RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 C3orf79P0CE67 100 aa16.82■□□□□ 0.28
SSBP3-202ENST00000357475 MAP1LC3CQ9BXW4 147 aa16.82■□□□□ 0.28
SSBP3-202ENST00000357475 CD164L2Q6UWJ8 174 aa16.81■□□□□ 0.28
SSBP3-202ENST00000357475 FAM19A3Q7Z5A8 133 aa16.81■□□□□ 0.28
SSBP3-202ENST00000357475 PMCHL2Q9BQD1 86 aa16.81■□□□□ 0.28
SSBP3-202ENST00000357475 TM2D2Q9BX73 214 aa16.81■□□□□ 0.28
SSBP3-202ENST00000357475 SYS1-DBNDD2H3BUS1 97 aa16.8■□□□□ 0.28
SSBP3-202ENST00000357475 PSCAO43653 123 aa16.8■□□□□ 0.28
SSBP3-202ENST00000357475 WFDC2Q14508 124 aa16.8■□□□□ 0.28
SSBP3-202ENST00000357475 ODF1Q14990 250 aa16.8■□□□□ 0.28
SSBP3-202ENST00000357475 MRPL35Q9NZE8 188 aaKnown RBP16.8■□□□□ 0.28
SSBP3-202ENST00000357475 CHTOPQ9Y3Y2 248 aaKnown RBP16.8■□□□□ 0.28
SSBP3-202ENST00000357475 IGHV3OR16-9A0A0B4J2B5 98 aa16.8■□□□□ 0.28
SSBP3-202ENST00000357475 LECT2O14960 151 aa16.8■□□□□ 0.28
SSBP3-202ENST00000357475 KRTDAPP60985 99 aa16.8■□□□□ 0.28
SSBP3-202ENST00000357475 C5orf38Q86SI9 138 aa16.8■□□□□ 0.28
SSBP3-202ENST00000357475 IGLC3P0DOY3 106 aa16.78■□□□□ 0.28
SSBP3-202ENST00000357475 COX11Q9Y6N1 276 aa16.78■□□□□ 0.28
SSBP3-202ENST00000357475 TINCRA0A1B0GVN0 87 aa16.77■□□□□ 0.28
SSBP3-202ENST00000357475 TNP2Q05952 138 aa16.77■□□□□ 0.28
SSBP3-202ENST00000357475 CHAC1Q9BUX1 264 aa16.77■□□□□ 0.28
SSBP3-202ENST00000357475 C11orf86A6NJI1 115 aa16.76■□□□□ 0.27
SSBP3-202ENST00000357475 CDKN2A-AS1Q9UH64 79 aa16.76■□□□□ 0.27
SSBP3-202ENST00000357475 DNAH11Q96DT5 4516 aa16.76■□□□□ 0.27
SSBP3-202ENST00000357475 LRCOL1A6NCL2 159 aa16.75■□□□□ 0.27
SSBP3-202ENST00000357475 F8VRH5 84 aa16.75■□□□□ 0.27
SSBP3-202ENST00000357475 GEMIN7Q9H840 131 aaKnown RBP16.75■□□□□ 0.27
SSBP3-202ENST00000357475 COX7A2LO14548 114 aa16.74■□□□□ 0.27
SSBP3-202ENST00000357475 HERVK_113P63121 156 aa16.74■□□□□ 0.27
SSBP3-202ENST00000357475 LINC00469Q8N7U9 141 aa16.73■□□□□ 0.27
SSBP3-202ENST00000357475 IGLV5-45A0A087WSX0 123 aa16.72■□□□□ 0.27
SSBP3-202ENST00000357475 ZNF22P17026 224 aaPredicted RBP16.72■□□□□ 0.27
SSBP3-202ENST00000357475 SEC11AP67812 179 aa16.72■□□□□ 0.27
SSBP3-202ENST00000357475 PET117Q6UWS5 81 aa16.72■□□□□ 0.27
SSBP3-202ENST00000357475 C15orf56Q8N910 161 aa16.72■□□□□ 0.27
SSBP3-202ENST00000357475 USP17L23D6RBM5 183 aa16.71■□□□□ 0.27
SSBP3-202ENST00000357475 LINC01545Q5VT33 79 aa16.71■□□□□ 0.27
SSBP3-202ENST00000357475 OR10D4PQ8NGN7 298 aa16.71■□□□□ 0.27
SSBP3-202ENST00000357475 A0A087WZ39 114 aa16.7■□□□□ 0.26
SSBP3-202ENST00000357475 PKD1P98161 4303 aa16.7■□□□□ 0.26
SSBP3-202ENST00000357475 A0A087WTM6 91 aa16.7■□□□□ 0.26
SSBP3-202ENST00000357475 MALP21145 153 aa16.68■□□□□ 0.26
SSBP3-202ENST00000357475 SPINK8P0C7L1 97 aa16.67■□□□□ 0.26
SSBP3-202ENST00000357475 HIGD2BQ4VC39 106 aa16.67■□□□□ 0.26
SSBP3-202ENST00000357475 TMEM170BQ5T4T1 132 aa16.67■□□□□ 0.26
SSBP3-202ENST00000357475 DPM2O94777 84 aa16.66■□□□□ 0.26
SSBP3-202ENST00000357475 LINC00526Q96FQ7 95 aa16.66■□□□□ 0.26
SSBP3-202ENST00000357475 SMIM1B2RUZ4 78 aa16.65■□□□□ 0.26
SSBP3-202ENST00000357475 IGKCP01834 107 aa16.65■□□□□ 0.26
SSBP3-202ENST00000357475 PLNP26678 52 aa16.65■□□□□ 0.26
SSBP3-202ENST00000357475 IGHV1-58A0A0C4DH39 117 aa16.64■□□□□ 0.25
SSBP3-202ENST00000357475 FUSP35637 526 aaKnown RBP eCLIP16.64■□□□□ 0.252e-6■■■□□ 16.5
SSBP3-202ENST00000357475 IGHV3-64A0A075B6Q5 118 aa16.63■□□□□ 0.25
SSBP3-202ENST00000357475 ATOH7Q8N100 152 aa16.62■□□□□ 0.25
SSBP3-202ENST00000357475 ORAOV1Q8WV07 137 aa16.62■□□□□ 0.25
SSBP3-202ENST00000357475 Q8N814 137 aa16.61■□□□□ 0.25
SSBP3-202ENST00000357475 GVQW2A0A096LPI5 108 aaPredicted RBP16.6■□□□□ 0.25
SSBP3-202ENST00000357475 hDV102S1A0JD36 115 aa16.6■□□□□ 0.25
SSBP3-202ENST00000357475 TMEM223A0PJW6 202 aa16.6■□□□□ 0.25
SSBP3-202ENST00000357475 LINC01561Q8N1V8 128 aa16.6■□□□□ 0.25
SSBP3-202ENST00000357475 IGLV2-33A0A075B6J2 118 aaPredicted RBP16.6■□□□□ 0.25
SSBP3-202ENST00000357475 H3BRM9 83 aa16.6■□□□□ 0.25
SSBP3-202ENST00000357475 CFAP161Q6P656 301 aa16.6■□□□□ 0.25
SSBP3-202ENST00000357475 LINC00336Q6ZUF6 198 aa16.6■□□□□ 0.25
SSBP3-202ENST00000357475 DNAH5Q8TE73 4624 aa16.59■□□□□ 0.25
SSBP3-202ENST00000357475 C20orf202A1L168 122 aa16.59■□□□□ 0.25
SSBP3-202ENST00000357475 APOMO95445 188 aa16.59■□□□□ 0.25
SSBP3-202ENST00000357475 SLPIP03973 132 aa16.59■□□□□ 0.25
SSBP3-202ENST00000357475 SPAG11BQ08648 103 aa16.58■□□□□ 0.24
SSBP3-202ENST00000357475 KIAA0087Q14695 138 aa16.58■□□□□ 0.24
SSBP3-202ENST00000357475 HECTD4Q9Y4D8 3996 aa16.57■□□□□ 0.24
SSBP3-202ENST00000357475 NTN5Q8WTR8 489 aaPredicted RBP16.57■□□□□ 0.24
SSBP3-202ENST00000357475 TOMM7Q9P0U1 55 aa16.57■□□□□ 0.24
SSBP3-202ENST00000357475 IGLV5-39A0A0G2JS06 123 aa16.56■□□□□ 0.24
SSBP3-202ENST00000357475 SCGB1D1O95968 90 aa16.55■□□□□ 0.24
SSBP3-202ENST00000357475 KRTAP10-2P60368 255 aa16.55■□□□□ 0.24
SSBP3-202ENST00000357475 STPG4Q8N801 248 aa16.55■□□□□ 0.24
SSBP3-202ENST00000357475 A0A1B0GVY2 172 aa16.54■□□□□ 0.24
SSBP3-202ENST00000357475 C14orf177Q52M58 125 aa16.54■□□□□ 0.24
SSBP3-202ENST00000357475 ZNF561-AS1K7EIQ3 104 aa16.53■□□□□ 0.24
SSBP3-202ENST00000357475 MAJINQ3KP22 176 aa16.53■□□□□ 0.24
SSBP3-202ENST00000357475 C2orf82Q6UX34 121 aa16.52■□□□□ 0.24
SSBP3-202ENST00000357475 COX7B2Q8TF08 81 aa16.52■□□□□ 0.24
SSBP3-202ENST00000357475 PKHD1P08F94 4074 aa16.52■□□□□ 0.23
SSBP3-202ENST00000357475 EREGO14944 169 aa16.5■□□□□ 0.23
SSBP3-202ENST00000357475 TSPEAR-AS2P59090 65 aa16.5■□□□□ 0.23
SSBP3-202ENST00000357475 Q8IZM0 81 aa16.5■□□□□ 0.23
SSBP3-202ENST00000357475 AKR1D1P51857 326 aa16.5■□□□□ 0.23
SSBP3-202ENST00000357475 JOSD1Q15040 202 aaPredicted RBP16.5■□□□□ 0.23
SSBP3-202ENST00000357475 C10orf25Q5T742 122 aa16.5■□□□□ 0.23
SSBP3-202ENST00000357475 PRSS2P07478 247 aa16.49■□□□□ 0.23
SSBP3-202ENST00000357475 C6orf226Q5I0X4 101 aa16.48■□□□□ 0.23
SSBP3-202ENST00000357475 PYY3Q5JQD4 70 aa16.48■□□□□ 0.23
SSBP3-202ENST00000357475 UNQ6190/PRO20217Q6UXQ8 127 aa16.48■□□□□ 0.23
SSBP3-202ENST00000357475 Q6ZRU5 148 aa16.48■□□□□ 0.23
SSBP3-202ENST00000357475 LINC01620Q4KN68 170 aa16.47■□□□□ 0.23
SSBP3-202ENST00000357475 ANKRD39Q53RE8 183 aa16.47■□□□□ 0.23
SSBP3-202ENST00000357475 CAMK2N2Q96S95 79 aa16.47■□□□□ 0.23
SSBP3-202ENST00000357475 IGKV2D-26A0A0A0MRZ7 120 aa16.46■□□□□ 0.23
SSBP3-202ENST00000357475 LOC105371267A0A1B0GV96 52 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms