RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 C1QAP02745 245 aa0.89□□□□□ -2.27
BRCA1-202ENST00000354071 IGKV3-11P04433 115 aa0.89□□□□□ -2.27
BRCA1-202ENST00000354071 GPX1P07203 203 aa0.89□□□□□ -2.27
BRCA1-202ENST00000354071 CXCL1P09341 107 aa0.89□□□□□ -2.27
BRCA1-202ENST00000354071 C3orf79P0CE67 100 aa0.89□□□□□ -2.27
BRCA1-202ENST00000354071 GCHFRP30047 84 aa0.89□□□□□ -2.27
BRCA1-202ENST00000354071 HAMPP81172 84 aa0.89□□□□□ -2.27
BRCA1-202ENST00000354071 Q6AWC8 147 aa0.89□□□□□ -2.27
BRCA1-202ENST00000354071 SPTSSBQ8NFR3 76 aa0.89□□□□□ -2.27
BRCA1-202ENST00000354071 CLDND2Q8NHS1 167 aa0.89□□□□□ -2.27
BRCA1-202ENST00000354071 AQP3Q92482 292 aa0.89□□□□□ -2.27
BRCA1-202ENST00000354071 DPH3Q96FX2 82 aa0.89□□□□□ -2.27
BRCA1-202ENST00000354071 ZNF625Q96I27 306 aaPredicted RBP0.89□□□□□ -2.27
BRCA1-202ENST00000354071 WFDC6Q9BQY6 131 aa0.89□□□□□ -2.27
BRCA1-202ENST00000354071 KRTAP2-1Q9BYU5 128 aa0.89□□□□□ -2.27
BRCA1-202ENST00000354071 UBL5Q9BZL1 73 aa0.89□□□□□ -2.27
BRCA1-202ENST00000354071 TOMM7Q9P0U1 55 aa0.89□□□□□ -2.27
BRCA1-202ENST00000354071 TMEM56-RWDD3S4R434 201 aa0.89□□□□□ -2.27
BRCA1-202ENST00000354071 SIPA1L3O60292 1781 aaPredicted RBP0.88□□□□□ -2.27
BRCA1-202ENST00000354071 PSME4Q14997 1843 aa0.88□□□□□ -2.27
BRCA1-202ENST00000354071 A0A1W2PPM0 123 aa0.88□□□□□ -2.27
BRCA1-202ENST00000354071 LINC01549A6NIU2 74 aa0.88□□□□□ -2.27
BRCA1-202ENST00000354071 CCL25O15444 150 aa0.88□□□□□ -2.27
BRCA1-202ENST00000354071 IGHV3-7P01780 117 aa0.88□□□□□ -2.27
BRCA1-202ENST00000354071 C1QCP02747 245 aa0.88□□□□□ -2.27
BRCA1-202ENST00000354071 SAA1P0DJI8 122 aaPredicted RBP0.88□□□□□ -2.27
BRCA1-202ENST00000354071 ASIPP42127 132 aa0.88□□□□□ -2.27
BRCA1-202ENST00000354071 FKBP1AP62942 108 aaKnown RBP0.88□□□□□ -2.27
BRCA1-202ENST00000354071 SUPT4H1P63272 117 aaKnown RBP0.88□□□□□ -2.27
BRCA1-202ENST00000354071 FAM74A4Q5TZK3 123 aa0.88□□□□□ -2.27
BRCA1-202ENST00000354071 TEX36Q5VZQ5 186 aa0.88□□□□□ -2.27
BRCA1-202ENST00000354071 Q6ZQT7 251 aa0.88□□□□□ -2.27
BRCA1-202ENST00000354071 LINC00305Q7Z4B0 112 aa0.88□□□□□ -2.27
BRCA1-202ENST00000354071 DSPPQ9NZW4 1301 aa0.88□□□□□ -2.27
BRCA1-202ENST00000354071 SCN8AQ9UQD0 1980 aa0.88□□□□□ -2.27
BRCA1-202ENST00000354071 SPTBN1Q01082 2364 aaKnown RBP0.88□□□□□ -2.27
BRCA1-202ENST00000354071 SONP18583 2426 aaKnown RBP0.88□□□□□ -2.27
BRCA1-202ENST00000354071 CCDC88CQ9P219 2028 aa0.88□□□□□ -2.27
BRCA1-202ENST00000354071 TRAV17A0A0B4J275 112 aa0.88□□□□□ -2.27
BRCA1-202ENST00000354071 CLPSL1A2RUU4 121 aa0.88□□□□□ -2.27
BRCA1-202ENST00000354071 H3BMG7 143 aa0.88□□□□□ -2.27
BRCA1-202ENST00000354071 SYS1-DBNDD2H3BUS1 97 aa0.88□□□□□ -2.27
BRCA1-202ENST00000354071 ATOX1O00244 68 aa0.88□□□□□ -2.27
BRCA1-202ENST00000354071 NPFFO15130 113 aa0.88□□□□□ -2.27
BRCA1-202ENST00000354071 PRM2P04554 102 aa0.88□□□□□ -2.27
BRCA1-202ENST00000354071 ACYP1P07311 99 aa0.88□□□□□ -2.27
BRCA1-202ENST00000354071 NBEAP1P0C6P0 100 aa0.88□□□□□ -2.27
BRCA1-202ENST00000354071 IGLC2P0DOY2 106 aa0.88□□□□□ -2.27
BRCA1-202ENST00000354071 IGLC3P0DOY3 106 aa0.88□□□□□ -2.27
BRCA1-202ENST00000354071 IFI27P40305 119 aaPredicted RBP0.88□□□□□ -2.27
BRCA1-202ENST00000354071 INSL3P51460 131 aa0.88□□□□□ -2.27
BRCA1-202ENST00000354071 RRN3P1Q2M238 152 aa0.88□□□□□ -2.27
BRCA1-202ENST00000354071 SPINT4Q6UDR6 99 aa0.88□□□□□ -2.27
BRCA1-202ENST00000354071 LYZL1Q6UWQ5 148 aa0.88□□□□□ -2.27
BRCA1-202ENST00000354071 RPS19BP1Q86WX3 136 aaKnown RBP0.88□□□□□ -2.27
BRCA1-202ENST00000354071 PRADC1Q9BSG0 188 aa0.88□□□□□ -2.27
BRCA1-202ENST00000354071 NPCDR1Q9BY65 106 aa0.88□□□□□ -2.27
BRCA1-202ENST00000354071 MRPL32Q9BYC8 188 aaKnown RBP0.88□□□□□ -2.27
BRCA1-202ENST00000354071 LCE3DQ9BYE3 92 aa0.88□□□□□ -2.27
BRCA1-202ENST00000354071 OSTCQ9NRP0 149 aa0.88□□□□□ -2.27
BRCA1-202ENST00000354071 MPC1Q9Y5U8 109 aa0.88□□□□□ -2.27
BRCA1-202ENST00000354071 MYO9BQ13459 2157 aa0.88□□□□□ -2.27
BRCA1-202ENST00000354071 SDK1Q7Z5N4 2213 aa0.88□□□□□ -2.27
BRCA1-202ENST00000354071 MALRD1Q5VYJ5 2156 aa0.88□□□□□ -2.27
BRCA1-202ENST00000354071 IGHV3-15A0A0B4J1V0 119 aa0.88□□□□□ -2.27
BRCA1-202ENST00000354071 A0A1B0GX51 115 aa0.88□□□□□ -2.27
BRCA1-202ENST00000354071 IQCF6A8MYZ5 107 aa0.88□□□□□ -2.27
BRCA1-202ENST00000354071 ZNF73O43830 326 aaPredicted RBP0.88□□□□□ -2.27
BRCA1-202ENST00000354071 PGLYRP1O75594 196 aaPredicted RBP0.88□□□□□ -2.27
BRCA1-202ENST00000354071 PYYP10082 97 aa0.88□□□□□ -2.27
BRCA1-202ENST00000354071 LINC00158P58513 81 aa0.88□□□□□ -2.27
BRCA1-202ENST00000354071 CCL20P78556 96 aa0.88□□□□□ -2.27
BRCA1-202ENST00000354071 BVES-AS1Q5T3Y7 98 aa0.88□□□□□ -2.27
BRCA1-202ENST00000354071 RPRMLQ8N4K4 120 aa0.88□□□□□ -2.27
BRCA1-202ENST00000354071 OR11H6Q8NGC7 330 aa0.88□□□□□ -2.27
BRCA1-202ENST00000354071 PLEKHB2Q96CS7 222 aa0.88□□□□□ -2.27
BRCA1-202ENST00000354071 REG4Q9BYZ8 158 aa0.88□□□□□ -2.27
BRCA1-202ENST00000354071 RNF122Q9H9V4 155 aa0.88□□□□□ -2.27
BRCA1-202ENST00000354071 DOCK10Q96BY6 2186 aa0.88□□□□□ -2.27
BRCA1-202ENST00000354071 UNC13CQ8NB66 2214 aa0.88□□□□□ -2.27
BRCA1-202ENST00000354071 TRAV12-1A0A0B4J245 112 aa0.87□□□□□ -2.27
BRCA1-202ENST00000354071 D6R8Y8 96 aa0.87□□□□□ -2.27
BRCA1-202ENST00000354071 TAX1BP3O14907 124 aa0.87□□□□□ -2.27
BRCA1-202ENST00000354071 APELAP0DMC3 54 aa0.87□□□□□ -2.27
BRCA1-202ENST00000354071 RNASE2P10153 161 aaKnown RBP0.87□□□□□ -2.27
BRCA1-202ENST00000354071 RPL27AP46776 148 aaKnown RBP0.87□□□□□ -2.27
BRCA1-202ENST00000354071 DEFB133Q30KQ1 61 aa0.87□□□□□ -2.27
BRCA1-202ENST00000354071 PIGYQ3MUY2 71 aa0.87□□□□□ -2.27
BRCA1-202ENST00000354071 MUSTN1Q8IVN3 82 aa0.87□□□□□ -2.27
BRCA1-202ENST00000354071 WFDC9Q8NEX5 89 aa0.87□□□□□ -2.27
BRCA1-202ENST00000354071 SMCR5Q8TEV8 140 aa0.87□□□□□ -2.27
BRCA1-202ENST00000354071 TSKUQ8WUA8 353 aa0.87□□□□□ -2.27
BRCA1-202ENST00000354071 SIPA1L1O43166 1804 aa0.87□□□□□ -2.27
BRCA1-202ENST00000354071 PTPRSQ13332 1948 aa0.87□□□□□ -2.27
BRCA1-202ENST00000354071 MPDZO75970 2070 aa0.87□□□□□ -2.27
BRCA1-202ENST00000354071 IGKV2-28A0A075B6P5 120 aa0.87□□□□□ -2.27
BRCA1-202ENST00000354071 IGHV3-64A0A075B6Q5 118 aa0.87□□□□□ -2.27
BRCA1-202ENST00000354071 TRAV14DV4A0A0A6YYC5 116 aa0.87□□□□□ -2.27
BRCA1-202ENST00000354071 A0A0J9YX75 114 aa0.87□□□□□ -2.27
BRCA1-202ENST00000354071 FAM236AA0A1B0GUQ0 79 aa0.87□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms