RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 IGLV5-45A0A087WSX0 123 aa6.05□□□□□ -1.44
SNX27-201ENST00000368838 DEFB131BA0A096LNP1 70 aa6.05□□□□□ -1.44
SNX27-201ENST00000368838 GAGE10A6NGK3 116 aa6.05□□□□□ -1.44
SNX27-201ENST00000368838 IGLC3P0DOY3 106 aa6.05□□□□□ -1.44
SNX27-201ENST00000368838 CDC42SE2Q9NRR3 84 aa6.05□□□□□ -1.44
SNX27-201ENST00000368838 MRPL35Q9NZE8 188 aaKnown RBP6.05□□□□□ -1.44
SNX27-201ENST00000368838 ICOSQ9Y6W8 199 aa6.05□□□□□ -1.44
SNX27-201ENST00000368838 RYR1P21817 5038 aa6.05□□□□□ -1.44
SNX27-201ENST00000368838 IGLV4-69A0A075B6H9 119 aa6.04□□□□□ -1.44
SNX27-201ENST00000368838 C11orf86A6NJI1 115 aa6.04□□□□□ -1.44
SNX27-201ENST00000368838 FGF6P10767 208 aa6.04□□□□□ -1.44
SNX27-201ENST00000368838 TCTAP57738 103 aa6.04□□□□□ -1.44
SNX27-201ENST00000368838 LELP1Q5T871 98 aa6.04□□□□□ -1.44
SNX27-201ENST00000368838 PMCHL2Q9BQD1 86 aa6.04□□□□□ -1.44
SNX27-201ENST00000368838 MIEN1Q9BRT3 115 aa6.04□□□□□ -1.44
SNX27-201ENST00000368838 DNAH11Q96DT5 4516 aa6.04□□□□□ -1.44
SNX27-201ENST00000368838 A0A096LPF7 62 aa6.03□□□□□ -1.44
SNX27-201ENST00000368838 LOC100131303A0A0U1RQF7 123 aa6.03□□□□□ -1.44
SNX27-201ENST00000368838 F5H768 121 aa6.03□□□□□ -1.44
SNX27-201ENST00000368838 SIVA1O15304 175 aa6.03□□□□□ -1.44
SNX27-201ENST00000368838 HTN3P15516 51 aa6.03□□□□□ -1.44
SNX27-201ENST00000368838 SPATA45Q537H7 98 aa6.03□□□□□ -1.44
SNX27-201ENST00000368838 C15orf53Q8NAA6 179 aa6.03□□□□□ -1.44
SNX27-201ENST00000368838 C2orf88Q9BSF0 95 aa6.03□□□□□ -1.44
SNX27-201ENST00000368838 UQCR10Q9UDW1 63 aa6.03□□□□□ -1.44
SNX27-201ENST00000368838 IGHV3-38A0A0C4DH36 116 aa6.02□□□□□ -1.45
SNX27-201ENST00000368838 TINCRA0A1B0GVN0 87 aa6.02□□□□□ -1.45
SNX27-201ENST00000368838 E9PLD3 99 aa6.02□□□□□ -1.45
SNX27-201ENST00000368838 COX8AP10176 69 aa6.02□□□□□ -1.45
SNX27-201ENST00000368838 LCE3BQ5TA77 95 aa6.02□□□□□ -1.45
SNX27-201ENST00000368838 OR5A1Q8NGJ0 315 aa6.02□□□□□ -1.45
SNX27-201ENST00000368838 MRPS16Q9Y3D3 137 aaKnown RBP6.02□□□□□ -1.45
SNX27-201ENST00000368838 A0A1B0GVY2 172 aa6.01□□□□□ -1.45
SNX27-201ENST00000368838 UBE2L6O14933 153 aa6.01□□□□□ -1.45
SNX27-201ENST00000368838 RTL8CO15255 209 aa6.01□□□□□ -1.45
SNX27-201ENST00000368838 DDTP30046 118 aa6.01□□□□□ -1.45
SNX27-201ENST00000368838 UBE2D1P51668 147 aa6.01□□□□□ -1.45
SNX27-201ENST00000368838 ZC2HC1BQ5TFG8 222 aa6.01□□□□□ -1.45
SNX27-201ENST00000368838 UBE2DNLQ8IWF7 75 aa6.01□□□□□ -1.45
SNX27-201ENST00000368838 BOD1L2Q8IYS8 172 aa6.01□□□□□ -1.45
SNX27-201ENST00000368838 LINC01561Q8N1V8 128 aa6.01□□□□□ -1.45
SNX27-201ENST00000368838 TMEM101Q96IK0 257 aa6.01□□□□□ -1.45
SNX27-201ENST00000368838 PAM16Q9Y3D7 125 aa6.01□□□□□ -1.45
SNX27-201ENST00000368838 ABCA13Q86UQ4 5058 aa6.01□□□□□ -1.45
SNX27-201ENST00000368838 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6□□□□□ -1.45
SNX27-201ENST00000368838 IGKV2-29A2NJV5 120 aaPredicted RBP6□□□□□ -1.45
SNX27-201ENST00000368838 K7EP13 123 aa6□□□□□ -1.45
SNX27-201ENST00000368838 HERVK_113P63121 156 aa6□□□□□ -1.45
SNX27-201ENST00000368838 LYPD5Q6UWN5 251 aa6□□□□□ -1.45
SNX27-201ENST00000368838 hDV102S1A0JD36 115 aa5.99□□□□□ -1.45
SNX27-201ENST00000368838 HERVK_113P61574 105 aa5.99□□□□□ -1.45
SNX27-201ENST00000368838 AMMECR1LQ6DCA0 310 aa5.99□□□□□ -1.45
SNX27-201ENST00000368838 SLC25A34Q6PIV7 304 aa5.99□□□□□ -1.45
SNX27-201ENST00000368838 Q6ZUT4 128 aa5.99□□□□□ -1.45
SNX27-201ENST00000368838 HIGD1BQ9P298 99 aa5.99□□□□□ -1.45
SNX27-201ENST00000368838 TMEM223A0PJW6 202 aa5.99□□□□□ -1.45
SNX27-201ENST00000368838 ZNF22P17026 224 aaPredicted RBP5.99□□□□□ -1.45
SNX27-201ENST00000368838 LBHQ53QV2 105 aaPredicted RBP5.99□□□□□ -1.45
SNX27-201ENST00000368838 LINC00242Q5T6M2 205 aa5.99□□□□□ -1.45
SNX27-201ENST00000368838 LINC00336Q6ZUF6 198 aa5.99□□□□□ -1.45
SNX27-201ENST00000368838 ATOH7Q8N100 152 aa5.99□□□□□ -1.45
SNX27-201ENST00000368838 OPRPNQ99935 248 aaPredicted RBP5.99□□□□□ -1.45
SNX27-201ENST00000368838 CHCHD5Q9BSY4 110 aa5.99□□□□□ -1.45
SNX27-201ENST00000368838 CHAC1Q9BUX1 264 aa5.99□□□□□ -1.45
SNX27-201ENST00000368838 PRR34Q9NV39 138 aa5.99□□□□□ -1.45
SNX27-201ENST00000368838 IGLV5-39A0A0G2JS06 123 aa5.98□□□□□ -1.45
SNX27-201ENST00000368838 A0A0J9YXV3 536 aa5.98□□□□□ -1.45
SNX27-201ENST00000368838 PCP4L1A6NKN8 68 aa5.98□□□□□ -1.45
SNX27-201ENST00000368838 TRIAP1O43715 76 aa5.98□□□□□ -1.45
SNX27-201ENST00000368838 RBX1P62877 108 aa5.98□□□□□ -1.45
SNX27-201ENST00000368838 STPG4Q8N801 248 aa5.98□□□□□ -1.45
SNX27-201ENST00000368838 UPK3BQ9BT76 320 aa5.98□□□□□ -1.45
SNX27-201ENST00000368838 TRAV8-6A0A0B4J262 113 aa5.97□□□□□ -1.45
SNX27-201ENST00000368838 IGHV3OR16-9A0A0B4J2B5 98 aa5.97□□□□□ -1.45
SNX27-201ENST00000368838 IGHV1-58A0A0C4DH39 117 aa5.97□□□□□ -1.45
SNX27-201ENST00000368838 A0A0J9YY99 117 aa5.97□□□□□ -1.45
SNX27-201ENST00000368838 H3BRM9 83 aa5.97□□□□□ -1.45
SNX27-201ENST00000368838 NMUP48645 174 aa5.97□□□□□ -1.45
SNX27-201ENST00000368838 PLEKHB2Q96CS7 222 aa5.97□□□□□ -1.45
SNX27-201ENST00000368838 IGLV4-60A0A075B6I1 120 aa5.96□□□□□ -1.46
SNX27-201ENST00000368838 TRAV8-4A0A0B4J246 113 aa5.96□□□□□ -1.46
SNX27-201ENST00000368838 LEPROTO15243 131 aa5.96□□□□□ -1.46
SNX27-201ENST00000368838 GAGE6Q13070 117 aa5.96□□□□□ -1.46
SNX27-201ENST00000368838 TAL2Q16559 108 aa5.96□□□□□ -1.46
SNX27-201ENST00000368838 LINC01556Q5JQF7 62 aa5.96□□□□□ -1.46
SNX27-201ENST00000368838 SFTA2Q6UW10 78 aa5.96□□□□□ -1.46
SNX27-201ENST00000368838 KRTAP4-5Q9BYR2 181 aa5.96□□□□□ -1.46
SNX27-201ENST00000368838 PRO1933Q9H354 126 aa5.96□□□□□ -1.46
SNX27-201ENST00000368838 PPDPFQ9H3Y8 114 aa5.96□□□□□ -1.46
SNX27-201ENST00000368838 GEMIN7Q9H840 131 aaKnown RBP5.96□□□□□ -1.46
SNX27-201ENST00000368838 HSPG2P98160 4391 aa5.96□□□□□ -1.46
SNX27-201ENST00000368838 A0A087WZ39 114 aa5.95□□□□□ -1.46
SNX27-201ENST00000368838 IGKV2D-26A0A0A0MRZ7 120 aa5.95□□□□□ -1.46
SNX27-201ENST00000368838 LINC00959A0A1B0GUT2 108 aa5.95□□□□□ -1.46
SNX27-201ENST00000368838 DNAH10OSP0CZ25 163 aa5.95□□□□□ -1.46
SNX27-201ENST00000368838 MPV17L2Q567V2 206 aa5.95□□□□□ -1.46
SNX27-201ENST00000368838 TMEM170BQ5T4T1 132 aa5.95□□□□□ -1.46
SNX27-201ENST00000368838 Q6ZR54 194 aa5.95□□□□□ -1.46
SNX27-201ENST00000368838 DEFB104AQ8WTQ1 72 aa5.95□□□□□ -1.46
SNX27-201ENST00000368838 C14orf144Q96I85 54 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms