RNA–Protein interactions for RNA: ENST00000345519.9

CLTA-202, Transcript of clathrin light chain A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLTA, Length 1,073 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-202ENST00000345519 C2orf66Q6UXQ4 117 aa12.58□□□□□ -0.4
CLTA-202ENST00000345519 PRSS3P2Q8NHM4 247 aa12.58□□□□□ -0.4
CLTA-202ENST00000345519 TMEM141Q96I45 108 aa12.58□□□□□ -0.4
CLTA-202ENST00000345519 CARD19Q96LW7 228 aa12.58□□□□□ -0.4
CLTA-202ENST00000345519 CYSLTR1Q9Y271 337 aa12.58□□□□□ -0.4
CLTA-202ENST00000345519 IGIPA6NJ69 53 aa12.57□□□□□ -0.4
CLTA-202ENST00000345519 IFITM10A6NMD0 228 aa12.57□□□□□ -0.4
CLTA-202ENST00000345519 ZNF561-AS1K7EIQ3 104 aa12.57□□□□□ -0.4
CLTA-202ENST00000345519 MT-ND6P03923 174 aa12.57□□□□□ -0.4
CLTA-202ENST00000345519 LINC00173Q6ZV60 143 aa12.57□□□□□ -0.4
CLTA-202ENST00000345519 OR10D4PQ8NGN7 298 aa12.57□□□□□ -0.4
CLTA-202ENST00000345519 LINC00526Q96FQ7 95 aa12.57□□□□□ -0.4
CLTA-202ENST00000345519 C2orf48Q96LS8 159 aa12.57□□□□□ -0.4
CLTA-202ENST00000345519 AMELXQ99217 191 aa12.57□□□□□ -0.4
CLTA-202ENST00000345519 PKIGQ9Y2B9 76 aa12.57□□□□□ -0.4
CLTA-202ENST00000345519 IGLV4-69A0A075B6H9 119 aa12.56□□□□□ -0.4
CLTA-202ENST00000345519 A0A087WYN8 130 aa12.56□□□□□ -0.4
CLTA-202ENST00000345519 MALP21145 153 aa12.56□□□□□ -0.4
CLTA-202ENST00000345519 SYCNQ0VAF6 134 aa12.56□□□□□ -0.4
CLTA-202ENST00000345519 FAM19A3Q7Z5A8 133 aa12.56□□□□□ -0.4
CLTA-202ENST00000345519 APOMO95445 188 aa12.55□□□□□ -0.4
CLTA-202ENST00000345519 KIAA1644Q3SXP7 199 aa12.55□□□□□ -0.4
CLTA-202ENST00000345519 LINC00242Q5T6M2 205 aa12.55□□□□□ -0.4
CLTA-202ENST00000345519 ALKBH7Q9BT30 221 aaPredicted RBP12.55□□□□□ -0.4
CLTA-202ENST00000345519 A0A096LNI7 61 aa12.54□□□□□ -0.4
CLTA-202ENST00000345519 C5orf38Q86SI9 138 aa12.54□□□□□ -0.4
CLTA-202ENST00000345519 RPS10P5Q9NQ39 176 aa12.54□□□□□ -0.4
CLTA-202ENST00000345519 A0A087WZ39 114 aa12.53□□□□□ -0.4
CLTA-202ENST00000345519 F8WDY8 70 aa12.53□□□□□ -0.4
CLTA-202ENST00000345519 G0S2P27469 103 aa12.53□□□□□ -0.4
CLTA-202ENST00000345519 UBE2D1P51668 147 aa12.53□□□□□ -0.4
CLTA-202ENST00000345519 TEX43Q6ZNM6 134 aa12.53□□□□□ -0.4
CLTA-202ENST00000345519 Q6ZRU5 148 aa12.53□□□□□ -0.4
CLTA-202ENST00000345519 TIMM17AQ99595 171 aa12.53□□□□□ -0.4
CLTA-202ENST00000345519 LINC00474Q9P2X8 69 aa12.53□□□□□ -0.4
CLTA-202ENST00000345519 TOMM6Q96B49 74 aa12.52□□□□□ -0.41
CLTA-202ENST00000345519 RPL37AP61513 92 aaKnown RBP12.51□□□□□ -0.41
CLTA-202ENST00000345519 SPAG11BQ08648 103 aa12.51□□□□□ -0.41
CLTA-202ENST00000345519 RNF151Q2KHN1 245 aa12.51□□□□□ -0.41
CLTA-202ENST00000345519 LINC01561Q8N1V8 128 aa12.51□□□□□ -0.41
CLTA-202ENST00000345519 SVBPQ8N300 66 aa12.51□□□□□ -0.41
CLTA-202ENST00000345519 MRPL18Q9H0U6 180 aaKnown RBP12.5□□□□□ -0.41
CLTA-202ENST00000345519 TGIF2-C20orf24A0A0A6YYL0 155 aa12.49□□□□□ -0.41
CLTA-202ENST00000345519 LINC01549A6NIU2 74 aa12.49□□□□□ -0.41
CLTA-202ENST00000345519 SNAPINO95295 136 aa12.49□□□□□ -0.41
CLTA-202ENST00000345519 Q6ZN92 141 aa12.49□□□□□ -0.41
CLTA-202ENST00000345519 CAMK2N2Q96S95 79 aa12.49□□□□□ -0.41
CLTA-202ENST00000345519 C2orf88Q9BSF0 95 aa12.49□□□□□ -0.41
CLTA-202ENST00000345519 MRPL35Q9NZE8 188 aaKnown RBP12.49□□□□□ -0.41
CLTA-202ENST00000345519 IGKV2-24A0A0C4DH68 120 aa12.48□□□□□ -0.41
CLTA-202ENST00000345519 APOC3P02656 99 aa12.48□□□□□ -0.41
CLTA-202ENST00000345519 PTTG1IPP53801 180 aa12.48□□□□□ -0.41
CLTA-202ENST00000345519 KIAA0087Q14695 138 aa12.48□□□□□ -0.41
CLTA-202ENST00000345519 ORAOV1Q8WV07 137 aa12.48□□□□□ -0.41
CLTA-202ENST00000345519 LOC107984640A0A0U1RRK4 108 aa12.47□□□□□ -0.41
CLTA-202ENST00000345519 KRTAP29-1A8MX34 341 aaPredicted RBP12.47□□□□□ -0.41
CLTA-202ENST00000345519 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.47□□□□□ -0.41
CLTA-202ENST00000345519 NDUFA5Q16718 116 aa12.47□□□□□ -0.41
CLTA-202ENST00000345519 MAJINQ3KP22 176 aa12.47□□□□□ -0.41
CLTA-202ENST00000345519 PAPPA-AS1Q5QFB9 102 aa12.47□□□□□ -0.41
CLTA-202ENST00000345519 ERASQ7Z444 233 aa12.47□□□□□ -0.41
CLTA-202ENST00000345519 YPEL4Q96NS1 127 aa12.47□□□□□ -0.41
CLTA-202ENST00000345519 VCX2Q9H322 139 aa12.47□□□□□ -0.41
CLTA-202ENST00000345519 STPG4Q8N801 248 aa12.46□□□□□ -0.41
CLTA-202ENST00000345519 TLX1NBP0CAT3 122 aa12.45□□□□□ -0.42
CLTA-202ENST00000345519 HNRNPA3P51991 378 aaKnown RBP12.45□□□□□ -0.42
CLTA-202ENST00000345519 ZC2HC1BQ5TFG8 222 aa12.45□□□□□ -0.42
CLTA-202ENST00000345519 FABP9Q0Z7S8 132 aa12.44□□□□□ -0.42
CLTA-202ENST00000345519 NDUFA1O15239 70 aa12.43□□□□□ -0.42
CLTA-202ENST00000345519 HERVK_113P63121 156 aa12.42□□□□□ -0.42
CLTA-202ENST00000345519 SEC11AP67812 179 aa12.42□□□□□ -0.42
CLTA-202ENST00000345519 C18orf32Q8TCD1 76 aa12.42□□□□□ -0.42
CLTA-202ENST00000345519 URB1-AS1Q96HZ7 61 aa12.42□□□□□ -0.42
CLTA-202ENST00000345519 A0A096LNJ9 63 aa12.41□□□□□ -0.42
CLTA-202ENST00000345519 C10orf25Q5T742 122 aa12.41□□□□□ -0.42
CLTA-202ENST00000345519 C7orf33Q8WU49 177 aa12.41□□□□□ -0.42
CLTA-202ENST00000345519 DPH3Q96FX2 82 aa12.41□□□□□ -0.42
CLTA-202ENST00000345519 TRAPPC1Q9Y5R8 145 aa12.41□□□□□ -0.42
CLTA-202ENST00000345519 SCGB3A1Q96QR1 104 aa12.4□□□□□ -0.42
CLTA-202ENST00000345519 C6orf48Q9UBA6 75 aa12.4□□□□□ -0.42
CLTA-202ENST00000345519 IGLV5-45A0A087WSX0 123 aa12.39□□□□□ -0.43
CLTA-202ENST00000345519 OXTP01178 125 aa12.39□□□□□ -0.43
CLTA-202ENST00000345519 TRBV30A0A0K0K1B3 111 aa12.38□□□□□ -0.43
CLTA-202ENST00000345519 UNQ6190/PRO20217Q6UXQ8 127 aa12.38□□□□□ -0.43
CLTA-202ENST00000345519 FA2HQ7L5A8 372 aa12.38□□□□□ -0.43
CLTA-202ENST00000345519 A0A0J9YXV3 536 aa12.37□□□□□ -0.43
CLTA-202ENST00000345519 PRR3P79522 188 aaKnown RBP12.37□□□□□ -0.43
CLTA-202ENST00000345519 GAGE2BQ13066 116 aa12.37□□□□□ -0.43
CLTA-202ENST00000345519 Q8IZM0 81 aa12.37□□□□□ -0.43
CLTA-202ENST00000345519 SMCO4Q9NRQ5 59 aa12.37□□□□□ -0.43
CLTA-202ENST00000345519 CDKN2A-AS1Q9UH64 79 aa12.37□□□□□ -0.43
CLTA-202ENST00000345519 TINCRA0A1B0GVN0 87 aa12.36□□□□□ -0.43
CLTA-202ENST00000345519 Q6ZRP5 223 aa12.36□□□□□ -0.43
CLTA-202ENST00000345519 TNXBP22105 4242 aa12.35□□□□□ -0.43
CLTA-202ENST00000345519 A0A1W2PNN7 141 aa12.35□□□□□ -0.43
CLTA-202ENST00000345519 LINC00614P0C842 121 aa12.35□□□□□ -0.43
CLTA-202ENST00000345519 RPL18AQ02543 176 aaKnown RBP12.35□□□□□ -0.43
CLTA-202ENST00000345519 CST9LQ9H4G1 147 aa12.35□□□□□ -0.43
CLTA-202ENST00000345519 SMIM1B2RUZ4 78 aa12.33□□□□□ -0.44
CLTA-202ENST00000345519 PMVKQ15126 192 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms