RNA–Protein interactions for RNA: ENST00000347547.6

LRP8-202, Transcript of LDL receptor related protein 8, humanhuman

TSL 1 (best) BASIC

Gene LRP8, Length 2,382 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-202ENST00000347547 Q5XG85 94 aa11.16□□□□□ -0.62
LRP8-202ENST00000347547 ZNF462Q96JM2 2506 aa11.15□□□□□ -0.62
LRP8-202ENST00000347547 CDC42SE2Q9NRR3 84 aa11.15□□□□□ -0.62
LRP8-202ENST00000347547 MYO18BQ8IUG5 2567 aa11.15□□□□□ -0.62
LRP8-202ENST00000347547 PRM2P04554 102 aa11.14□□□□□ -0.63
LRP8-202ENST00000347547 ATP5EP2Q5VTU8 51 aa11.14□□□□□ -0.63
LRP8-202ENST00000347547 MIR7-3HGQ8N6C7 128 aa11.14□□□□□ -0.63
LRP8-202ENST00000347547 NDUFC2O95298 119 aa11.13□□□□□ -0.63
LRP8-202ENST00000347547 Q96MF0 132 aa11.13□□□□□ -0.63
LRP8-202ENST00000347547 S100A7L2Q5SY68 101 aa11.13□□□□□ -0.63
LRP8-202ENST00000347547 ZNF843Q8N446 348 aa11.13□□□□□ -0.63
LRP8-202ENST00000347547 CCKP06307 115 aa11.12□□□□□ -0.63
LRP8-202ENST00000347547 DEFB131AP59861 70 aa11.12□□□□□ -0.63
LRP8-202ENST00000347547 CRYBG3Q68DQ2 2970 aa11.11□□□□□ -0.63
LRP8-202ENST00000347547 IGHV4-61A0A0C4DH41 118 aa11.11□□□□□ -0.63
LRP8-202ENST00000347547 C4orf26Q17RF5 130 aa11.11□□□□□ -0.63
LRP8-202ENST00000347547 TRBV10-1A0A0K0K1A3 114 aa11.11□□□□□ -0.63
LRP8-202ENST00000347547 NTM-AS1Q6ZSK4 140 aa11.11□□□□□ -0.63
LRP8-202ENST00000347547 COX7B2Q8TF08 81 aa11.11□□□□□ -0.63
LRP8-202ENST00000347547 NCR3O14931 201 aa11.1□□□□□ -0.63
LRP8-202ENST00000347547 LECT2O14960 151 aa11.1□□□□□ -0.63
LRP8-202ENST00000347547 FHL2Q14192 279 aa11.1□□□□□ -0.63
LRP8-202ENST00000347547 CCL18P55774 89 aa11.09□□□□□ -0.63
LRP8-202ENST00000347547 RPL36AP83881 106 aaKnown RBP11.09□□□□□ -0.63
LRP8-202ENST00000347547 SS18Q15532 418 aa11.09□□□□□ -0.63
LRP8-202ENST00000347547 RPL36ALQ969Q0 106 aaKnown RBP11.09□□□□□ -0.63
LRP8-202ENST00000347547 C10orf99Q6UWK7 81 aa11.09□□□□□ -0.63
LRP8-202ENST00000347547 LYPD5Q6UWN5 251 aa11.09□□□□□ -0.63
LRP8-202ENST00000347547 LINC00167Q96N53 147 aa11.08□□□□□ -0.64
LRP8-202ENST00000347547 ORMDL1Q9P0S3 153 aa11.08□□□□□ -0.64
LRP8-202ENST00000347547 CELSR2Q9HCU4 2923 aa11.08□□□□□ -0.64
LRP8-202ENST00000347547 LY6G6DO95868 133 aa11.08□□□□□ -0.64
LRP8-202ENST00000347547 FBN2P35556 2912 aa11.07□□□□□ -0.64
LRP8-202ENST00000347547 MAP1AP78559 2803 aaPredicted RBP11.07□□□□□ -0.64
LRP8-202ENST00000347547 TRBV10-3A0A0K0K1G6 114 aa11.07□□□□□ -0.64
LRP8-202ENST00000347547 IBA57-AS1B1ANH7 110 aa11.07□□□□□ -0.64
LRP8-202ENST00000347547 KMT2BQ9UMN6 2715 aaPredicted RBP11.07□□□□□ -0.64
LRP8-202ENST00000347547 EPM2AB3EWF7 344 aa11.06□□□□□ -0.64
LRP8-202ENST00000347547 GHRHP01286 108 aa11.06□□□□□ -0.64
LRP8-202ENST00000347547 INSP01308 110 aa11.06□□□□□ -0.64
LRP8-202ENST00000347547 HRCT1Q6UXD1 115 aa11.06□□□□□ -0.64
LRP8-202ENST00000347547 MRAPQ8TCY5 172 aa11.06□□□□□ -0.64
LRP8-202ENST00000347547 K7EQD1 137 aa11.06□□□□□ -0.64
LRP8-202ENST00000347547 LINC00158P58513 81 aa11.06□□□□□ -0.64
LRP8-202ENST00000347547 IL17DQ8TAD2 202 aa11.06□□□□□ -0.64
LRP8-202ENST00000347547 JMJD7-PLA2G4BH0Y9G9 81 aa11.05□□□□□ -0.64
LRP8-202ENST00000347547 LRRK2Q5S007 2527 aa11.04□□□□□ -0.64
LRP8-202ENST00000347547 BCE1O60756 84 aa11.04□□□□□ -0.64
LRP8-202ENST00000347547 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.03□□□□□ -0.642e-7■■■■□ 24.8
LRP8-202ENST00000347547 TRBV6-4A0A1B0GX49 114 aa11.03□□□□□ -0.64
LRP8-202ENST00000347547 HILS1P60008 231 aa11.03□□□□□ -0.64
LRP8-202ENST00000347547 C10orf105Q8TEF2 133 aa11.03□□□□□ -0.64
LRP8-202ENST00000347547 UBE2E2Q96LR5 201 aa11.03□□□□□ -0.64
LRP8-202ENST00000347547 TMEM243Q9BU79 118 aa11.03□□□□□ -0.64
LRP8-202ENST00000347547 SLPIP03973 132 aa11.03□□□□□ -0.64
LRP8-202ENST00000347547 UBE2L6O14933 153 aa11.02□□□□□ -0.65
LRP8-202ENST00000347547 MAP6D1Q9H9H5 199 aa11.02□□□□□ -0.65
LRP8-202ENST00000347547 IGHV4-30-2A0A087WSY4 118 aa11.01□□□□□ -0.65
LRP8-202ENST00000347547 AVPP01185 164 aa11.01□□□□□ -0.65
LRP8-202ENST00000347547 FAM236DA0A1B0GTK5 79 aa11.01□□□□□ -0.65
LRP8-202ENST00000347547 MSMBP08118 114 aa11.01□□□□□ -0.65
LRP8-202ENST00000347547 FAM236CP0DP71 79 aa11.01□□□□□ -0.65
LRP8-202ENST00000347547 CHD6Q8TD26 2715 aa11□□□□□ -0.65
LRP8-202ENST00000347547 IGHV4-59P01825 116 aa11□□□□□ -0.65
LRP8-202ENST00000347547 CCL19Q99731 98 aa11□□□□□ -0.65
LRP8-202ENST00000347547 TOMM7Q9P0U1 55 aa11□□□□□ -0.65
LRP8-202ENST00000347547 SPG11Q96JI7 2443 aa11□□□□□ -0.65
LRP8-202ENST00000347547 SORL1Q92673 2214 aa10.99□□□□□ -0.65
LRP8-202ENST00000347547 TRAV23DV6A0A075B6W5 121 aa10.99□□□□□ -0.65
LRP8-202ENST00000347547 PAX4O43316 350 aa10.99□□□□□ -0.65
LRP8-202ENST00000347547 SERP1Q9Y6X1 66 aa10.99□□□□□ -0.65
LRP8-202ENST00000347547 CSPG4Q6UVK1 2322 aa10.99□□□□□ -0.65
LRP8-202ENST00000347547 FAM208BQ5VWN6 2430 aa10.99□□□□□ -0.65
LRP8-202ENST00000347547 TRGV1A0A0A0MS02 117 aa10.99□□□□□ -0.65
LRP8-202ENST00000347547 IGHV3OR16-9A0A0B4J2B5 98 aa10.99□□□□□ -0.65
LRP8-202ENST00000347547 XCL1P47992 114 aa10.99□□□□□ -0.65
LRP8-202ENST00000347547 FAM19A1Q7Z5A9 133 aa10.99□□□□□ -0.65
LRP8-202ENST00000347547 XCL2Q9UBD3 114 aa10.99□□□□□ -0.65
LRP8-202ENST00000347547 TMEM256-PLSCR3K7ERE1 68 aa10.98□□□□□ -0.65
LRP8-202ENST00000347547 TENM4Q6N022 2769 aa10.98□□□□□ -0.65
LRP8-202ENST00000347547 A0A087WZ39 114 aa10.97□□□□□ -0.65
LRP8-202ENST00000347547 ENHOQ6UWT2 76 aa10.97□□□□□ -0.65
LRP8-202ENST00000347547 C20orf197Q8N268 126 aa10.97□□□□□ -0.65
LRP8-202ENST00000347547 Q8N814 137 aa10.97□□□□□ -0.65
LRP8-202ENST00000347547 UBL5Q9BZL1 73 aa10.97□□□□□ -0.65
LRP8-202ENST00000347547 CENPEQ02224 2701 aa10.97□□□□□ -0.65
LRP8-202ENST00000347547 WFDC9Q8NEX5 89 aa10.96□□□□□ -0.65
LRP8-202ENST00000347547 CSMD2Q7Z408 3487 aa10.96□□□□□ -0.66
LRP8-202ENST00000347547 TRAV7A0A075B6U4 112 aa10.96□□□□□ -0.66
LRP8-202ENST00000347547 PFN2P35080 140 aa10.96□□□□□ -0.66
LRP8-202ENST00000347547 SLURP1P55000 103 aa10.96□□□□□ -0.66
LRP8-202ENST00000347547 USP9YO00507 2555 aaPredicted RBP10.95□□□□□ -0.66
LRP8-202ENST00000347547 H7BZZ5 65 aa10.95□□□□□ -0.66
LRP8-202ENST00000347547 DEFB112Q30KQ8 113 aa10.95□□□□□ -0.66
LRP8-202ENST00000347547 C1orf158Q8N1D5 194 aa10.95□□□□□ -0.66
LRP8-202ENST00000347547 A0A1W2PRX2 142 aa10.94□□□□□ -0.66
LRP8-202ENST00000347547 Q6ZTI0 123 aa10.94□□□□□ -0.66
LRP8-202ENST00000347547 ANKRD17O75179 2603 aaKnown RBP10.94□□□□□ -0.66
LRP8-202ENST00000347547 NANOS2P60321 138 aaKnown RBP10.93□□□□□ -0.66
LRP8-202ENST00000347547 KLKP1Q107X0 134 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms