RNA–Protein interactions for RNA: ENST00000368912.7

SEMA6C-202, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 3,697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-202ENST00000368912 LEPROTO15243 131 aa11.33□□□□□ -0.6
SEMA6C-202ENST00000368912 DAND5Q8N907 189 aa11.33□□□□□ -0.6
SEMA6C-202ENST00000368912 ZNF702PQ9H963 129 aa11.33□□□□□ -0.6
SEMA6C-202ENST00000368912 DCANP1Q8TF63 244 aa11.32□□□□□ -0.6
SEMA6C-202ENST00000368912 LINC00474Q9P2X8 69 aa11.32□□□□□ -0.6
SEMA6C-202ENST00000368912 NOTCH1P46531 2555 aa11.32□□□□□ -0.6
SEMA6C-202ENST00000368912 USMG5Q96IX5 58 aa11.32□□□□□ -0.6
SEMA6C-202ENST00000368912 OPRPNQ99935 248 aaPredicted RBP11.32□□□□□ -0.6
SEMA6C-202ENST00000368912 NBEAL2Q6ZNJ1 2754 aa11.32□□□□□ -0.6
SEMA6C-202ENST00000368912 ZNF625Q96I27 306 aaPredicted RBP11.32□□□□□ -0.6
SEMA6C-202ENST00000368912 CNFNQ9BYD5 112 aa11.32□□□□□ -0.6
SEMA6C-202ENST00000368912 PHLDA3Q9Y5J5 127 aa11.32□□□□□ -0.6
SEMA6C-202ENST00000368912 IGKV3D-20A0A0C4DH25 116 aa11.31□□□□□ -0.6
SEMA6C-202ENST00000368912 TIMM17BO60830 172 aa11.31□□□□□ -0.6
SEMA6C-202ENST00000368912 LINC01600Q96MT4 127 aa11.31□□□□□ -0.6
SEMA6C-202ENST00000368912 ZNF580Q9UK33 172 aa11.31□□□□□ -0.6
SEMA6C-202ENST00000368912 PF4P02776 101 aa11.3□□□□□ -0.6
SEMA6C-202ENST00000368912 IGF1P05019 195 aa11.3□□□□□ -0.6
SEMA6C-202ENST00000368912 PMAIP1Q13794 54 aa11.3□□□□□ -0.6
SEMA6C-202ENST00000368912 BUB3O43684 328 aa11.3□□□□□ -0.6
SEMA6C-202ENST00000368912 WFDC9Q8NEX5 89 aa11.3□□□□□ -0.6
SEMA6C-202ENST00000368912 Q9HAA7 133 aa11.3□□□□□ -0.6
SEMA6C-202ENST00000368912 U3KQE9 123 aa11.3□□□□□ -0.6
SEMA6C-202ENST00000368912 C6orf226Q5I0X4 101 aa11.29□□□□□ -0.6
SEMA6C-202ENST00000368912 C14orf132Q9NPU4 83 aa11.29□□□□□ -0.6
SEMA6C-202ENST00000368912 NDUFC2-KCTD14E9PQ53 114 aa11.29□□□□□ -0.6
SEMA6C-202ENST00000368912 PDE6HQ13956 83 aa11.29□□□□□ -0.6
SEMA6C-202ENST00000368912 HILS1P60008 231 aa11.29□□□□□ -0.6
SEMA6C-202ENST00000368912 AMELXQ99217 191 aa11.29□□□□□ -0.6
SEMA6C-202ENST00000368912 XCL1P47992 114 aa11.28□□□□□ -0.6
SEMA6C-202ENST00000368912 XCL2Q9UBD3 114 aa11.28□□□□□ -0.6
SEMA6C-202ENST00000368912 ADAMTSL4-AS1Q5T5F5 129 aa11.28□□□□□ -0.6
SEMA6C-202ENST00000368912 A0A0J9YXV3 536 aa11.28□□□□□ -0.6
SEMA6C-202ENST00000368912 C11orf21Q9P2W6 132 aa11.28□□□□□ -0.6
SEMA6C-202ENST00000368912 NDUFA12Q9UI09 145 aa11.28□□□□□ -0.6
SEMA6C-202ENST00000368912 RNASE4P34096 147 aaKnown RBP11.27□□□□□ -0.6
SEMA6C-202ENST00000368912 SOSTDC1Q6X4U4 206 aa11.27□□□□□ -0.61
SEMA6C-202ENST00000368912 COPS9Q8WXC6 57 aa11.27□□□□□ -0.61
SEMA6C-202ENST00000368912 SNURFQ9Y675 71 aa11.27□□□□□ -0.61
SEMA6C-202ENST00000368912 SMAD5-AS1Q9Y6J3 95 aa11.27□□□□□ -0.61
SEMA6C-202ENST00000368912 TSHBP01222 138 aa11.27□□□□□ -0.61
SEMA6C-202ENST00000368912 ZFAND3Q9H8U3 227 aa11.27□□□□□ -0.61
SEMA6C-202ENST00000368912 NBEAL1Q6ZS30 2694 aa11.26□□□□□ -0.61
SEMA6C-202ENST00000368912 LINC01006Q8NI28 216 aa11.26□□□□□ -0.61
SEMA6C-202ENST00000368912 PSMB8P28062 276 aa11.26□□□□□ -0.61
SEMA6C-202ENST00000368912 TMEM61Q8N0U2 210 aa11.25□□□□□ -0.61
SEMA6C-202ENST00000368912 TMEM141Q96I45 108 aa11.25□□□□□ -0.61
SEMA6C-202ENST00000368912 APRG1Q8IVJ8 170 aa11.25□□□□□ -0.61
SEMA6C-202ENST00000368912 NDUFA4O00483 81 aa11.24□□□□□ -0.61
SEMA6C-202ENST00000368912 FP248Q71RG6 208 aaPredicted RBP11.24□□□□□ -0.61
SEMA6C-202ENST00000368912 CLPSL1A2RUU4 121 aa11.24□□□□□ -0.61
SEMA6C-202ENST00000368912 DEFB131AP59861 70 aa11.24□□□□□ -0.61
SEMA6C-202ENST00000368912 IGHV7-4-1A0A0J9YVY3 117 aa11.24□□□□□ -0.61
SEMA6C-202ENST00000368912 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.24□□□□□ -0.61
SEMA6C-202ENST00000368912 TMEM89A2RUT3 159 aa11.23□□□□□ -0.61
SEMA6C-202ENST00000368912 IGHV3-30-3P0DP02 117 aa11.23□□□□□ -0.61
SEMA6C-202ENST00000368912 SNRPD3P62318 126 aaKnown RBP11.23□□□□□ -0.61
SEMA6C-202ENST00000368912 LINC00846Q9NV44 126 aa11.23□□□□□ -0.61
SEMA6C-202ENST00000368912 KRTAP1-1Q07627 177 aa11.23□□□□□ -0.61
SEMA6C-202ENST00000368912 Q6JHZ5 121 aa11.23□□□□□ -0.61
SEMA6C-202ENST00000368912 COX7A2LO14548 114 aa11.23□□□□□ -0.61
SEMA6C-202ENST00000368912 ZNF876PQ49A33 203 aa11.23□□□□□ -0.61
SEMA6C-202ENST00000368912 CCL24O00175 119 aa11.22□□□□□ -0.61
SEMA6C-202ENST00000368912 SDHAF1A6NFY7 115 aa11.22□□□□□ -0.61
SEMA6C-202ENST00000368912 CYSRT1A8MQ03 144 aa11.22□□□□□ -0.61
SEMA6C-202ENST00000368912 IGLV1-40P01703 118 aa11.22□□□□□ -0.61
SEMA6C-202ENST00000368912 SPINK13Q1W4C9 94 aa11.22□□□□□ -0.61
SEMA6C-202ENST00000368912 IGIPA6NJ69 53 aa11.21□□□□□ -0.61
SEMA6C-202ENST00000368912 FAM74A4Q5TZK3 123 aa11.21□□□□□ -0.61
SEMA6C-202ENST00000368912 A8MZ25 164 aa11.21□□□□□ -0.61
SEMA6C-202ENST00000368912 UBE2E2Q96LR5 201 aa11.21□□□□□ -0.61
SEMA6C-202ENST00000368912 TENM1Q9UKZ4 2725 aa11.21□□□□□ -0.62
SEMA6C-202ENST00000368912 PPP1R17O96001 155 aa11.21□□□□□ -0.62
SEMA6C-202ENST00000368912 PRM2P04554 102 aa11.21□□□□□ -0.62
SEMA6C-202ENST00000368912 MIAQ16674 131 aa11.21□□□□□ -0.62
SEMA6C-202ENST00000368912 TRBV7-6A0A0J9YX20 115 aa11.2□□□□□ -0.62
SEMA6C-202ENST00000368912 F8WEM9 126 aa11.2□□□□□ -0.62
SEMA6C-202ENST00000368912 ZNF575Q86XF7 245 aa11.2□□□□□ -0.62
SEMA6C-202ENST00000368912 VCYO14598 125 aa11.2□□□□□ -0.62
SEMA6C-202ENST00000368912 KLK9Q9UKQ9 250 aa11.19□□□□□ -0.62
SEMA6C-202ENST00000368912 C16orf95Q9H693 158 aa11.19□□□□□ -0.62
SEMA6C-202ENST00000368912 A0A087WWL8 130 aa11.18□□□□□ -0.62
SEMA6C-202ENST00000368912 RNASE13Q5GAN3 156 aaKnown RBP11.18□□□□□ -0.62
SEMA6C-202ENST00000368912 ENHOQ6UWT2 76 aa11.18□□□□□ -0.62
SEMA6C-202ENST00000368912 TIMM17AQ99595 171 aa11.18□□□□□ -0.62
SEMA6C-202ENST00000368912 FSHBP01225 129 aa11.17□□□□□ -0.62
SEMA6C-202ENST00000368912 FAM19A1Q7Z5A9 133 aa11.17□□□□□ -0.62
SEMA6C-202ENST00000368912 RMI2Q96E14 147 aa11.17□□□□□ -0.62
SEMA6C-202ENST00000368912 UBE2D4Q9Y2X8 147 aa11.17□□□□□ -0.62
SEMA6C-202ENST00000368912 RPL28P46779 137 aaKnown RBP11.17□□□□□ -0.62
SEMA6C-202ENST00000368912 WFDC10AQ9H1F0 79 aa11.17□□□□□ -0.62
SEMA6C-202ENST00000368912 MRPL55Q7Z7F7 128 aaKnown RBP11.16□□□□□ -0.62
SEMA6C-202ENST00000368912 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.16□□□□□ -0.62
SEMA6C-202ENST00000368912 TRAV21A0A0B4J279 112 aa11.16□□□□□ -0.62
SEMA6C-202ENST00000368912 SOCS3O14543 225 aa11.16□□□□□ -0.62
SEMA6C-202ENST00000368912 CCKP06307 115 aa11.16□□□□□ -0.62
SEMA6C-202ENST00000368912 COX8CQ7Z4L0 72 aa11.15□□□□□ -0.62
SEMA6C-202ENST00000368912 H7BZZ5 65 aa11.15□□□□□ -0.62
SEMA6C-202ENST00000368912 H3BUA1 57 aa11.15□□□□□ -0.62
SEMA6C-202ENST00000368912 VWFP04275 2813 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms