RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 A8MZ25 164 aa8.39□□□□□ -1.07
SYNE1-204ENST00000367248 ACYP1P07311 99 aa8.39□□□□□ -1.07
SYNE1-204ENST00000367248 SPANXDQ9BXN6 97 aa8.39□□□□□ -1.07
SYNE1-204ENST00000367248 HECTD1Q9ULT8 2610 aa8.39□□□□□ -1.07
SYNE1-204ENST00000367248 C1orf134Q5TEV5 83 aa8.39□□□□□ -1.07
SYNE1-204ENST00000367248 H3BT86 120 aa8.39□□□□□ -1.07
SYNE1-204ENST00000367248 TAX1BP3O14907 124 aa8.39□□□□□ -1.07
SYNE1-204ENST00000367248 TEN1Q86WV5 123 aa8.39□□□□□ -1.07
SYNE1-204ENST00000367248 GAS8-AS1O95177 125 aa8.39□□□□□ -1.07
SYNE1-204ENST00000367248 CEP350Q5VT06 3117 aa8.38□□□□□ -1.07
SYNE1-204ENST00000367248 C14orf132Q9NPU4 83 aa8.38□□□□□ -1.07
SYNE1-204ENST00000367248 LINC00959A0A1B0GUT2 108 aa8.38□□□□□ -1.07
SYNE1-204ENST00000367248 HCFC1P51610 2035 aa8.37□□□□□ -1.07
SYNE1-204ENST00000367248 LINC00308Q8TCZ7 52 aa8.37□□□□□ -1.07
SYNE1-204ENST00000367248 DNAH12Q6ZR08 3092 aa8.37□□□□□ -1.07
SYNE1-204ENST00000367248 IGKV3D-7A0A0C4DH55 119 aa8.37□□□□□ -1.07
SYNE1-204ENST00000367248 A0A0B4J2C4 111 aa8.37□□□□□ -1.07
SYNE1-204ENST00000367248 TRBV10-2A0A0K0K1G8 114 aa8.37□□□□□ -1.07
SYNE1-204ENST00000367248 MRPS36P82909 103 aaKnown RBP8.37□□□□□ -1.07
SYNE1-204ENST00000367248 Q8N2B8 174 aa8.36□□□□□ -1.07
SYNE1-204ENST00000367248 IGKV4-1P06312 121 aa8.36□□□□□ -1.07
SYNE1-204ENST00000367248 SLPIP03973 132 aa8.35□□□□□ -1.07
SYNE1-204ENST00000367248 RBM3P98179 157 aaKnown RBP8.35□□□□□ -1.07
SYNE1-204ENST00000367248 PLAC8L1A1L4L8 177 aa8.35□□□□□ -1.07
SYNE1-204ENST00000367248 COX8CQ7Z4L0 72 aa8.34□□□□□ -1.07
SYNE1-204ENST00000367248 SPANXB1Q9NS25 103 aaPredicted RBP8.34□□□□□ -1.07
SYNE1-204ENST00000367248 WFDC2Q14508 124 aa8.34□□□□□ -1.07
SYNE1-204ENST00000367248 MAPKAPK5-AS1Q8N8E1 139 aa8.34□□□□□ -1.07
SYNE1-204ENST00000367248 CHCHD7Q9BUK0 85 aa8.34□□□□□ -1.07
SYNE1-204ENST00000367248 FSHBP01225 129 aa8.34□□□□□ -1.07
SYNE1-204ENST00000367248 ANKRD17O75179 2603 aaKnown RBP8.34□□□□□ -1.08
SYNE1-204ENST00000367248 TMEM256-PLSCR3K7ERE1 68 aa8.33□□□□□ -1.08
SYNE1-204ENST00000367248 IGLV4-69A0A075B6H9 119 aa8.33□□□□□ -1.08
SYNE1-204ENST00000367248 LOC107984640A0A0U1RRK4 108 aa8.33□□□□□ -1.08
SYNE1-204ENST00000367248 PDE6GP18545 87 aa8.33□□□□□ -1.08
SYNE1-204ENST00000367248 CDC42SE2Q9NRR3 84 aa8.33□□□□□ -1.08
SYNE1-204ENST00000367248 A0A1B0GX51 115 aa8.33□□□□□ -1.08
SYNE1-204ENST00000367248 TP73-AS1Q9UF72 201 aa8.33□□□□□ -1.08
SYNE1-204ENST00000367248 RNASE8Q8TDE3 154 aaKnown RBP8.32□□□□□ -1.08
SYNE1-204ENST00000367248 ADAMTS20P59510 1910 aa8.32□□□□□ -1.08
SYNE1-204ENST00000367248 FHL3Q13643 280 aa8.31□□□□□ -1.08
SYNE1-204ENST00000367248 C6orf223Q8N319 242 aa8.31□□□□□ -1.08
SYNE1-204ENST00000367248 ATG2AQ2TAZ0 1938 aa8.31□□□□□ -1.08
SYNE1-204ENST00000367248 NHLRC4P0CG21 123 aaPredicted RBP8.31□□□□□ -1.08
SYNE1-204ENST00000367248 FHL2Q14192 279 aa8.3□□□□□ -1.08
SYNE1-204ENST00000367248 C6orf99Q4VX62 202 aa8.3□□□□□ -1.08
SYNE1-204ENST00000367248 WFDC10BQ8IUB3 73 aa8.3□□□□□ -1.08
SYNE1-204ENST00000367248 IGIPA6NJ69 53 aa8.3□□□□□ -1.08
SYNE1-204ENST00000367248 TIMM17BO60830 172 aa8.3□□□□□ -1.08
SYNE1-204ENST00000367248 BEAN1Q3B7T3 259 aa8.3□□□□□ -1.08
SYNE1-204ENST00000367248 SCXQ7RTU7 201 aa8.3□□□□□ -1.08
SYNE1-204ENST00000367248 MDFIQ99750 246 aa8.3□□□□□ -1.08
SYNE1-204ENST00000367248 MUC4Q99102 2169 aa8.3□□□□□ -1.08
SYNE1-204ENST00000367248 LINC00242Q5T6M2 205 aa8.3□□□□□ -1.08
SYNE1-204ENST00000367248 TCL1BO95988 128 aa8.3□□□□□ -1.08
SYNE1-204ENST00000367248 PTH2Q96A98 100 aa8.29□□□□□ -1.08
SYNE1-204ENST00000367248 PCNTO95613 3336 aa8.29□□□□□ -1.08
SYNE1-204ENST00000367248 CIRBP-AS1Q8TBR5 109 aa8.29□□□□□ -1.08
SYNE1-204ENST00000367248 C9orf116Q5BN46 136 aaPredicted RBP8.28□□□□□ -1.08
SYNE1-204ENST00000367248 USP17L23D6RBM5 183 aa8.28□□□□□ -1.08
SYNE1-204ENST00000367248 LINC01556Q5JQF7 62 aa8.28□□□□□ -1.08
SYNE1-204ENST00000367248 WFDC9Q8NEX5 89 aa8.28□□□□□ -1.08
SYNE1-204ENST00000367248 CYSRT1A8MQ03 144 aa8.28□□□□□ -1.08
SYNE1-204ENST00000367248 M0QXV9 152 aa8.28□□□□□ -1.08
SYNE1-204ENST00000367248 C5orf47Q569G3 176 aa8.28□□□□□ -1.08
SYNE1-204ENST00000367248 SBSPONQ8IVN8 264 aa8.28□□□□□ -1.08
SYNE1-204ENST00000367248 Q8IZM0 81 aa8.28□□□□□ -1.08
SYNE1-204ENST00000367248 MP68P56378 58 aa8.28□□□□□ -1.08
SYNE1-204ENST00000367248 COL4A2P08572 1712 aa8.27□□□□□ -1.09
SYNE1-204ENST00000367248 COX6A2Q02221 97 aa8.27□□□□□ -1.09
SYNE1-204ENST00000367248 CELA1Q9UNI1 258 aa8.27□□□□□ -1.09
SYNE1-204ENST00000367248 M0R378 163 aa8.27□□□□□ -1.09
SYNE1-204ENST00000367248 C1orf137Q5JT78 98 aa8.27□□□□□ -1.09
SYNE1-204ENST00000367248 C3orf84H3BNL1 204 aa8.26□□□□□ -1.09
SYNE1-204ENST00000367248 UNQ6190/PRO20217Q6UXQ8 127 aa8.26□□□□□ -1.09
SYNE1-204ENST00000367248 TRAV23DV6A0A075B6W5 121 aa8.26□□□□□ -1.09
SYNE1-204ENST00000367248 URB1-AS1Q96HZ7 61 aa8.26□□□□□ -1.09
SYNE1-204ENST00000367248 LINC00474Q9P2X8 69 aa8.26□□□□□ -1.09
SYNE1-204ENST00000367248 MUC7Q8TAX7 377 aa8.25□□□□□ -1.09
SYNE1-204ENST00000367248 CASC2Q6XLA1 102 aa8.25□□□□□ -1.09
SYNE1-204ENST00000367248 EML5Q05BV3 1969 aa8.25□□□□□ -1.09
SYNE1-204ENST00000367248 LINC00310P59036 64 aa8.25□□□□□ -1.09
SYNE1-204ENST00000367248 TRIAP1O43715 76 aa8.24□□□□□ -1.09
SYNE1-204ENST00000367248 IGLV4-60A0A075B6I1 120 aa8.24□□□□□ -1.09
SYNE1-204ENST00000367248 LINC00694P0DN24 101 aa8.24□□□□□ -1.09
SYNE1-204ENST00000367248 EGFEM1PQ0D2K5 195 aa8.24□□□□□ -1.09
SYNE1-204ENST00000367248 POM121L12Q8N7R1 296 aa8.24□□□□□ -1.09
SYNE1-204ENST00000367248 TRBV30A0A0K0K1B3 111 aa8.23□□□□□ -1.09
SYNE1-204ENST00000367248 ZNF706Q9Y5V0 76 aaPredicted RBP8.23□□□□□ -1.09
SYNE1-204ENST00000367248 SMIM1B2RUZ4 78 aa8.23□□□□□ -1.09
SYNE1-204ENST00000367248 BPY2O14599 106 aa8.23□□□□□ -1.09
SYNE1-204ENST00000367248 Q6ZQY7 126 aa8.22□□□□□ -1.09
SYNE1-204ENST00000367248 LYPD5Q6UWN5 251 aa8.22□□□□□ -1.09
SYNE1-204ENST00000367248 COX17Q14061 63 aa8.22□□□□□ -1.09
SYNE1-204ENST00000367248 CSDC2Q9Y534 153 aaKnown RBP8.22□□□□□ -1.09
SYNE1-204ENST00000367248 Q6ZSN1 163 aa8.22□□□□□ -1.09
SYNE1-204ENST00000367248 AGRNO00468 2067 aa8.22□□□□□ -1.09
SYNE1-204ENST00000367248 XGP55808 180 aa8.22□□□□□ -1.09
SYNE1-204ENST00000367248 USP24Q9UPU5 2620 aa8.21□□□□□ -1.1
SYNE1-204ENST00000367248 MGAM2Q2M2H8 2515 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms