RNA–Protein interactions for RNA: ENST00000366286.6

YBX3-203, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-203ENST00000366286 COMMD7Q86VX2 200 aa6.54□□□□□ -1.36
YBX3-203ENST00000366286 STPG4Q8N801 248 aa6.54□□□□□ -1.36
YBX3-203ENST00000366286 Q8N8P6 123 aa6.54□□□□□ -1.36
YBX3-203ENST00000366286 CTDSP1Q9GZU7 261 aa6.54□□□□□ -1.36
YBX3-203ENST00000366286 PKIGQ9Y2B9 76 aa6.54□□□□□ -1.36
YBX3-203ENST00000366286 APOMO95445 188 aa6.53□□□□□ -1.36
YBX3-203ENST00000366286 SPAG11BQ08648 103 aa6.53□□□□□ -1.36
YBX3-203ENST00000366286 CAMK2N2Q96S95 79 aa6.53□□□□□ -1.36
YBX3-203ENST00000366286 SEC11CQ9BY50 192 aa6.53□□□□□ -1.36
YBX3-203ENST00000366286 PYGO1Q9Y3Y4 419 aa6.53□□□□□ -1.36
YBX3-203ENST00000366286 IGHV3OR16-9A0A0B4J2B5 98 aa6.52□□□□□ -1.37
YBX3-203ENST00000366286 LCE2DQ5TA82 110 aaPredicted RBP6.52□□□□□ -1.37
YBX3-203ENST00000366286 C2orf66Q6UXQ4 117 aa6.52□□□□□ -1.37
YBX3-203ENST00000366286 OR10D4PQ8NGN7 298 aa6.52□□□□□ -1.37
YBX3-203ENST00000366286 C7orf33Q8WU49 177 aa6.52□□□□□ -1.37
YBX3-203ENST00000366286 ORAOV1Q8WV07 137 aa6.52□□□□□ -1.37
YBX3-203ENST00000366286 TMEM141Q96I45 108 aa6.52□□□□□ -1.37
YBX3-203ENST00000366286 C2orf48Q96LS8 159 aa6.52□□□□□ -1.37
YBX3-203ENST00000366286 LINC00474Q9P2X8 69 aa6.52□□□□□ -1.37
YBX3-203ENST00000366286 CYSLTR1Q9Y271 337 aa6.52□□□□□ -1.37
YBX3-203ENST00000366286 TRAV9-1A0A075B6T8 112 aa6.51□□□□□ -1.37
YBX3-203ENST00000366286 TGIF2-C20orf24A0A0A6YYL0 155 aa6.51□□□□□ -1.37
YBX3-203ENST00000366286 LOC107984640A0A0U1RRK4 108 aa6.51□□□□□ -1.37
YBX3-203ENST00000366286 PTTG1IPP53801 180 aa6.51□□□□□ -1.37
YBX3-203ENST00000366286 KIAA1644Q3SXP7 199 aa6.51□□□□□ -1.37
YBX3-203ENST00000366286 ORMDL2Q53FV1 153 aa6.51□□□□□ -1.37
YBX3-203ENST00000366286 TEX43Q6ZNM6 134 aa6.51□□□□□ -1.37
YBX3-203ENST00000366286 NXT2Q9NPJ8 142 aaKnown RBP6.51□□□□□ -1.37
YBX3-203ENST00000366286 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.5□□□□□ -1.37
YBX3-203ENST00000366286 OXTP01178 125 aa6.5□□□□□ -1.37
YBX3-203ENST00000366286 GAGE2BQ13066 116 aa6.5□□□□□ -1.37
YBX3-203ENST00000366286 LINC00242Q5T6M2 205 aa6.5□□□□□ -1.37
YBX3-203ENST00000366286 ZC2HC1BQ5TFG8 222 aa6.5□□□□□ -1.37
YBX3-203ENST00000366286 LINC00173Q6ZV60 143 aa6.5□□□□□ -1.37
YBX3-203ENST00000366286 FAT3Q8TDW7 4589 aa6.49□□□□□ -1.37
YBX3-203ENST00000366286 A0A0J9YXV3 536 aa6.49□□□□□ -1.37
YBX3-203ENST00000366286 K7EMI3 77 aa6.49□□□□□ -1.37
YBX3-203ENST00000366286 S100PP25815 95 aa6.49□□□□□ -1.37
YBX3-203ENST00000366286 UBE2D1P51668 147 aa6.49□□□□□ -1.37
YBX3-203ENST00000366286 PRR3P79522 188 aaKnown RBP6.49□□□□□ -1.37
YBX3-203ENST00000366286 RPL18AQ02543 176 aaKnown RBP6.49□□□□□ -1.37
YBX3-203ENST00000366286 C10orf91Q5T1B1 145 aa6.49□□□□□ -1.37
YBX3-203ENST00000366286 Q6ZN92 141 aa6.49□□□□□ -1.37
YBX3-203ENST00000366286 C2orf88Q9BSF0 95 aa6.49□□□□□ -1.37
YBX3-203ENST00000366286 LRP1Q07954 4544 aaKnown RBP6.49□□□□□ -1.37
YBX3-203ENST00000366286 A0A087WZ39 114 aa6.48□□□□□ -1.37
YBX3-203ENST00000366286 IGIPA6NJ69 53 aa6.48□□□□□ -1.37
YBX3-203ENST00000366286 RNF151Q2KHN1 245 aa6.48□□□□□ -1.37
YBX3-203ENST00000366286 AMELXQ99217 191 aa6.48□□□□□ -1.37
YBX3-203ENST00000366286 CARHSP1Q9Y2V2 147 aaKnown RBP6.48□□□□□ -1.37
YBX3-203ENST00000366286 F8WDY8 70 aa6.47□□□□□ -1.37
YBX3-203ENST00000366286 NDUFA1O15239 70 aa6.47□□□□□ -1.37
YBX3-203ENST00000366286 NPSP0C0P6 89 aa6.47□□□□□ -1.37
YBX3-203ENST00000366286 RHEBQ15382 184 aa6.47□□□□□ -1.37
YBX3-203ENST00000366286 C10orf25Q5T742 122 aa6.47□□□□□ -1.37
YBX3-203ENST00000366286 GNB1LQ9BYB4 327 aa6.47□□□□□ -1.37
YBX3-203ENST00000366286 RPS10P5Q9NQ39 176 aa6.47□□□□□ -1.37
YBX3-203ENST00000366286 MRPL35Q9NZE8 188 aaKnown RBP6.47□□□□□ -1.37
YBX3-203ENST00000366286 KIAA0087Q14695 138 aa6.46□□□□□ -1.38
YBX3-203ENST00000366286 UNQ6190/PRO20217Q6UXQ8 127 aa6.46□□□□□ -1.38
YBX3-203ENST00000366286 TOMM6Q96B49 74 aa6.46□□□□□ -1.38
YBX3-203ENST00000366286 TIMM17AQ99595 171 aa6.46□□□□□ -1.38
YBX3-203ENST00000366286 ALKBH7Q9BT30 221 aaPredicted RBP6.46□□□□□ -1.38
YBX3-203ENST00000366286 VCX2Q9H322 139 aa6.46□□□□□ -1.38
YBX3-203ENST00000366286 C6orf48Q9UBA6 75 aa6.46□□□□□ -1.38
YBX3-203ENST00000366286 A0A1W2PNN7 141 aa6.45□□□□□ -1.38
YBX3-203ENST00000366286 MT-ND6P03923 174 aa6.45□□□□□ -1.38
YBX3-203ENST00000366286 COX19Q49B96 90 aa6.45□□□□□ -1.38
YBX3-203ENST00000366286 MRPL18Q9H0U6 180 aaKnown RBP6.45□□□□□ -1.38
YBX3-203ENST00000366286 LINC01546A6NGU7 62 aa6.44□□□□□ -1.38
YBX3-203ENST00000366286 G0S2P27469 103 aa6.44□□□□□ -1.38
YBX3-203ENST00000366286 C9orf116Q5BN46 136 aaPredicted RBP6.44□□□□□ -1.38
YBX3-203ENST00000366286 PAPPA-AS1Q5QFB9 102 aa6.44□□□□□ -1.38
YBX3-203ENST00000366286 C2orf82Q6UX34 121 aa6.44□□□□□ -1.38
YBX3-203ENST00000366286 Q6ZRP5 223 aa6.44□□□□□ -1.38
YBX3-203ENST00000366286 FAM19A3Q7Z5A8 133 aa6.44□□□□□ -1.38
YBX3-203ENST00000366286 LINC01561Q8N1V8 128 aa6.44□□□□□ -1.38
YBX3-203ENST00000366286 TLX1NBP0CAT3 122 aa6.43□□□□□ -1.38
YBX3-203ENST00000366286 MT1HL1P0DM35 61 aa6.43□□□□□ -1.38
YBX3-203ENST00000366286 FABP9Q0Z7S8 132 aa6.43□□□□□ -1.38
YBX3-203ENST00000366286 ERASQ7Z444 233 aa6.43□□□□□ -1.38
YBX3-203ENST00000366286 SCGB3A1Q96QR1 104 aa6.43□□□□□ -1.38
YBX3-203ENST00000366286 TRBV30A0A0K0K1B3 111 aa6.42□□□□□ -1.38
YBX3-203ENST00000366286 FAM168BA1KXE4 195 aa6.42□□□□□ -1.38
YBX3-203ENST00000366286 APOC3P02656 99 aa6.42□□□□□ -1.38
YBX3-203ENST00000366286 HERVK_113P63121 156 aa6.42□□□□□ -1.38
YBX3-203ENST00000366286 SEC11AP67812 179 aa6.42□□□□□ -1.38
YBX3-203ENST00000366286 FA2HQ7L5A8 372 aa6.42□□□□□ -1.38
YBX3-203ENST00000366286 PHF5AQ7RTV0 110 aaKnown RBP6.42□□□□□ -1.38
YBX3-203ENST00000366286 GEMIN7Q9H840 131 aaKnown RBP6.42□□□□□ -1.38
YBX3-203ENST00000366286 TOMM7Q9P0U1 55 aa6.42□□□□□ -1.38
YBX3-203ENST00000366286 PRSS2P07478 247 aa6.41□□□□□ -1.38
YBX3-203ENST00000366286 GAGE2EQ4V326 116 aa6.41□□□□□ -1.38
YBX3-203ENST00000366286 FAM19A5Q7Z5A7 132 aaPredicted RBP6.41□□□□□ -1.38
YBX3-203ENST00000366286 Q8IZM0 81 aa6.41□□□□□ -1.38
YBX3-203ENST00000366286 PACRGQ96M98 296 aaPredicted RBP6.41□□□□□ -1.38
YBX3-203ENST00000366286 SMCO4Q9NRQ5 59 aa6.41□□□□□ -1.38
YBX3-203ENST00000366286 GAGE2DQ9UEU5 116 aa6.41□□□□□ -1.38
YBX3-203ENST00000366286 CDKN2A-AS1Q9UH64 79 aa6.41□□□□□ -1.38
YBX3-203ENST00000366286 LINC01549A6NIU2 74 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 137.6 ms