RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 CHCHD5Q9BSY4 110 aa3.68□□□□□ -1.82
ATXN3-202ENST00000359366 LAMTOR3Q9UHA4 124 aa3.68□□□□□ -1.82
ATXN3-202ENST00000359366 PKIGQ9Y2B9 76 aa3.68□□□□□ -1.82
ATXN3-202ENST00000359366 PYGO1Q9Y3Y4 419 aa3.68□□□□□ -1.82
ATXN3-202ENST00000359366 FAM236AA0A1B0GUQ0 79 aa3.67□□□□□ -1.82
ATXN3-202ENST00000359366 FAM236BA0A1B0GV22 79 aa3.67□□□□□ -1.82
ATXN3-202ENST00000359366 A8MTW9 85 aa3.67□□□□□ -1.82
ATXN3-202ENST00000359366 ATOX1O00244 68 aa3.67□□□□□ -1.82
ATXN3-202ENST00000359366 HBDP02042 147 aa3.67□□□□□ -1.82
ATXN3-202ENST00000359366 SUMO2P61956 95 aaKnown RBP3.67□□□□□ -1.82
ATXN3-202ENST00000359366 KRTAP24-1Q3LI83 254 aa3.67□□□□□ -1.82
ATXN3-202ENST00000359366 ZC2HC1BQ5TFG8 222 aa3.67□□□□□ -1.82
ATXN3-202ENST00000359366 SMIM2Q9BVW6 85 aa3.67□□□□□ -1.82
ATXN3-202ENST00000359366 TRGV11A0A075B6L2 103 aa3.67□□□□□ -1.82
ATXN3-202ENST00000359366 MYMXA0A1B0GTQ4 84 aa3.67□□□□□ -1.82
ATXN3-202ENST00000359366 MED14OSP0DP75 135 aa3.67□□□□□ -1.82
ATXN3-202ENST00000359366 CXCL5P42830 114 aa3.67□□□□□ -1.82
ATXN3-202ENST00000359366 UBE2D3P61077 147 aa3.67□□□□□ -1.82
ATXN3-202ENST00000359366 UBE2D2P62837 147 aa3.67□□□□□ -1.82
ATXN3-202ENST00000359366 BEAN1Q3B7T3 259 aa3.67□□□□□ -1.82
ATXN3-202ENST00000359366 Q8N8P6 123 aa3.67□□□□□ -1.82
ATXN3-202ENST00000359366 C11orf72Q8NBR9 251 aa3.67□□□□□ -1.82
ATXN3-202ENST00000359366 DKK2Q9UBU2 259 aa3.67□□□□□ -1.82
ATXN3-202ENST00000359366 TRGV1A0A0A0MS02 117 aa3.66□□□□□ -1.82
ATXN3-202ENST00000359366 FAM236DA0A1B0GTK5 79 aa3.66□□□□□ -1.82
ATXN3-202ENST00000359366 FAM236CP0DP71 79 aa3.66□□□□□ -1.82
ATXN3-202ENST00000359366 RPL39P62891 51 aaKnown RBP3.66□□□□□ -1.82
ATXN3-202ENST00000359366 LAGE3Q14657 143 aa3.66□□□□□ -1.82
ATXN3-202ENST00000359366 Q6ZTI0 123 aa3.66□□□□□ -1.82
ATXN3-202ENST00000359366 FAM19A1Q7Z5A9 133 aa3.66□□□□□ -1.82
ATXN3-202ENST00000359366 IFI27L1Q96BM0 104 aa3.66□□□□□ -1.82
ATXN3-202ENST00000359366 NXT2Q9NPJ8 142 aaKnown RBP3.66□□□□□ -1.82
ATXN3-202ENST00000359366 TRBV25-1A0A075B6N4 114 aa3.66□□□□□ -1.82
ATXN3-202ENST00000359366 SDHAF1A6NFY7 115 aa3.66□□□□□ -1.82
ATXN3-202ENST00000359366 M0QY20 66 aa3.66□□□□□ -1.82
ATXN3-202ENST00000359366 DEFB4AO15263 64 aa3.66□□□□□ -1.82
ATXN3-202ENST00000359366 FCER1GP30273 86 aa3.66□□□□□ -1.82
ATXN3-202ENST00000359366 POM121L12Q8N7R1 296 aa3.66□□□□□ -1.82
ATXN3-202ENST00000359366 NOP10Q9NPE3 64 aaKnown RBP3.66□□□□□ -1.82
ATXN3-202ENST00000359366 IGHV3-38A0A0C4DH36 116 aa3.65□□□□□ -1.82
ATXN3-202ENST00000359366 H7C1H1 209 aa3.65□□□□□ -1.82
ATXN3-202ENST00000359366 K7ERJ3 54 aa3.65□□□□□ -1.82
ATXN3-202ENST00000359366 IGKCP01834 107 aa3.65□□□□□ -1.82
ATXN3-202ENST00000359366 PRSS1P07477 247 aa3.65□□□□□ -1.82
ATXN3-202ENST00000359366 TMEM170BQ5T4T1 132 aa3.65□□□□□ -1.82
ATXN3-202ENST00000359366 OPRPNQ99935 248 aaPredicted RBP3.65□□□□□ -1.82
ATXN3-202ENST00000359366 PSMB2P49721 201 aa3.65□□□□□ -1.83
ATXN3-202ENST00000359366 SLC25A20O43772 301 aa3.64□□□□□ -1.83
ATXN3-202ENST00000359366 GTSCR1Q86UQ5 136 aa3.64□□□□□ -1.83
ATXN3-202ENST00000359366 CSNK1G2-AS1Q8NCQ2 148 aa3.64□□□□□ -1.83
ATXN3-202ENST00000359366 TTTY13Q9BZ97 58 aa3.64□□□□□ -1.83
ATXN3-202ENST00000359366 PLAC8L1A1L4L8 177 aa3.64□□□□□ -1.83
ATXN3-202ENST00000359366 LINC01546A6NGU7 62 aa3.64□□□□□ -1.83
ATXN3-202ENST00000359366 POLR2KP53803 58 aaKnown RBP3.64□□□□□ -1.83
ATXN3-202ENST00000359366 PMAIP1Q13794 54 aa3.64□□□□□ -1.83
ATXN3-202ENST00000359366 LINC01620Q4KN68 170 aa3.64□□□□□ -1.83
ATXN3-202ENST00000359366 RNASE13Q5GAN3 156 aaKnown RBP3.64□□□□□ -1.83
ATXN3-202ENST00000359366 CEMP1Q6PRD7 247 aaPredicted RBP3.64□□□□□ -1.83
ATXN3-202ENST00000359366 C2orf66Q6UXQ4 117 aa3.64□□□□□ -1.83
ATXN3-202ENST00000359366 ZFP2Q6ZN57 461 aa3.64□□□□□ -1.83
ATXN3-202ENST00000359366 PCP2Q8IVA1 136 aa3.64□□□□□ -1.83
ATXN3-202ENST00000359366 SCGB3A1Q96QR1 104 aa3.64□□□□□ -1.83
ATXN3-202ENST00000359366 HIST1H4GQ99525 98 aa3.64□□□□□ -1.83
ATXN3-202ENST00000359366 LOC100131303A0A0U1RQF7 123 aa3.63□□□□□ -1.83
ATXN3-202ENST00000359366 EPM2AB3EWF7 344 aa3.63□□□□□ -1.83
ATXN3-202ENST00000359366 DEFB135Q30KP9 77 aa3.63□□□□□ -1.83
ATXN3-202ENST00000359366 C9orf66Q5T8R8 295 aa3.63□□□□□ -1.83
ATXN3-202ENST00000359366 DGAT2L7PQ6IED9 249 aa3.63□□□□□ -1.83
ATXN3-202ENST00000359366 MRPL35Q9NZE8 188 aaKnown RBP3.63□□□□□ -1.83
ATXN3-202ENST00000359366 DNAH3Q8TD57 4116 aa3.63□□□□□ -1.83
ATXN3-202ENST00000359366 TSHBP01222 138 aa3.63□□□□□ -1.83
ATXN3-202ENST00000359366 DEFB130BP0DP73 79 aa3.63□□□□□ -1.83
ATXN3-202ENST00000359366 DEFB130AP0DP74 79 aa3.63□□□□□ -1.83
ATXN3-202ENST00000359366 MRPS36P82909 103 aaKnown RBP3.63□□□□□ -1.83
ATXN3-202ENST00000359366 LINC00643Q86TS7 51 aa3.63□□□□□ -1.83
ATXN3-202ENST00000359366 C3orf56Q8N813 242 aa3.63□□□□□ -1.83
ATXN3-202ENST00000359366 RETNQ9HD89 108 aa3.63□□□□□ -1.83
ATXN3-202ENST00000359366 SERP1Q9Y6X1 66 aa3.63□□□□□ -1.83
ATXN3-202ENST00000359366 TRGV2A0A075B6R0 118 aa3.62□□□□□ -1.83
ATXN3-202ENST00000359366 SMIM26A0A096LP01 95 aa3.62□□□□□ -1.83
ATXN3-202ENST00000359366 IGKV2D-26A0A0A0MRZ7 120 aa3.62□□□□□ -1.83
ATXN3-202ENST00000359366 LOC107984156A0A0G2JMH3 177 aa3.62□□□□□ -1.83
ATXN3-202ENST00000359366 VCYO14598 125 aa3.62□□□□□ -1.83
ATXN3-202ENST00000359366 PRB2P02812 416 aaPredicted RBP3.62□□□□□ -1.83
ATXN3-202ENST00000359366 NPC2P61916 151 aa3.62□□□□□ -1.83
ATXN3-202ENST00000359366 ARL17AQ8IVW1 177 aa3.62□□□□□ -1.83
ATXN3-202ENST00000359366 NEXN-AS1Q8NBZ9 246 aa3.62□□□□□ -1.83
ATXN3-202ENST00000359366 TMEM263Q8WUH6 116 aaKnown RBP3.62□□□□□ -1.83
ATXN3-202ENST00000359366 TOMM6Q96B49 74 aa3.62□□□□□ -1.83
ATXN3-202ENST00000359366 TRBV7-3A0A075B6L6 115 aa3.62□□□□□ -1.83
ATXN3-202ENST00000359366 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.62□□□□□ -1.83
ATXN3-202ENST00000359366 TRBV27A0A0K0K1C4 114 aa3.62□□□□□ -1.83
ATXN3-202ENST00000359366 IGKV2-29A2NJV5 120 aaPredicted RBP3.62□□□□□ -1.83
ATXN3-202ENST00000359366 UBE2D1P51668 147 aa3.62□□□□□ -1.83
ATXN3-202ENST00000359366 KRTAP10-11P60412 298 aa3.62□□□□□ -1.83
ATXN3-202ENST00000359366 ORMDL2Q53FV1 153 aa3.62□□□□□ -1.83
ATXN3-202ENST00000359366 DEFB121Q5J5C9 76 aa3.62□□□□□ -1.83
ATXN3-202ENST00000359366 IL17DQ8TAD2 202 aa3.62□□□□□ -1.83
ATXN3-202ENST00000359366 C2orf48Q96LS8 159 aa3.62□□□□□ -1.83
ATXN3-202ENST00000359366 KRTAP9-7A8MTY7 169 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms