RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 GNB1LQ9BYB4 327 aa6.35□□□□□ -1.39
CD48-202ENST00000368046 SPANXA1Q9NS26 97 aa6.35□□□□□ -1.39
CD48-202ENST00000368046 GVQW2A0A096LPI5 108 aaPredicted RBP6.34□□□□□ -1.39
CD48-202ENST00000368046 TRAV13-1A0A0B4J241 112 aa6.34□□□□□ -1.39
CD48-202ENST00000368046 IGHV1-58A0A0C4DH39 117 aa6.34□□□□□ -1.39
CD48-202ENST00000368046 K7EMI3 77 aa6.34□□□□□ -1.39
CD48-202ENST00000368046 RHEBQ15382 184 aa6.34□□□□□ -1.39
CD48-202ENST00000368046 COX19Q49B96 90 aa6.34□□□□□ -1.39
CD48-202ENST00000368046 RNASE13Q5GAN3 156 aaKnown RBP6.34□□□□□ -1.39
CD48-202ENST00000368046 FAM104AQ969W3 186 aa6.34□□□□□ -1.39
CD48-202ENST00000368046 RPS10P5Q9NQ39 176 aa6.34□□□□□ -1.39
CD48-202ENST00000368046 PYGO1Q9Y3Y4 419 aa6.34□□□□□ -1.39
CD48-202ENST00000368046 IGHV3-64A0A075B6Q5 118 aa6.33□□□□□ -1.4
CD48-202ENST00000368046 HIGD2BQ4VC39 106 aa6.33□□□□□ -1.4
CD48-202ENST00000368046 ORMDL2Q53FV1 153 aa6.33□□□□□ -1.4
CD48-202ENST00000368046 Q6ZUT4 128 aa6.33□□□□□ -1.4
CD48-202ENST00000368046 OPRPNQ99935 248 aaPredicted RBP6.33□□□□□ -1.4
CD48-202ENST00000368046 NXT2Q9NPJ8 142 aaKnown RBP6.33□□□□□ -1.4
CD48-202ENST00000368046 ZNF561-AS1K7EIQ3 104 aa6.32□□□□□ -1.4
CD48-202ENST00000368046 COX7A2LO14548 114 aa6.32□□□□□ -1.4
CD48-202ENST00000368046 INAFM2P0DMQ5 153 aa6.32□□□□□ -1.4
CD48-202ENST00000368046 MALP21145 153 aa6.32□□□□□ -1.4
CD48-202ENST00000368046 G0S2P27469 103 aa6.32□□□□□ -1.4
CD48-202ENST00000368046 IFI27P40305 119 aaPredicted RBP6.32□□□□□ -1.4
CD48-202ENST00000368046 KIAA1644Q3SXP7 199 aa6.32□□□□□ -1.4
CD48-202ENST00000368046 DPH3Q96FX2 82 aa6.32□□□□□ -1.4
CD48-202ENST00000368046 APOC3P02656 99 aa6.31□□□□□ -1.4
CD48-202ENST00000368046 PLA2G1BP04054 148 aaKnown RBP6.31□□□□□ -1.4
CD48-202ENST00000368046 CYSLTR1Q9Y271 337 aa6.31□□□□□ -1.4
CD48-202ENST00000368046 SRRM2Q9UQ35 2752 aaKnown RBP6.3□□□□□ -1.4
CD48-202ENST00000368046 IGHV3OR16-9A0A0B4J2B5 98 aa6.3□□□□□ -1.4
CD48-202ENST00000368046 PANO1I0J062 215 aa6.3□□□□□ -1.4
CD48-202ENST00000368046 SNAPINO95295 136 aa6.3□□□□□ -1.4
CD48-202ENST00000368046 APOMO95445 188 aa6.3□□□□□ -1.4
CD48-202ENST00000368046 MT-ND6P03923 174 aa6.3□□□□□ -1.4
CD48-202ENST00000368046 COX6A2Q02221 97 aa6.3□□□□□ -1.4
CD48-202ENST00000368046 CIRBPQ14011 172 aaKnown RBP6.3□□□□□ -1.4
CD48-202ENST00000368046 NDUFA5Q16718 116 aa6.3□□□□□ -1.4
CD48-202ENST00000368046 C2orf66Q6UXQ4 117 aa6.3□□□□□ -1.4
CD48-202ENST00000368046 C5orf38Q86SI9 138 aa6.3□□□□□ -1.4
CD48-202ENST00000368046 PRSS3P2Q8NHM4 247 aa6.3□□□□□ -1.4
CD48-202ENST00000368046 ALKBH7Q9BT30 221 aaPredicted RBP6.3□□□□□ -1.4
CD48-202ENST00000368046 IGLV4-3A0A075B6K6 122 aa6.29□□□□□ -1.4
CD48-202ENST00000368046 IFITM10A6NMD0 228 aa6.29□□□□□ -1.4
CD48-202ENST00000368046 NPSP0C0P6 89 aa6.29□□□□□ -1.4
CD48-202ENST00000368046 FABP9Q0Z7S8 132 aa6.29□□□□□ -1.4
CD48-202ENST00000368046 SVBPQ8N300 66 aa6.29□□□□□ -1.4
CD48-202ENST00000368046 LINC00526Q96FQ7 95 aa6.29□□□□□ -1.4
CD48-202ENST00000368046 TMEM141Q96I45 108 aa6.29□□□□□ -1.4
CD48-202ENST00000368046 VCX2Q9H322 139 aa6.29□□□□□ -1.4
CD48-202ENST00000368046 IGLV4-69A0A075B6H9 119 aa6.28□□□□□ -1.4
CD48-202ENST00000368046 IGIPA6NJ69 53 aa6.28□□□□□ -1.4
CD48-202ENST00000368046 SYCNQ0VAF6 134 aa6.28□□□□□ -1.4
CD48-202ENST00000368046 TEX43Q6ZNM6 134 aa6.28□□□□□ -1.4
CD48-202ENST00000368046 C2orf48Q96LS8 159 aa6.28□□□□□ -1.4
CD48-202ENST00000368046 PKIGQ9Y2B9 76 aa6.28□□□□□ -1.4
CD48-202ENST00000368046 TGIF2-C20orf24A0A0A6YYL0 155 aa6.27□□□□□ -1.41
CD48-202ENST00000368046 LINC01546A6NGU7 62 aa6.27□□□□□ -1.41
CD48-202ENST00000368046 LINC01549A6NIU2 74 aa6.27□□□□□ -1.41
CD48-202ENST00000368046 PAPPA-AS1Q5QFB9 102 aa6.27□□□□□ -1.41
CD48-202ENST00000368046 LINC00242Q5T6M2 205 aa6.27□□□□□ -1.41
CD48-202ENST00000368046 Q6ZN92 141 aa6.27□□□□□ -1.41
CD48-202ENST00000368046 OR10D4PQ8NGN7 298 aa6.27□□□□□ -1.41
CD48-202ENST00000368046 TOMM6Q96B49 74 aa6.27□□□□□ -1.41
CD48-202ENST00000368046 CARD19Q96LW7 228 aa6.27□□□□□ -1.41
CD48-202ENST00000368046 AMELXQ99217 191 aa6.27□□□□□ -1.41
CD48-202ENST00000368046 TRAPPC1Q9Y5R8 145 aa6.27□□□□□ -1.41
CD48-202ENST00000368046 A0A087WYN8 130 aa6.26□□□□□ -1.41
CD48-202ENST00000368046 CHTF8P0CG12 524 aa6.26□□□□□ -1.41
CD48-202ENST00000368046 UBE2D1P51668 147 aa6.26□□□□□ -1.41
CD48-202ENST00000368046 ERASQ7Z444 233 aa6.26□□□□□ -1.41
CD48-202ENST00000368046 SPACA4Q8TDM5 124 aa6.26□□□□□ -1.41
CD48-202ENST00000368046 CAMK2N2Q96S95 79 aa6.26□□□□□ -1.41
CD48-202ENST00000368046 C2orf88Q9BSF0 95 aa6.26□□□□□ -1.41
CD48-202ENST00000368046 LINC00474Q9P2X8 69 aa6.26□□□□□ -1.41
CD48-202ENST00000368046 A0A087WZ39 114 aa6.25□□□□□ -1.41
CD48-202ENST00000368046 F8WDY8 70 aa6.25□□□□□ -1.41
CD48-202ENST00000368046 MAJINQ3KP22 176 aa6.25□□□□□ -1.41
CD48-202ENST00000368046 Q6ZRU5 148 aa6.25□□□□□ -1.41
CD48-202ENST00000368046 LINC00173Q6ZV60 143 aa6.25□□□□□ -1.41
CD48-202ENST00000368046 FAM19A3Q7Z5A8 133 aa6.25□□□□□ -1.41
CD48-202ENST00000368046 SCGB3A1Q96QR1 104 aa6.25□□□□□ -1.41
CD48-202ENST00000368046 TIMM17AQ99595 171 aa6.25□□□□□ -1.41
CD48-202ENST00000368046 PLAC8Q9NZF1 115 aa6.25□□□□□ -1.41
CD48-202ENST00000368046 A0A096LNI7 61 aa6.24□□□□□ -1.41
CD48-202ENST00000368046 IGKV2-24A0A0C4DH68 120 aa6.24□□□□□ -1.41
CD48-202ENST00000368046 KRTAP10-4P60372 401 aaPredicted RBP6.24□□□□□ -1.41
CD48-202ENST00000368046 SEC11AP67812 179 aa6.24□□□□□ -1.41
CD48-202ENST00000368046 SPAG11BQ08648 103 aa6.24□□□□□ -1.41
CD48-202ENST00000368046 RNF151Q2KHN1 245 aa6.24□□□□□ -1.41
CD48-202ENST00000368046 ZC2HC1BQ5TFG8 222 aa6.24□□□□□ -1.41
CD48-202ENST00000368046 FA2HQ7L5A8 372 aa6.24□□□□□ -1.41
CD48-202ENST00000368046 LINC01561Q8N1V8 128 aa6.24□□□□□ -1.41
CD48-202ENST00000368046 ORAOV1Q8WV07 137 aa6.24□□□□□ -1.41
CD48-202ENST00000368046 LOC107984640A0A0U1RRK4 108 aa6.23□□□□□ -1.41
CD48-202ENST00000368046 LINC00614P0C842 121 aa6.23□□□□□ -1.41
CD48-202ENST00000368046 RPL37AP61513 92 aaKnown RBP6.23□□□□□ -1.41
CD48-202ENST00000368046 KIAA0087Q14695 138 aa6.23□□□□□ -1.41
CD48-202ENST00000368046 ANKRD39Q53RE8 183 aa6.23□□□□□ -1.41
CD48-202ENST00000368046 STPG4Q8N801 248 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms