RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 Q9HAA7 133 aa18.11■□□□□ 0.49
SSBP4-202ENST00000348495 SCGB1D1O95968 90 aa18.1■□□□□ 0.49
SSBP4-202ENST00000348495 IGKCP01834 107 aa18.1■□□□□ 0.49
SSBP4-202ENST00000348495 HERVK_113P63121 156 aa18.1■□□□□ 0.49
SSBP4-202ENST00000348495 IGHV3OR16-9A0A0B4J2B5 98 aa18.09■□□□□ 0.49
SSBP4-202ENST00000348495 PYY3Q5JQD4 70 aa18.09■□□□□ 0.49
SSBP4-202ENST00000348495 GEMIN7Q9H840 131 aaKnown RBP18.09■□□□□ 0.49
SSBP4-202ENST00000348495 CD164L2Q6UWJ8 174 aa18.09■□□□□ 0.49
SSBP4-202ENST00000348495 C1orf43Q9BWL3 253 aa18.08■□□□□ 0.48
SSBP4-202ENST00000348495 ZNF22P17026 224 aaPredicted RBP18.07■□□□□ 0.48
SSBP4-202ENST00000348495 M0R2N4 97 aa18.06■□□□□ 0.48
SSBP4-202ENST00000348495 FOXI1Q12951 378 aa18.06■□□□□ 0.48
SSBP4-202ENST00000348495 CDKN2A-AS1Q9UH64 79 aa18.06■□□□□ 0.48
SSBP4-202ENST00000348495 IGKV2D-24A0A075B6R9 120 aa18.05■□□□□ 0.48
SSBP4-202ENST00000348495 GAGE12HA6NDE8 117 aa18.05■□□□□ 0.48
SSBP4-202ENST00000348495 ATOH7Q8N100 152 aa18.04■□□□□ 0.48
SSBP4-202ENST00000348495 LINC00469Q8N7U9 141 aa18.04■□□□□ 0.48
SSBP4-202ENST00000348495 RMI2Q96E14 147 aa18.04■□□□□ 0.48
SSBP4-202ENST00000348495 LCE6AA0A183 80 aa18.03■□□□□ 0.48
SSBP4-202ENST00000348495 TMEM170BQ5T4T1 132 aa18.03■□□□□ 0.48
SSBP4-202ENST00000348495 A0A087WZ39 114 aa18.01■□□□□ 0.47
SSBP4-202ENST00000348495 KMT2AQ03164 3969 aa18.01■□□□□ 0.47
SSBP4-202ENST00000348495 C5orf38Q86SI9 138 aa18.01■□□□□ 0.47
SSBP4-202ENST00000348495 DNAH6Q9C0G6 4158 aa18■□□□□ 0.47
SSBP4-202ENST00000348495 COX11Q9Y6N1 276 aa18■□□□□ 0.47
SSBP4-202ENST00000348495 COX7A2LO14548 114 aa17.99■□□□□ 0.47
SSBP4-202ENST00000348495 TMEM223A0PJW6 202 aa17.98■□□□□ 0.47
SSBP4-202ENST00000348495 MAPKAPK5-AS1Q8N8E1 139 aa17.98■□□□□ 0.47
SSBP4-202ENST00000348495 TM2D2Q9BX73 214 aa17.98■□□□□ 0.47
SSBP4-202ENST00000348495 H3BRM9 83 aa17.98■□□□□ 0.47
SSBP4-202ENST00000348495 Q6ZRN7 208 aaPredicted RBP17.98■□□□□ 0.47
SSBP4-202ENST00000348495 LINC01561Q8N1V8 128 aa17.98■□□□□ 0.47
SSBP4-202ENST00000348495 STPG4Q8N801 248 aa17.97■□□□□ 0.47
SSBP4-202ENST00000348495 CDPF1Q6NVV7 123 aa17.96■□□□□ 0.47
SSBP4-202ENST00000348495 SMIM1B2RUZ4 78 aa17.95■□□□□ 0.46
SSBP4-202ENST00000348495 MAJINQ3KP22 176 aa17.95■□□□□ 0.46
SSBP4-202ENST00000348495 hDV102S1A0JD36 115 aa17.95■□□□□ 0.46
SSBP4-202ENST00000348495 SPINK8P0C7L1 97 aa17.95■□□□□ 0.46
SSBP4-202ENST00000348495 C6orf223Q8N319 242 aa17.95■□□□□ 0.46
SSBP4-202ENST00000348495 SMIM6P0DI80 62 aa17.93■□□□□ 0.46
SSBP4-202ENST00000348495 IGLV5-39A0A0G2JS06 123 aa17.92■□□□□ 0.46
SSBP4-202ENST00000348495 SACSQ9NZJ4 4579 aa17.92■□□□□ 0.46
SSBP4-202ENST00000348495 MALP21145 153 aa17.91■□□□□ 0.46
SSBP4-202ENST00000348495 IGHV1-58A0A0C4DH39 117 aa17.9■□□□□ 0.46
SSBP4-202ENST00000348495 C1orf134Q5TEV5 83 aa17.9■□□□□ 0.46
SSBP4-202ENST00000348495 IGHV3-64A0A075B6Q5 118 aa17.89■□□□□ 0.46
SSBP4-202ENST00000348495 HERVK_113P61574 105 aa17.89■□□□□ 0.46
SSBP4-202ENST00000348495 ANKRD39Q53RE8 183 aa17.89■□□□□ 0.46
SSBP4-202ENST00000348495 E9PLD3 99 aa17.89■□□□□ 0.45
SSBP4-202ENST00000348495 C15orf56Q8N910 161 aa17.88■□□□□ 0.45
SSBP4-202ENST00000348495 PSCAO43653 123 aa17.87■□□□□ 0.45
SSBP4-202ENST00000348495 APOMO95445 188 aa17.87■□□□□ 0.45
SSBP4-202ENST00000348495 HSBP1L1C9JCN9 74 aa17.86■□□□□ 0.45
SSBP4-202ENST00000348495 VAMP8Q9BV40 100 aa17.86■□□□□ 0.45
SSBP4-202ENST00000348495 DNAH10Q8IVF4 4471 aa17.86■□□□□ 0.45
SSBP4-202ENST00000348495 IGKV2D-26A0A0A0MRZ7 120 aa17.85■□□□□ 0.45
SSBP4-202ENST00000348495 DNAH2Q9P225 4427 aa17.84■□□□□ 0.45
SSBP4-202ENST00000348495 LEPROTO15243 131 aa17.84■□□□□ 0.45
SSBP4-202ENST00000348495 ORAOV1Q8WV07 137 aa17.84■□□□□ 0.45
SSBP4-202ENST00000348495 HYDINQ4G0P3 5121 aa17.84■□□□□ 0.45
SSBP4-202ENST00000348495 USP17L23D6RBM5 183 aa17.83■□□□□ 0.44
SSBP4-202ENST00000348495 TSPEAR-AS2P59090 65 aa17.83■□□□□ 0.44
SSBP4-202ENST00000348495 KIAA0087Q14695 138 aa17.83■□□□□ 0.44
SSBP4-202ENST00000348495 CFAP161Q6P656 301 aa17.83■□□□□ 0.44
SSBP4-202ENST00000348495 PAM16Q9Y3D7 125 aa17.83■□□□□ 0.44
SSBP4-202ENST00000348495 GVQW2A0A096LPI5 108 aaPredicted RBP17.82■□□□□ 0.44
SSBP4-202ENST00000348495 WFDC2Q14508 124 aa17.82■□□□□ 0.44
SSBP4-202ENST00000348495 KMT2CQ8NEZ4 4911 aaKnown RBP17.82■□□□□ 0.44
SSBP4-202ENST00000348495 LRCOL1A6NCL2 159 aa17.81■□□□□ 0.44
SSBP4-202ENST00000348495 COX7B2Q8TF08 81 aa17.81■□□□□ 0.44
SSBP4-202ENST00000348495 PLEKHB2Q96CS7 222 aa17.81■□□□□ 0.44
SSBP4-202ENST00000348495 Q8IZM0 81 aa17.81■□□□□ 0.44
SSBP4-202ENST00000348495 J3QQQ9 107 aa17.8■□□□□ 0.44
SSBP4-202ENST00000348495 SPATA45Q537H7 98 aa17.8■□□□□ 0.44
SSBP4-202ENST00000348495 LECT2O14960 151 aa17.79■□□□□ 0.44
SSBP4-202ENST00000348495 SPAG11BQ08648 103 aa17.79■□□□□ 0.44
SSBP4-202ENST00000348495 TOMM7Q9P0U1 55 aa17.79■□□□□ 0.44
SSBP4-202ENST00000348495 RTL8CO15255 209 aa17.78■□□□□ 0.44
SSBP4-202ENST00000348495 S100A12P80511 92 aa17.78■□□□□ 0.44
SSBP4-202ENST00000348495 HIGD2BQ4VC39 106 aa17.78■□□□□ 0.44
SSBP4-202ENST00000348495 NMUP48645 174 aa17.78■□□□□ 0.44
SSBP4-202ENST00000348495 C12orf57Q99622 126 aa17.78■□□□□ 0.44
SSBP4-202ENST00000348495 LINC00518Q8N0U6 118 aa17.76■□□□□ 0.43
SSBP4-202ENST00000348495 PRSS2P07478 247 aa17.75■□□□□ 0.43
SSBP4-202ENST00000348495 C6orf226Q5I0X4 101 aa17.75■□□□□ 0.43
SSBP4-202ENST00000348495 NTN5Q8WTR8 489 aaPredicted RBP17.75■□□□□ 0.43
SSBP4-202ENST00000348495 LINC00526Q96FQ7 95 aa17.75■□□□□ 0.43
SSBP4-202ENST00000348495 LGALS3P17931 250 aaKnown RBP17.75■□□□□ 0.43
SSBP4-202ENST00000348495 TTTY13Q9BZ97 58 aa17.75■□□□□ 0.43
SSBP4-202ENST00000348495 ZNF561-AS1K7EIQ3 104 aa17.74■□□□□ 0.43
SSBP4-202ENST00000348495 PCP2Q8IVA1 136 aa17.74■□□□□ 0.43
SSBP4-202ENST00000348495 ZNF625Q96I27 306 aaPredicted RBP17.73■□□□□ 0.43
SSBP4-202ENST00000348495 A0A087WTM6 91 aa17.72■□□□□ 0.43
SSBP4-202ENST00000348495 C2orf48Q96LS8 159 aa17.72■□□□□ 0.43
SSBP4-202ENST00000348495 NDUFA12Q9UI09 145 aa17.72■□□□□ 0.43
SSBP4-202ENST00000348495 C2orf82Q6UX34 121 aa17.71■□□□□ 0.43
SSBP4-202ENST00000348495 DNAH17Q9UFH2 4485 aa17.71■□□□□ 0.43
SSBP4-202ENST00000348495 NDUFA1O15239 70 aa17.7■□□□□ 0.42
SSBP4-202ENST00000348495 CXCL5P42830 114 aa17.7■□□□□ 0.42
SSBP4-202ENST00000348495 C14orf177Q52M58 125 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms