RNA–Protein interactions for RNA: ENST00000357896.7

IFT20-202, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best) BASIC

Gene IFT20, Length 974 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-202ENST00000357896 NUPR1O60356 82 aa9.29□□□□□ -0.92
IFT20-202ENST00000357896 PPP1R17O96001 155 aa9.29□□□□□ -0.92
IFT20-202ENST00000357896 Q6ZUT4 128 aa9.29□□□□□ -0.92
IFT20-202ENST00000357896 OCC1Q8TAD7 63 aa9.29□□□□□ -0.92
IFT20-202ENST00000357896 TMEM191AQ9H0A3 160 aa9.29□□□□□ -0.92
IFT20-202ENST00000357896 K7EN84 100 aa9.28□□□□□ -0.92
IFT20-202ENST00000357896 MUC17Q685J3 4493 aa9.28□□□□□ -0.92
IFT20-202ENST00000357896 TRBV30A0A0K0K1B3 111 aa9.27□□□□□ -0.93
IFT20-202ENST00000357896 NDUFC2-KCTD14E9PQ53 114 aa9.27□□□□□ -0.93
IFT20-202ENST00000357896 GATCO43716 136 aaKnown RBP9.27□□□□□ -0.93
IFT20-202ENST00000357896 RAB4AP20338 218 aa9.27□□□□□ -0.93
IFT20-202ENST00000357896 FSIP2Q5CZC0 6907 aa9.27□□□□□ -0.93
IFT20-202ENST00000357896 HMSDA8MTL9 139 aa9.26□□□□□ -0.93
IFT20-202ENST00000357896 SMLR1H3BR10 107 aa9.26□□□□□ -0.93
IFT20-202ENST00000357896 SUMO2P61956 95 aaKnown RBP9.26□□□□□ -0.93
IFT20-202ENST00000357896 C9orf129Q5T035 196 aaKnown RBP9.26□□□□□ -0.93
IFT20-202ENST00000357896 RETNLBQ9BQ08 111 aa9.26□□□□□ -0.93
IFT20-202ENST00000357896 A0A1B0GUT8 65 aa9.25□□□□□ -0.93
IFT20-202ENST00000357896 RPL28P46779 137 aaKnown RBP9.25□□□□□ -0.93
IFT20-202ENST00000357896 LBHQ53QV2 105 aaPredicted RBP9.25□□□□□ -0.93
IFT20-202ENST00000357896 CTDSP1Q9GZU7 261 aa9.25□□□□□ -0.93
IFT20-202ENST00000357896 IGLV7-46A0A075B6I9 117 aa9.24□□□□□ -0.93
IFT20-202ENST00000357896 TAGLN2P37802 199 aaKnown RBP9.24□□□□□ -0.93
IFT20-202ENST00000357896 LINC01547P58512 204 aaPredicted RBP9.24□□□□□ -0.93
IFT20-202ENST00000357896 CT83Q5H943 113 aa9.24□□□□□ -0.93
IFT20-202ENST00000357896 FAM231DQ6ZW35 169 aa9.24□□□□□ -0.93
IFT20-202ENST00000357896 AMN1Q8IY45 258 aa9.24□□□□□ -0.93
IFT20-202ENST00000357896 PACRGQ96M98 296 aaPredicted RBP9.24□□□□□ -0.93
IFT20-202ENST00000357896 PPP1R2P9O14990 202 aa9.23□□□□□ -0.93
IFT20-202ENST00000357896 KIAA0087Q14695 138 aa9.23□□□□□ -0.93
IFT20-202ENST00000357896 AKAP14Q86UN6 197 aa9.23□□□□□ -0.93
IFT20-202ENST00000357896 TGIF2-C20orf24A0A0A6YYL0 155 aa9.22□□□□□ -0.93
IFT20-202ENST00000357896 LINC00173Q6ZV60 143 aa9.22□□□□□ -0.93
IFT20-202ENST00000357896 TCTE3Q8IZS6 198 aa9.22□□□□□ -0.93
IFT20-202ENST00000357896 C22orf24Q9Y442 160 aa9.22□□□□□ -0.93
IFT20-202ENST00000357896 SMKR1H3BMG3 65 aa9.21□□□□□ -0.94
IFT20-202ENST00000357896 TCAPO15273 167 aa9.21□□□□□ -0.94
IFT20-202ENST00000357896 SMCPP49901 116 aaPredicted RBP9.21□□□□□ -0.94
IFT20-202ENST00000357896 HBBP68871 147 aa9.21□□□□□ -0.94
IFT20-202ENST00000357896 NRACQ8N912 160 aa9.21□□□□□ -0.94
IFT20-202ENST00000357896 LINC00304Q8N9R0 145 aa9.21□□□□□ -0.94
IFT20-202ENST00000357896 SPANXA1Q9NS26 97 aa9.21□□□□□ -0.94
IFT20-202ENST00000357896 IFITM10A6NMD0 228 aa9.2□□□□□ -0.94
IFT20-202ENST00000357896 HIGD1CA8MV81 97 aa9.2□□□□□ -0.94
IFT20-202ENST00000357896 BCE1O60756 84 aa9.2□□□□□ -0.94
IFT20-202ENST00000357896 CTAG1AP78358 180 aa9.2□□□□□ -0.94
IFT20-202ENST00000357896 MRPS36P82909 103 aaKnown RBP9.2□□□□□ -0.94
IFT20-202ENST00000357896 C2orf82Q6UX34 121 aa9.19□□□□□ -0.94
IFT20-202ENST00000357896 FAM104AQ969W3 186 aa9.19□□□□□ -0.94
IFT20-202ENST00000357896 RPL39P62891 51 aaKnown RBP9.18□□□□□ -0.94
IFT20-202ENST00000357896 C20orf78Q9BR46 151 aa9.18□□□□□ -0.94
IFT20-202ENST00000357896 ZNF727A8MUV8 499 aa9.17□□□□□ -0.94
IFT20-202ENST00000357896 FAM229BQ4G0N7 80 aa9.17□□□□□ -0.94
IFT20-202ENST00000357896 KRTAP13-2Q52LG2 175 aa9.17□□□□□ -0.94
IFT20-202ENST00000357896 ANAPC11Q9NYG5 84 aa9.17□□□□□ -0.94
IFT20-202ENST00000357896 RIGQ13278 110 aa9.16□□□□□ -0.94
IFT20-202ENST00000357896 PPDPFQ9H3Y8 114 aa9.16□□□□□ -0.94
IFT20-202ENST00000357896 TP73-AS1Q9UF72 201 aa9.16□□□□□ -0.94
IFT20-202ENST00000357896 RPL32P62910 135 aaKnown RBP9.15□□□□□ -0.94
IFT20-202ENST00000357896 MRPL55Q7Z7F7 128 aaKnown RBP9.15□□□□□ -0.94
IFT20-202ENST00000357896 TRBV24-1A0A075B6N3 115 aa9.14□□□□□ -0.95
IFT20-202ENST00000357896 LINC00862A6NCI5 91 aa9.14□□□□□ -0.95
IFT20-202ENST00000357896 TMEM250H0YL14 139 aa9.14□□□□□ -0.95
IFT20-202ENST00000357896 LINC00242Q5T6M2 205 aa9.14□□□□□ -0.95
IFT20-202ENST00000357896 LINC00469Q8N7U9 141 aa9.14□□□□□ -0.95
IFT20-202ENST00000357896 XAGE1AQ9HD64 81 aa9.14□□□□□ -0.95
IFT20-202ENST00000357896 IGKV2D-26A0A0A0MRZ7 120 aa9.13□□□□□ -0.95
IFT20-202ENST00000357896 CKS1BP61024 79 aa9.13□□□□□ -0.95
IFT20-202ENST00000357896 LINC01561Q8N1V8 128 aa9.13□□□□□ -0.95
IFT20-202ENST00000357896 PRSS2P07478 247 aa9.12□□□□□ -0.95
IFT20-202ENST00000357896 MRPL51Q4U2R6 128 aaKnown RBP9.12□□□□□ -0.95
IFT20-202ENST00000357896 IFI27P40305 119 aaPredicted RBP9.11□□□□□ -0.95
IFT20-202ENST00000357896 FAM104BQ5XKR9 115 aa9.11□□□□□ -0.95
IFT20-202ENST00000357896 LINC00337Q8N6G1 96 aa9.11□□□□□ -0.95
IFT20-202ENST00000357896 CKS2P33552 79 aa9.1□□□□□ -0.95
IFT20-202ENST00000357896 SRSF3P84103 164 aaKnown RBP9.1□□□□□ -0.95
IFT20-202ENST00000357896 C6orf226Q5I0X4 101 aa9.1□□□□□ -0.95
IFT20-202ENST00000357896 SMIM2Q9BVW6 85 aa9.1□□□□□ -0.95
IFT20-202ENST00000357896 OSTCQ9NRP0 149 aa9.1□□□□□ -0.95
IFT20-202ENST00000357896 TNFRSF6BO95407 300 aa9.09□□□□□ -0.95
IFT20-202ENST00000357896 UBE2AP49459 152 aa9.09□□□□□ -0.95
IFT20-202ENST00000357896 ASB16-AS1Q495Z4 193 aa9.09□□□□□ -0.95
IFT20-202ENST00000357896 PYGO1Q9Y3Y4 419 aa9.09□□□□□ -0.95
IFT20-202ENST00000357896 RPL37AP8A6NKH3 93 aa9.08□□□□□ -0.96
IFT20-202ENST00000357896 CEBPGP53567 150 aa9.08□□□□□ -0.96
IFT20-202ENST00000357896 Q6ZN92 141 aa9.08□□□□□ -0.96
IFT20-202ENST00000357896 LINC01551Q86U37 167 aa9.08□□□□□ -0.96
IFT20-202ENST00000357896 LINC00167Q96N53 147 aa9.08□□□□□ -0.96
IFT20-202ENST00000357896 TOMM7Q9P0U1 55 aa9.08□□□□□ -0.96
IFT20-202ENST00000357896 FP248Q71RG6 208 aaPredicted RBP9.07□□□□□ -0.96
IFT20-202ENST00000357896 KRTAP13-1Q8IUC0 172 aa9.07□□□□□ -0.96
IFT20-202ENST00000357896 Q8IZM0 81 aa9.07□□□□□ -0.96
IFT20-202ENST00000357896 TMEM141Q96I45 108 aa9.07□□□□□ -0.96
IFT20-202ENST00000357896 NAT8BQ9UHF3 227 aa9.07□□□□□ -0.96
IFT20-202ENST00000357896 RAB5AP20339 215 aa9.06□□□□□ -0.96
IFT20-202ENST00000357896 TEX43Q6ZNM6 134 aa9.06□□□□□ -0.96
IFT20-202ENST00000357896 C2orf88Q9BSF0 95 aa9.06□□□□□ -0.96
IFT20-202ENST00000357896 ALKBH7Q9BT30 221 aaPredicted RBP9.06□□□□□ -0.96
IFT20-202ENST00000357896 IGLV4-3A0A075B6K6 122 aa9.05□□□□□ -0.96
IFT20-202ENST00000357896 SPAG11AQ6PDA7 123 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms