RNA–Protein interactions for RNA: ENST00000360495.9

CCDC144A-203, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-203ENST00000360495 SMIM1B2RUZ4 78 aa9.79□□□□□ -0.84
CCDC144A-203ENST00000360495 TMEM254Q8TBM7 123 aa9.79□□□□□ -0.84
CCDC144A-203ENST00000360495 ZNF843Q8N446 348 aa9.78□□□□□ -0.84
CCDC144A-203ENST00000360495 PCDH15Q96QU1 1955 aa9.78□□□□□ -0.84
CCDC144A-203ENST00000360495 DEFB131BA0A096LNP1 70 aa9.78□□□□□ -0.84
CCDC144A-203ENST00000360495 BEAN1Q3B7T3 259 aa9.78□□□□□ -0.84
CCDC144A-203ENST00000360495 MUC7Q8TAX7 377 aa9.78□□□□□ -0.84
CCDC144A-203ENST00000360495 A0A1W2PNU3 283 aaPredicted RBP9.78□□□□□ -0.84
CCDC144A-203ENST00000360495 PRM2P04554 102 aa9.78□□□□□ -0.84
CCDC144A-203ENST00000360495 KIAA1549Q9HCM3 1950 aa9.78□□□□□ -0.84
CCDC144A-203ENST00000360495 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.77□□□□□ -0.84
CCDC144A-203ENST00000360495 NUP210Q8TEM1 1887 aaPredicted RBP9.77□□□□□ -0.85
CCDC144A-203ENST00000360495 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.77□□□□□ -0.85
CCDC144A-203ENST00000360495 C2CD3Q4AC94 2353 aa9.77□□□□□ -0.85
CCDC144A-203ENST00000360495 LINC00846Q9NV44 126 aa9.76□□□□□ -0.85
CCDC144A-203ENST00000360495 C10orf99Q6UWK7 81 aa9.76□□□□□ -0.85
CCDC144A-203ENST00000360495 FAM208BQ5VWN6 2430 aa9.76□□□□□ -0.85
CCDC144A-203ENST00000360495 ADAMTS9Q9P2N4 1935 aa9.75□□□□□ -0.85
CCDC144A-203ENST00000360495 C1orf137Q5JT78 98 aa9.75□□□□□ -0.85
CCDC144A-203ENST00000360495 CYSRT1A8MQ03 144 aa9.75□□□□□ -0.85
CCDC144A-203ENST00000360495 FSTL3O95633 263 aa9.75□□□□□ -0.85
CCDC144A-203ENST00000360495 HILS1P60008 231 aa9.75□□□□□ -0.85
CCDC144A-203ENST00000360495 ZNF580Q9UK33 172 aa9.75□□□□□ -0.85
CCDC144A-203ENST00000360495 TANC2Q9HCD6 1990 aa9.75□□□□□ -0.85
CCDC144A-203ENST00000360495 ESRGQ1W209 222 aa9.75□□□□□ -0.85
CCDC144A-203ENST00000360495 Q6YL49 198 aa9.75□□□□□ -0.85
CCDC144A-203ENST00000360495 ARHGAP32A7KAX9 2087 aa9.75□□□□□ -0.85
CCDC144A-203ENST00000360495 LINC01547P58512 204 aaPredicted RBP9.74□□□□□ -0.85
CCDC144A-203ENST00000360495 COX6A2Q02221 97 aa9.74□□□□□ -0.85
CCDC144A-203ENST00000360495 PSMG3-AS1Q96PY0 264 aa9.74□□□□□ -0.85
CCDC144A-203ENST00000360495 ALPK3Q96L96 1907 aa9.74□□□□□ -0.85
CCDC144A-203ENST00000360495 TRBV10-3A0A0K0K1G6 114 aa9.73□□□□□ -0.85
CCDC144A-203ENST00000360495 LINC00482Q8N8I6 264 aa9.73□□□□□ -0.85
CCDC144A-203ENST00000360495 ZNF706Q9Y5V0 76 aaPredicted RBP9.73□□□□□ -0.85
CCDC144A-203ENST00000360495 PRR3P79522 188 aaKnown RBP9.73□□□□□ -0.85
CCDC144A-203ENST00000360495 LELP1Q5T871 98 aa9.73□□□□□ -0.85
CCDC144A-203ENST00000360495 IGLV9-49A0A0B4J1Y8 123 aa9.73□□□□□ -0.85
CCDC144A-203ENST00000360495 Q6ZVQ6 151 aa9.72□□□□□ -0.85
CCDC144A-203ENST00000360495 Q8N6K4 173 aa9.72□□□□□ -0.85
CCDC144A-203ENST00000360495 PCOTHQ58A44 107 aa9.72□□□□□ -0.85
CCDC144A-203ENST00000360495 UNQ6190/PRO20217Q6UXQ8 127 aa9.72□□□□□ -0.85
CCDC144A-203ENST00000360495 LINC00575Q6W349 94 aa9.72□□□□□ -0.85
CCDC144A-203ENST00000360495 CHCHD7Q9BUK0 85 aa9.72□□□□□ -0.85
CCDC144A-203ENST00000360495 PCNX3Q9H6A9 2034 aa9.71□□□□□ -0.85
CCDC144A-203ENST00000360495 C4orf26Q17RF5 130 aa9.71□□□□□ -0.85
CCDC144A-203ENST00000360495 C9orf116Q5BN46 136 aaPredicted RBP9.71□□□□□ -0.85
CCDC144A-203ENST00000360495 SPG11Q96JI7 2443 aa9.71□□□□□ -0.85
CCDC144A-203ENST00000360495 ANKHD1Q8IWZ3 2542 aaKnown RBP9.71□□□□□ -0.85
CCDC144A-203ENST00000360495 MRGPRG-AS1Q2M3A8 158 aa9.71□□□□□ -0.86
CCDC144A-203ENST00000360495 CRYGAP11844 174 aa9.71□□□□□ -0.86
CCDC144A-203ENST00000360495 Q8NA96 180 aa9.7□□□□□ -0.86
CCDC144A-203ENST00000360495 PRORYQ9H606 182 aa9.7□□□□□ -0.86
CCDC144A-203ENST00000360495 AMELXQ99217 191 aa9.7□□□□□ -0.86
CCDC144A-203ENST00000360495 IGLV2-18A0A075B6J9 118 aa9.69□□□□□ -0.86
CCDC144A-203ENST00000360495 C10orf25Q5T742 122 aa9.69□□□□□ -0.86
CCDC144A-203ENST00000360495 H0Y9P7 68 aa9.69□□□□□ -0.86
CCDC144A-203ENST00000360495 ZNF106Q9H2Y7 1883 aaKnown RBP9.69□□□□□ -0.86
CCDC144A-203ENST00000360495 HCFC1P51610 2035 aa9.69□□□□□ -0.86
CCDC144A-203ENST00000360495 PLAC8L1A1L4L8 177 aa9.68□□□□□ -0.86
CCDC144A-203ENST00000360495 KPRPQ5T749 579 aaPredicted RBP9.67□□□□□ -0.86
CCDC144A-203ENST00000360495 RPS28P62857 69 aaKnown RBP9.67□□□□□ -0.86
CCDC144A-203ENST00000360495 C2orf16Q68DN1 1984 aa9.66□□□□□ -0.86
CCDC144A-203ENST00000360495 EGFEM1PQ0D2K5 195 aa9.66□□□□□ -0.86
CCDC144A-203ENST00000360495 SMCPP49901 116 aaPredicted RBP9.65□□□□□ -0.86
CCDC144A-203ENST00000360495 CSPG4Q6UVK1 2322 aa9.65□□□□□ -0.86
CCDC144A-203ENST00000360495 TMEM131Q92545 1883 aa9.64□□□□□ -0.87
CCDC144A-203ENST00000360495 hDV103S1A0JD37 113 aa9.64□□□□□ -0.87
CCDC144A-203ENST00000360495 C7orf33Q8WU49 177 aa9.64□□□□□ -0.87
CCDC144A-203ENST00000360495 LIMD2Q9BT23 127 aa9.64□□□□□ -0.87
CCDC144A-203ENST00000360495 COX8CQ7Z4L0 72 aa9.64□□□□□ -0.87
CCDC144A-203ENST00000360495 IGLV4-60A0A075B6I1 120 aa9.64□□□□□ -0.87
CCDC144A-203ENST00000360495 CXCL6P80162 114 aa9.64□□□□□ -0.87
CCDC144A-203ENST00000360495 SERTAD4-AS1Q5TG53 156 aa9.64□□□□□ -0.87
CCDC144A-203ENST00000360495 IGHV6-1A0A0B4J1U7 121 aa9.64□□□□□ -0.87
CCDC144A-203ENST00000360495 IGLV1-40P01703 118 aa9.63□□□□□ -0.87
CCDC144A-203ENST00000360495 TECTAO75443 2155 aa9.63□□□□□ -0.87
CCDC144A-203ENST00000360495 ZNF702PQ9H963 129 aa9.63□□□□□ -0.87
CCDC144A-203ENST00000360495 HCG22E2RYF7 251 aa9.63□□□□□ -0.87
CCDC144A-203ENST00000360495 C18orf65Q6ZTR6 163 aa9.63□□□□□ -0.87
CCDC144A-203ENST00000360495 HIVEP2P31629 2446 aa9.62□□□□□ -0.87
CCDC144A-203ENST00000360495 IL17DQ8TAD2 202 aa9.62□□□□□ -0.87
CCDC144A-203ENST00000360495 C19orf84I3L1E1 186 aa9.62□□□□□ -0.87
CCDC144A-203ENST00000360495 TRAV10A0A0B4J240 114 aa9.61□□□□□ -0.87
CCDC144A-203ENST00000360495 A0A087WSZ3 146 aa9.61□□□□□ -0.87
CCDC144A-203ENST00000360495 LINC00337Q8N6G1 96 aa9.61□□□□□ -0.87
CCDC144A-203ENST00000360495 PRO0461Q9UI25 63 aa9.61□□□□□ -0.87
CCDC144A-203ENST00000360495 DEFB116Q30KQ4 102 aa9.61□□□□□ -0.87
CCDC144A-203ENST00000360495 KIF26AQ9ULI4 1882 aaPredicted RBP9.61□□□□□ -0.87
CCDC144A-203ENST00000360495 C11orf71Q6IPW1 123 aa9.6□□□□□ -0.87
CCDC144A-203ENST00000360495 OTOGLQ3ZCN5 2332 aa9.6□□□□□ -0.87
CCDC144A-203ENST00000360495 EDN2P20800 178 aa9.6□□□□□ -0.87
CCDC144A-203ENST00000360495 REG3GQ6UW15 175 aa9.6□□□□□ -0.87
CCDC144A-203ENST00000360495 Q9UF83 564 aa9.6□□□□□ -0.87
CCDC144A-203ENST00000360495 ACACBO00763 2458 aa9.6□□□□□ -0.87
CCDC144A-203ENST00000360495 A8MTW9 85 aa9.59□□□□□ -0.87
CCDC144A-203ENST00000360495 EML5Q05BV3 1969 aa9.59□□□□□ -0.87
CCDC144A-203ENST00000360495 NUP210LQ5VU65 1888 aa9.59□□□□□ -0.87
CCDC144A-203ENST00000360495 KIAA1549LQ6ZVL6 1849 aa9.59□□□□□ -0.87
CCDC144A-203ENST00000360495 SONP18583 2426 aaKnown RBP9.59□□□□□ -0.87
CCDC144A-203ENST00000360495 SPINK1P00995 79 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms