RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.39□□□□□ -0.91
SF3B5-201ENST00000367569 J3QL48 77 aa9.39□□□□□ -0.91
SF3B5-201ENST00000367569 MRPS36P82909 103 aaKnown RBP9.39□□□□□ -0.91
SF3B5-201ENST00000367569 NXT2Q9NPJ8 142 aaKnown RBP9.39□□□□□ -0.91
SF3B5-201ENST00000367569 FAT3Q8TDW7 4589 aa9.39□□□□□ -0.91
SF3B5-201ENST00000367569 IGKV2-24A0A0C4DH68 120 aa9.38□□□□□ -0.91
SF3B5-201ENST00000367569 ORMDL2Q53FV1 153 aa9.38□□□□□ -0.91
SF3B5-201ENST00000367569 SDIM1Q6ZPB5 146 aa9.38□□□□□ -0.91
SF3B5-201ENST00000367569 TMEM141Q96I45 108 aa9.38□□□□□ -0.91
SF3B5-201ENST00000367569 IGLV4-69A0A075B6H9 119 aa9.37□□□□□ -0.91
SF3B5-201ENST00000367569 MT-ND6P03923 174 aa9.37□□□□□ -0.91
SF3B5-201ENST00000367569 COX6A2Q02221 97 aa9.37□□□□□ -0.91
SF3B5-201ENST00000367569 LINC00173Q6ZV60 143 aa9.37□□□□□ -0.91
SF3B5-201ENST00000367569 CBLN2Q8IUK8 224 aa9.37□□□□□ -0.91
SF3B5-201ENST00000367569 PRSS3P2Q8NHM4 247 aa9.37□□□□□ -0.91
SF3B5-201ENST00000367569 CARD19Q96LW7 228 aa9.37□□□□□ -0.91
SF3B5-201ENST00000367569 ZNF561-AS1K7EIQ3 104 aa9.36□□□□□ -0.91
SF3B5-201ENST00000367569 SPAG11BQ08648 103 aa9.36□□□□□ -0.91
SF3B5-201ENST00000367569 TEX43Q6ZNM6 134 aa9.36□□□□□ -0.91
SF3B5-201ENST00000367569 TRAPPC1Q9Y5R8 145 aa9.36□□□□□ -0.91
SF3B5-201ENST00000367569 KRTAP29-1A8MX34 341 aaPredicted RBP9.35□□□□□ -0.91
SF3B5-201ENST00000367569 COX19Q49B96 90 aa9.35□□□□□ -0.91
SF3B5-201ENST00000367569 ORAOV1Q8WV07 137 aa9.35□□□□□ -0.91
SF3B5-201ENST00000367569 PYGO1Q9Y3Y4 419 aa9.35□□□□□ -0.91
SF3B5-201ENST00000367569 A0A096LNI7 61 aa9.34□□□□□ -0.91
SF3B5-201ENST00000367569 KRTAP10-4P60372 401 aaPredicted RBP9.34□□□□□ -0.91
SF3B5-201ENST00000367569 LINC00242Q5T6M2 205 aa9.34□□□□□ -0.91
SF3B5-201ENST00000367569 Q6ZN92 141 aa9.34□□□□□ -0.91
SF3B5-201ENST00000367569 Q6ZRU5 148 aa9.34□□□□□ -0.91
SF3B5-201ENST00000367569 FA2HQ7L5A8 372 aa9.34□□□□□ -0.91
SF3B5-201ENST00000367569 PKHD1L1Q86WI1 4243 aa9.34□□□□□ -0.91
SF3B5-201ENST00000367569 IGHV3OR16-9A0A0B4J2B5 98 aa9.33□□□□□ -0.92
SF3B5-201ENST00000367569 A0A0J9YXV3 536 aa9.33□□□□□ -0.92
SF3B5-201ENST00000367569 IGIPA6NJ69 53 aa9.33□□□□□ -0.92
SF3B5-201ENST00000367569 UBE2D1P51668 147 aa9.33□□□□□ -0.92
SF3B5-201ENST00000367569 SYCNQ0VAF6 134 aa9.33□□□□□ -0.92
SF3B5-201ENST00000367569 SPACA4Q8TDM5 124 aa9.33□□□□□ -0.92
SF3B5-201ENST00000367569 TOMM6Q96B49 74 aa9.33□□□□□ -0.92
SF3B5-201ENST00000367569 YPEL4Q96NS1 127 aa9.33□□□□□ -0.92
SF3B5-201ENST00000367569 CAMK2N2Q96S95 79 aa9.33□□□□□ -0.92
SF3B5-201ENST00000367569 C2orf88Q9BSF0 95 aa9.33□□□□□ -0.92
SF3B5-201ENST00000367569 SMCO4Q9NRQ5 59 aa9.33□□□□□ -0.92
SF3B5-201ENST00000367569 PMCHL1Q16048 86 aa9.32□□□□□ -0.92
SF3B5-201ENST00000367569 MAJINQ3KP22 176 aa9.32□□□□□ -0.92
SF3B5-201ENST00000367569 C18orf32Q8TCD1 76 aa9.32□□□□□ -0.92
SF3B5-201ENST00000367569 DPH3Q96FX2 82 aa9.32□□□□□ -0.92
SF3B5-201ENST00000367569 URB1-AS1Q96HZ7 61 aa9.32□□□□□ -0.92
SF3B5-201ENST00000367569 HMCN2Q8NDA2 5059 aa9.32□□□□□ -0.92
SF3B5-201ENST00000367569 A0A087WYN8 130 aa9.31□□□□□ -0.92
SF3B5-201ENST00000367569 K7EMI3 77 aa9.31□□□□□ -0.92
SF3B5-201ENST00000367569 SCGB3A1Q96QR1 104 aa9.31□□□□□ -0.92
SF3B5-201ENST00000367569 AMELXQ99217 191 aa9.31□□□□□ -0.92
SF3B5-201ENST00000367569 VCX2Q9H322 139 aa9.31□□□□□ -0.92
SF3B5-201ENST00000367569 APOMO95445 188 aa9.3□□□□□ -0.92
SF3B5-201ENST00000367569 CIRBPQ14011 172 aaKnown RBP9.3□□□□□ -0.92
SF3B5-201ENST00000367569 GAGE2BQ13066 116 aa9.29□□□□□ -0.92
SF3B5-201ENST00000367569 C10orf25Q5T742 122 aa9.29□□□□□ -0.92
SF3B5-201ENST00000367569 TIMM17AQ99595 171 aa9.29□□□□□ -0.92
SF3B5-201ENST00000367569 A0A096LNJ9 63 aa9.28□□□□□ -0.92
SF3B5-201ENST00000367569 LINC01546A6NGU7 62 aa9.28□□□□□ -0.92
SF3B5-201ENST00000367569 RPL18AQ02543 176 aaKnown RBP9.28□□□□□ -0.92
SF3B5-201ENST00000367569 OR10D4PQ8NGN7 298 aa9.28□□□□□ -0.92
SF3B5-201ENST00000367569 A0A087WZ39 114 aa9.27□□□□□ -0.93
SF3B5-201ENST00000367569 RPL37AP61513 92 aaKnown RBP9.27□□□□□ -0.93
SF3B5-201ENST00000367569 C2orf82Q6UX34 121 aa9.27□□□□□ -0.93
SF3B5-201ENST00000367569 ERASQ7Z444 233 aa9.27□□□□□ -0.93
SF3B5-201ENST00000367569 STPG4Q8N801 248 aa9.27□□□□□ -0.93
SF3B5-201ENST00000367569 TOMM7Q9P0U1 55 aa9.27□□□□□ -0.93
SF3B5-201ENST00000367569 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.26□□□□□ -0.93
SF3B5-201ENST00000367569 UNQ6190/PRO20217Q6UXQ8 127 aa9.26□□□□□ -0.93
SF3B5-201ENST00000367569 C2orf48Q96LS8 159 aa9.26□□□□□ -0.93
SF3B5-201ENST00000367569 CDKN2A-AS1Q9UH64 79 aa9.26□□□□□ -0.93
SF3B5-201ENST00000367569 LOC107984640A0A0U1RRK4 108 aa9.25□□□□□ -0.93
SF3B5-201ENST00000367569 HNRNPA3P51991 378 aaKnown RBP9.25□□□□□ -0.93
SF3B5-201ENST00000367569 NDUFA1O15239 70 aa9.24□□□□□ -0.93
SF3B5-201ENST00000367569 SCO1O75880 301 aa9.24□□□□□ -0.93
SF3B5-201ENST00000367569 NPSP0C0P6 89 aa9.24□□□□□ -0.93
SF3B5-201ENST00000367569 G0S2P27469 103 aa9.24□□□□□ -0.93
SF3B5-201ENST00000367569 NDUFA6P56556 154 aa9.24□□□□□ -0.93
SF3B5-201ENST00000367569 PAPPA-AS1Q5QFB9 102 aa9.24□□□□□ -0.93
SF3B5-201ENST00000367569 LINC00469Q8N7U9 141 aa9.24□□□□□ -0.93
SF3B5-201ENST00000367569 GEMIN7Q9H840 131 aaKnown RBP9.24□□□□□ -0.93
SF3B5-201ENST00000367569 PLAC8Q9NZF1 115 aa9.24□□□□□ -0.93
SF3B5-201ENST00000367569 C6orf48Q9UBA6 75 aa9.24□□□□□ -0.93
SF3B5-201ENST00000367569 OXTP01178 125 aa9.23□□□□□ -0.93
SF3B5-201ENST00000367569 HBDP02042 147 aa9.23□□□□□ -0.93
SF3B5-201ENST00000367569 LINC00614P0C842 121 aa9.23□□□□□ -0.93
SF3B5-201ENST00000367569 PTTG1IPP53801 180 aa9.23□□□□□ -0.93
SF3B5-201ENST00000367569 KIAA0087Q14695 138 aa9.23□□□□□ -0.93
SF3B5-201ENST00000367569 UBR4Q5T4S7 5183 aa9.22□□□□□ -0.93
SF3B5-201ENST00000367569 HERVK_113P63121 156 aa9.22□□□□□ -0.93
SF3B5-201ENST00000367569 C9orf116Q5BN46 136 aaPredicted RBP9.22□□□□□ -0.93
SF3B5-201ENST00000367569 FAM19A3Q7Z5A8 133 aa9.22□□□□□ -0.93
SF3B5-201ENST00000367569 PACRGQ96M98 296 aaPredicted RBP9.22□□□□□ -0.93
SF3B5-201ENST00000367569 CST9LQ9H4G1 147 aa9.22□□□□□ -0.93
SF3B5-201ENST00000367569 TRGC2P03986 189 aa9.21□□□□□ -0.94
SF3B5-201ENST00000367569 SPINK8P0C7L1 97 aa9.21□□□□□ -0.94
SF3B5-201ENST00000367569 PMVKQ15126 192 aa9.21□□□□□ -0.94
SF3B5-201ENST00000367569 SERTAD4-AS1Q5TG53 156 aa9.21□□□□□ -0.94
SF3B5-201ENST00000367569 PRSS2P07478 247 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms