RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 TIMM21Q9BVV7 248 aa6.07□□□□□ -1.44
TPM3-213ENST00000368545 UBE2D4Q9Y2X8 147 aa6.07□□□□□ -1.44
TPM3-213ENST00000368545 IGLV4-3A0A075B6K6 122 aa6.07□□□□□ -1.44
TPM3-213ENST00000368545 LOC100131303A0A0U1RQF7 123 aa6.07□□□□□ -1.44
TPM3-213ENST00000368545 H7C423 109 aa6.07□□□□□ -1.44
TPM3-213ENST00000368545 NTN5Q8WTR8 489 aaPredicted RBP6.07□□□□□ -1.44
TPM3-213ENST00000368545 MIEN1Q9BRT3 115 aa6.07□□□□□ -1.44
TPM3-213ENST00000368545 RETNQ9HD89 108 aa6.07□□□□□ -1.44
TPM3-213ENST00000368545 UQCR10Q9UDW1 63 aa6.07□□□□□ -1.44
TPM3-213ENST00000368545 TRBV25-1A0A075B6N4 114 aa6.06□□□□□ -1.44
TPM3-213ENST00000368545 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.06□□□□□ -1.44
TPM3-213ENST00000368545 IGKV2-29A2NJV5 120 aaPredicted RBP6.06□□□□□ -1.44
TPM3-213ENST00000368545 IGLC3P0DOY3 106 aa6.06□□□□□ -1.44
TPM3-213ENST00000368545 SBSPONQ8IVN8 264 aa6.06□□□□□ -1.44
TPM3-213ENST00000368545 LINC01561Q8N1V8 128 aa6.06□□□□□ -1.44
TPM3-213ENST00000368545 CST9LQ9H4G1 147 aa6.06□□□□□ -1.44
TPM3-213ENST00000368545 CSDC2Q9Y534 153 aaKnown RBP6.06□□□□□ -1.44
TPM3-213ENST00000368545 HYDINQ4G0P3 5121 aa6.06□□□□□ -1.44
TPM3-213ENST00000368545 NUPR2A6NF83 97 aa6.05□□□□□ -1.44
TPM3-213ENST00000368545 UBE2L6O14933 153 aa6.05□□□□□ -1.44
TPM3-213ENST00000368545 MRPS36P82909 103 aaKnown RBP6.05□□□□□ -1.44
TPM3-213ENST00000368545 NTM-AS1Q6ZSK4 140 aa6.05□□□□□ -1.44
TPM3-213ENST00000368545 MRPL52Q86TS9 123 aaKnown RBP6.05□□□□□ -1.44
TPM3-213ENST00000368545 TMEM243Q9BU79 118 aa6.05□□□□□ -1.44
TPM3-213ENST00000368545 GEMIN7Q9H840 131 aaKnown RBP6.05□□□□□ -1.44
TPM3-213ENST00000368545 PCLOQ9Y6V0 5065 aa6.05□□□□□ -1.44
TPM3-213ENST00000368545 ZNF25P17030 456 aaPredicted RBP6.05□□□□□ -1.44
TPM3-213ENST00000368545 ZC2HC1BQ5TFG8 222 aa6.05□□□□□ -1.44
TPM3-213ENST00000368545 SH2D6Q7Z4S9 175 aa6.05□□□□□ -1.44
TPM3-213ENST00000368545 ATP6V0E2Q8NHE4 81 aa6.05□□□□□ -1.44
TPM3-213ENST00000368545 AMELXQ99217 191 aa6.05□□□□□ -1.44
TPM3-213ENST00000368545 TRBV6-8A0A0A6YYG3 113 aa6.04□□□□□ -1.44
TPM3-213ENST00000368545 F5H768 121 aa6.04□□□□□ -1.44
TPM3-213ENST00000368545 STPG4Q8N801 248 aa6.04□□□□□ -1.44
TPM3-213ENST00000368545 IGLV4-69A0A075B6H9 119 aa6.04□□□□□ -1.44
TPM3-213ENST00000368545 C12orf74Q32Q52 190 aa6.04□□□□□ -1.44
TPM3-213ENST00000368545 SLC25A34Q6PIV7 304 aa6.04□□□□□ -1.44
TPM3-213ENST00000368545 PRAC1Q96KF2 57 aa6.04□□□□□ -1.44
TPM3-213ENST00000368545 KLK5Q9Y337 293 aaPredicted RBP6.04□□□□□ -1.44
TPM3-213ENST00000368545 LY6G6CO95867 125 aa6.03□□□□□ -1.44
TPM3-213ENST00000368545 COX8AP10176 69 aa6.03□□□□□ -1.44
TPM3-213ENST00000368545 FGF6P10767 208 aa6.03□□□□□ -1.44
TPM3-213ENST00000368545 AMMECR1LQ6DCA0 310 aa6.03□□□□□ -1.44
TPM3-213ENST00000368545 TMEM101Q96IK0 257 aa6.03□□□□□ -1.44
TPM3-213ENST00000368545 VSIG2Q96IQ7 327 aa6.03□□□□□ -1.44
TPM3-213ENST00000368545 A0A0J9YWU9 116 aa6.02□□□□□ -1.45
TPM3-213ENST00000368545 H3BNG1 76 aa6.02□□□□□ -1.45
TPM3-213ENST00000368545 HTN3P15516 51 aa6.02□□□□□ -1.45
TPM3-213ENST00000368545 HERVK_113P61574 105 aa6.02□□□□□ -1.45
TPM3-213ENST00000368545 MRPL23Q16540 153 aaKnown RBP6.02□□□□□ -1.45
TPM3-213ENST00000368545 CEMP1Q6PRD7 247 aaPredicted RBP6.02□□□□□ -1.45
TPM3-213ENST00000368545 Q6ZUT4 128 aa6.02□□□□□ -1.45
TPM3-213ENST00000368545 OPRPNQ99935 248 aaPredicted RBP6.02□□□□□ -1.45
TPM3-213ENST00000368545 ICOSQ9Y6W8 199 aa6.02□□□□□ -1.45
TPM3-213ENST00000368545 A0A0J9YY99 117 aa6.02□□□□□ -1.45
TPM3-213ENST00000368545 C11orf86A6NJI1 115 aa6.02□□□□□ -1.45
TPM3-213ENST00000368545 HNRNPA3P51991 378 aaKnown RBP6.02□□□□□ -1.45
TPM3-213ENST00000368545 OR5A1Q8NGJ0 315 aa6.02□□□□□ -1.45
TPM3-213ENST00000368545 FAM104AQ969W3 186 aa6.02□□□□□ -1.45
TPM3-213ENST00000368545 CHAC1Q9BUX1 264 aa6.02□□□□□ -1.45
TPM3-213ENST00000368545 NMUP48645 174 aa6.01□□□□□ -1.45
TPM3-213ENST00000368545 TCTAP57738 103 aa6.01□□□□□ -1.45
TPM3-213ENST00000368545 CHCHD5Q9BSY4 110 aa6.01□□□□□ -1.45
TPM3-213ENST00000368545 DNAH9Q9NYC9 4486 aa6.01□□□□□ -1.45
TPM3-213ENST00000368545 TINCRA0A1B0GVN0 87 aa6.01□□□□□ -1.45
TPM3-213ENST00000368545 SEC11AP67812 179 aa6.01□□□□□ -1.45
TPM3-213ENST00000368545 C11orf45Q8TAV5 145 aa6.01□□□□□ -1.45
TPM3-213ENST00000368545 SACSQ9NZJ4 4579 aa6□□□□□ -1.45
TPM3-213ENST00000368545 E9PLD3 99 aa6□□□□□ -1.45
TPM3-213ENST00000368545 TMEM170BQ5T4T1 132 aa6□□□□□ -1.45
TPM3-213ENST00000368545 Q6ZTC4 211 aa6□□□□□ -1.45
TPM3-213ENST00000368545 BOD1L2Q8IYS8 172 aa6□□□□□ -1.45
TPM3-213ENST00000368545 CDC42SE2Q9NRR3 84 aa6□□□□□ -1.45
TPM3-213ENST00000368545 MRPS16Q9Y3D3 137 aaKnown RBP6□□□□□ -1.45
TPM3-213ENST00000368545 SLPIP03973 132 aa5.99□□□□□ -1.45
TPM3-213ENST00000368545 UBE2D1P51668 147 aa5.99□□□□□ -1.45
TPM3-213ENST00000368545 RNASE13Q5GAN3 156 aaKnown RBP5.99□□□□□ -1.45
TPM3-213ENST00000368545 FAM19A3Q7Z5A8 133 aa5.99□□□□□ -1.45
TPM3-213ENST00000368545 IGKV2D-26A0A0A0MRZ7 120 aa5.99□□□□□ -1.45
TPM3-213ENST00000368545 A0A0J9YXV3 536 aa5.99□□□□□ -1.45
TPM3-213ENST00000368545 A0A1B0GUV1 79 aa5.99□□□□□ -1.45
TPM3-213ENST00000368545 SIVA1O15304 175 aa5.99□□□□□ -1.45
TPM3-213ENST00000368545 A0A096LPF7 62 aa5.98□□□□□ -1.45
TPM3-213ENST00000368545 ZNF22P17026 224 aaPredicted RBP5.98□□□□□ -1.45
TPM3-213ENST00000368545 HERVK_113P63121 156 aa5.98□□□□□ -1.45
TPM3-213ENST00000368545 LELP1Q5T871 98 aa5.98□□□□□ -1.45
TPM3-213ENST00000368545 ALMS1Q8TCU4 4167 aa5.98□□□□□ -1.45
TPM3-213ENST00000368545 K7EP13 123 aa5.98□□□□□ -1.45
TPM3-213ENST00000368545 RPL13AP40429 203 aaKnown RBP5.98□□□□□ -1.45
TPM3-213ENST00000368545 PCP2Q8IVA1 136 aa5.98□□□□□ -1.45
TPM3-213ENST00000368545 DEFB131BA0A096LNP1 70 aa5.97□□□□□ -1.45
TPM3-213ENST00000368545 TRAV8-6A0A0B4J262 113 aa5.97□□□□□ -1.45
TPM3-213ENST00000368545 TMEM223A0PJW6 202 aa5.97□□□□□ -1.45
TPM3-213ENST00000368545 H3BRM9 83 aa5.97□□□□□ -1.45
TPM3-213ENST00000368545 M0R143 59 aa5.97□□□□□ -1.45
TPM3-213ENST00000368545 NANOS2P60321 138 aaKnown RBP5.97□□□□□ -1.45
TPM3-213ENST00000368545 TRAV10A0A0B4J240 114 aa5.96□□□□□ -1.45
TPM3-213ENST00000368545 SMIM1B2RUZ4 78 aa5.96□□□□□ -1.45
TPM3-213ENST00000368545 IGLV4-60A0A075B6I1 120 aa5.96□□□□□ -1.46
TPM3-213ENST00000368545 MYMXA0A1B0GTQ4 84 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms