Q53FV1 153 aa12.93□□□□□ -0.34
SMNDC1-201ENST00000369592 LINC00242Q5T6M2 205 aa12.93□□□□□ -0.34
SMNDC1-201ENST00000369592 LINC00173Q6ZV60 143 aa12.93□□□□□ -0.34
SMNDC1-201ENST00000369592 TMEM141Q96I45 108 aa12.93□□□□□ -0.34
SMNDC1-201ENST00000369592 AMELXQ99217 191 aa12.93□□□□□ -0.34
SMNDC1-201ENST00000369592 CYSLTR1Q9Y271 337 aa12.93□□□□□ -0.34
SMNDC1-201ENST00000369592 IGKV2-24A0A0C4DH68 120 aa12.92□□□□□ -0.34
SMNDC1-201ENST00000369592 APOMO95445 188 aa12.92□□□□□ -0.34
SMNDC1-201ENST00000369592 MAJINQ3KP22 176 aa12.92□□□□□ -0.34
SMNDC1-201ENST00000369592 OR10D4PQ8NGN7 298 aa12.92□□□□□ -0.34
SMNDC1-201ENST00000369592 PKIGQ9Y2B9 76 aa12.92□□□□□ -0.34
SMNDC1-201ENST00000369592 RHEBQ15382 184 aa12.91□□□□□ -0.34
SMNDC1-201ENST00000369592 DPH3Q96FX2 82 aa12.91□□□□□ -0.34
SMNDC1-201ENST00000369592 A0A087WZ39 114 aa12.9□□□□□ -0.34
SMNDC1-201ENST00000369592 LINC01546A6NGU7 62 aa12.9□□□□□ -0.34
SMNDC1-201ENST00000369592 S100PP25815 95 aa12.9□□□□□ -0.34
SMNDC1-201ENST00000369592 UBE2D1P51668 147 aa12.9□□□□□ -0.34
SMNDC1-201ENST00000369592 SPAG11BQ08648 103 aa12.9□□□□□ -0.34
SMNDC1-201ENST00000369592 LINC00474Q9P2X8 69 aa12.9□□□□□ -0.34
SMNDC1-201ENST00000369592 RNF151Q2KHN1 245 aa12.89□□□□□ -0.35
SMNDC1-201ENST00000369592 FAM19A3Q7Z5A8 133 aa12.89□□□□□ -0.35
SMNDC1-201ENST00000369592 STPG4Q8N801 248 aa12.89□□□□□ -0.35
SMNDC1-201ENST00000369592 CAMK2N2Q96S95 79 aa12.89□□□□□ -0.35
SMNDC1-201ENST00000369592 ALKBH7Q9BT30 221 aaPredicted RBP12.89□□□□□ -0.35
SMNDC1-201ENST00000369592 F8WDY8 70 aa12.88□□□□□ -0.35
SMNDC1-201ENST00000369592 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.88□□□□□ -0.35
SMNDC1-201ENST00000369592 PTTG1IPP53801 180 aa12.88□□□□□ -0.35
SMNDC1-201ENST00000369592 KIAA0087Q14695 138 aa12.88□□□□□ -0.35
SMNDC1-201ENST00000369592 COX19Q49B96 90 aa12.88□□□□□ -0.35
SMNDC1-201ENST00000369592 ZC2HC1BQ5TFG8 222 aa12.88□□□□□ -0.35
SMNDC1-201ENST00000369592 LOC107984640A0A0U1RRK4 108 aa12.87□□□□□ -0.35
SMNDC1-201ENST00000369592 TEX43Q6ZNM6 134 aa12.87□□□□□ -0.35
SMNDC1-201ENST00000369592 ORAOV1Q8WV07 137 aa12.87□□□□□ -0.35
SMNDC1-201ENST00000369592 LINC01561Q8N1V8 128 aa12.86□□□□□ -0.35
SMNDC1-201ENST00000369592 TOMM6Q96B49 74 aa12.86□□□□□ -0.35
SMNDC1-201ENST00000369592 RPS10P5Q9NQ39 176 aa12.86□□□□□ -0.35
SMNDC1-201ENST00000369592 MRPL35Q9NZE8 188 aaKnown RBP12.86□□□□□ -0.35
SMNDC1-201ENST00000369592 TGIF2-C20orf24A0A0A6YYL0 155 aa12.85□□□□□ -0.35
SMNDC1-201ENST00000369592 OXTP01178 125 aa12.85□□□□□ -0.35
SMNDC1-201ENST00000369592 MT-ND6P03923 174 aa12.85□□□□□ -0.35
SMNDC1-201ENST00000369592 SERTAD4-AS1Q5TG53 156 aa12.85□□□□□ -0.35
SMNDC1-201ENST00000369592 TIMM17AQ99595 171 aa12.85□□□□□ -0.35
SMNDC1-201ENST00000369592 G0S2P27469 103 aa12.84□□□□□ -0.35
SMNDC1-201ENST00000369592 C10orf25Q5T742 122 aa12.84□□□□□ -0.35
SMNDC1-201ENST00000369592 VCX2Q9H322 139 aa12.84□□□□□ -0.35
SMNDC1-201ENST00000369592 C2orf88Q9BSF0 95 aa12.83□□□□□ -0.36
SMNDC1-201ENST00000369592 MRPL18Q9H0U6 180 aaKnown RBP12.83□□□□□ -0.36
SMNDC1-201ENST00000369592 Q6ZN92 141 aa12.82□□□□□ -0.36
SMNDC1-201ENST00000369592 C7orf33Q8WU49 177 aa12.82□□□□□ -0.36
SMNDC1-201ENST00000369592 A0A0J9YXV3 536 aa12.81□□□□□ -0.36
SMNDC1-201ENST00000369592 A0A1W2PNN7 141 aa12.81□□□□□ -0.36
SMNDC1-201ENST00000369592 TLX1NBP0CAT3 122 aa12.81□□□□□ -0.36
SMNDC1-201ENST00000369592 GAGE2BQ13066 116 aa12.81□□□□□ -0.36
SMNDC1-201ENST00000369592 UNQ6190/PRO20217Q6UXQ8 127 aa12.81□□□□□ -0.36
SMNDC1-201ENST00000369592 ERASQ7Z444 233 aa12.81□□□□□ -0.36
SMNDC1-201ENST00000369592 NDUFA1O15239 70 aa12.8□□□□□ -0.36
SMNDC1-201ENST00000369592 C6orf48Q9UBA6 75 aa12.8□□□□□ -0.36
SMNDC1-201ENST00000369592 PRR3P79522 188 aaKnown RBP12.79□□□□□ -0.36
SMNDC1-201ENST00000369592 FABP9Q0Z7S8 132 aa12.79□□□□□ -0.36
SMNDC1-201ENST00000369592 PAPPA-AS1Q5QFB9 102 aa12.79□□□□□ -0.36
SMNDC1-201ENST00000369592 PLA2G2DQ9UNK4 145 aa12.79□□□□□ -0.36
SMNDC1-201ENST00000369592 APOC3P02656 99 aa12.78□□□□□ -0.36
SMNDC1-201ENST00000369592 LINC01549A6NIU2 74 aa12.77□□□□□ -0.37
SMNDC1-201ENST00000369592 YPEL4Q96NS1 127 aa12.77□□□□□ -0.37
SMNDC1-201ENST00000369592 SVBPQ8N300 66 aa12.76□□□□□ -0.37
SMNDC1-201ENST00000369592 URB1-AS1Q96HZ7 61 aa12.76□□□□□ -0.37
SMNDC1-201ENST00000369592 SCGB3A1Q96QR1 104 aa12.76□□□□□ -0.37
SMNDC1-201ENST00000369592 SNAPINO95295 136 aa12.75□□□□□ -0.37
SMNDC1-201ENST00000369592 HERVK_113P63121 156 aa12.75□□□□□ -0.37
SMNDC1-201ENST00000369592 RPL18AQ02543 176 aaKnown RBP12.75□□□□□ -0.37
SMNDC1-201ENST00000369592 C9orf116Q5BN46 136 aaPredicted RBP12.75□□□□□ -0.37
SMNDC1-201ENST00000369592 Q6ZRP5 223 aa12.75□□□□□ -0.37
SMNDC1-201ENST00000369592 CDKN2A-AS1Q9UH64 79 aa12.75□□□□□ -0.37
SMNDC1-201ENST00000369592 A0A096LNJ9 63 aa12.74□□□□□ -0.37
SMNDC1-201ENST00000369592 TRBV30A0A0K0K1B3 111 aa12.74□□□□□ -0.37
SMNDC1-201ENST00000369592 SEC11AP67812 179 aa12.74□□□□□ -0.37
SMNDC1-201ENST00000369592 C2orf82Q6UX34 121 aa12.74□□□□□ -0.37
SMNDC1-201ENST00000369592 IGLV5-45A0A087WSX0 123 aa12.73□□□□□ -0.37
SMNDC1-201ENST00000369592 MT1HL1P0DM35 61 aa12.73□□□□□ -0.37
SMNDC1-201ENST00000369592 C18orf32Q8TCD1 76 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms