RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 NDUFC2O95298 119 aa10.93□□□□□ -0.66
UBE3B-202ENST00000342494 MAPKAPK5-AS1Q8N8E1 139 aa10.93□□□□□ -0.66
UBE3B-202ENST00000342494 ENHOQ6UWT2 76 aa10.93□□□□□ -0.66
UBE3B-202ENST00000342494 NRACQ8N912 160 aa10.93□□□□□ -0.66
UBE3B-202ENST00000342494 TIMM17BO60830 172 aa10.92□□□□□ -0.66
UBE3B-202ENST00000342494 C3orf22Q8N5N4 141 aa10.92□□□□□ -0.66
UBE3B-202ENST00000342494 ATP5EP2Q5VTU8 51 aa10.91□□□□□ -0.66
UBE3B-202ENST00000342494 CYSRT1A8MQ03 144 aa10.91□□□□□ -0.66
UBE3B-202ENST00000342494 J3KT08 172 aa10.91□□□□□ -0.66
UBE3B-202ENST00000342494 EDN2P20800 178 aa10.91□□□□□ -0.66
UBE3B-202ENST00000342494 POLR2KP53803 58 aaKnown RBP10.91□□□□□ -0.66
UBE3B-202ENST00000342494 KIAA1549Q9HCM3 1950 aa10.91□□□□□ -0.66
UBE3B-202ENST00000342494 PCNX3Q9H6A9 2034 aa10.91□□□□□ -0.66
UBE3B-202ENST00000342494 TRBV30A0A0K0K1B3 111 aa10.9□□□□□ -0.66
UBE3B-202ENST00000342494 COX17Q14061 63 aa10.9□□□□□ -0.66
UBE3B-202ENST00000342494 ZNF73O43830 326 aaPredicted RBP10.9□□□□□ -0.66
UBE3B-202ENST00000342494 C20orf197Q8N268 126 aa10.9□□□□□ -0.66
UBE3B-202ENST00000342494 Q8IZM0 81 aa10.89□□□□□ -0.67
UBE3B-202ENST00000342494 K7ERS5 55 aa10.89□□□□□ -0.67
UBE3B-202ENST00000342494 CDC42SE2Q9NRR3 84 aa10.89□□□□□ -0.67
UBE3B-202ENST00000342494 IGLV5-52A0A0A0MRZ9 124 aa10.89□□□□□ -0.67
UBE3B-202ENST00000342494 Q6ZTC4 211 aa10.89□□□□□ -0.67
UBE3B-202ENST00000342494 WFDC13Q8IUB5 93 aa10.88□□□□□ -0.67
UBE3B-202ENST00000342494 C16orf95Q9H693 158 aa10.88□□□□□ -0.67
UBE3B-202ENST00000342494 RPL28P46779 137 aaKnown RBP10.88□□□□□ -0.67
UBE3B-202ENST00000342494 M0QXV9 152 aa10.88□□□□□ -0.67
UBE3B-202ENST00000342494 CHCHD7Q9BUK0 85 aa10.88□□□□□ -0.67
UBE3B-202ENST00000342494 CEP192Q8TEP8 1941 aa10.88□□□□□ -0.67
UBE3B-202ENST00000342494 TANC2Q9HCD6 1990 aa10.88□□□□□ -0.67
UBE3B-202ENST00000342494 TLN1Q9Y490 2541 aaKnown RBP10.87□□□□□ -0.67
UBE3B-202ENST00000342494 RNASE8Q8TDE3 154 aaKnown RBP10.87□□□□□ -0.67
UBE3B-202ENST00000342494 A0A1W2PPR1 153 aa10.87□□□□□ -0.67
UBE3B-202ENST00000342494 G3V4G9 280 aa10.87□□□□□ -0.67
UBE3B-202ENST00000342494 MUC7Q8TAX7 377 aa10.87□□□□□ -0.67
UBE3B-202ENST00000342494 ZFYVE26Q68DK2 2539 aa10.87□□□□□ -0.67
UBE3B-202ENST00000342494 NUP210LQ5VU65 1888 aa10.86□□□□□ -0.67
UBE3B-202ENST00000342494 SMIM11BQ8TCY0 68 aa10.85□□□□□ -0.67
UBE3B-202ENST00000342494 TP73-AS1Q9UF72 201 aa10.85□□□□□ -0.67
UBE3B-202ENST00000342494 UNQ6190/PRO20217Q6UXQ8 127 aa10.85□□□□□ -0.67
UBE3B-202ENST00000342494 ARHGAP32A7KAX9 2087 aa10.84□□□□□ -0.67
UBE3B-202ENST00000342494 EGFEM1PQ0D2K5 195 aa10.84□□□□□ -0.67
UBE3B-202ENST00000342494 SVIPQ8NHG7 77 aa10.84□□□□□ -0.67
UBE3B-202ENST00000342494 C10orf142B7Z368 130 aa10.84□□□□□ -0.67
UBE3B-202ENST00000342494 FSHBP01225 129 aa10.84□□□□□ -0.67
UBE3B-202ENST00000342494 CRIP2P52943 208 aaPredicted RBP10.84□□□□□ -0.67
UBE3B-202ENST00000342494 C6orf223Q8N319 242 aa10.84□□□□□ -0.67
UBE3B-202ENST00000342494 C10orf25Q5T742 122 aa10.83□□□□□ -0.67
UBE3B-202ENST00000342494 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.82□□□□□ -0.68
UBE3B-202ENST00000342494 GAS8-AS1O95177 125 aa10.82□□□□□ -0.68
UBE3B-202ENST00000342494 C1orf134Q5TEV5 83 aa10.82□□□□□ -0.68
UBE3B-202ENST00000342494 SPTSSBQ8NFR3 76 aa10.81□□□□□ -0.68
UBE3B-202ENST00000342494 ABCA12Q86UK0 2595 aa10.81□□□□□ -0.68
UBE3B-202ENST00000342494 CIRBP-AS1Q8TBR5 109 aa10.81□□□□□ -0.68
UBE3B-202ENST00000342494 POM121L12Q8N7R1 296 aa10.8□□□□□ -0.68
UBE3B-202ENST00000342494 LINC00242Q5T6M2 205 aa10.8□□□□□ -0.68
UBE3B-202ENST00000342494 Q8N9L7 120 aa10.8□□□□□ -0.68
UBE3B-202ENST00000342494 CHD8Q9HCK8 2581 aa10.8□□□□□ -0.68
UBE3B-202ENST00000342494 FHL2Q14192 279 aa10.79□□□□□ -0.68
UBE3B-202ENST00000342494 NDUFV3P56181 108 aaKnown RBP10.79□□□□□ -0.68
UBE3B-202ENST00000342494 CNFNQ9BYD5 112 aa10.79□□□□□ -0.68
UBE3B-202ENST00000342494 PRR15LQ9BU68 103 aa10.79□□□□□ -0.68
UBE3B-202ENST00000342494 REG3GQ6UW15 175 aa10.78□□□□□ -0.68
UBE3B-202ENST00000342494 FAM19A3Q7Z5A8 133 aa10.78□□□□□ -0.68
UBE3B-202ENST00000342494 C9orf116Q5BN46 136 aaPredicted RBP10.78□□□□□ -0.68
UBE3B-202ENST00000342494 MPLKIPQ8TAP9 179 aa10.78□□□□□ -0.68
UBE3B-202ENST00000342494 BRK1Q8WUW1 75 aa10.78□□□□□ -0.68
UBE3B-202ENST00000342494 MT-ATP8P03928 68 aa10.77□□□□□ -0.68
UBE3B-202ENST00000342494 FAM236DA0A1B0GTK5 79 aa10.77□□□□□ -0.68
UBE3B-202ENST00000342494 LST1O00453 97 aa10.77□□□□□ -0.68
UBE3B-202ENST00000342494 FAM236CP0DP71 79 aa10.77□□□□□ -0.68
UBE3B-202ENST00000342494 MUC22E2RYF6 1773 aaPredicted RBP10.77□□□□□ -0.69
UBE3B-202ENST00000342494 MRPS12O15235 138 aaKnown RBP10.77□□□□□ -0.69
UBE3B-202ENST00000342494 UQCRQO14949 82 aa10.77□□□□□ -0.69
UBE3B-202ENST00000342494 ZNF580Q9UK33 172 aa10.77□□□□□ -0.69
UBE3B-202ENST00000342494 SERP1Q9Y6X1 66 aa10.77□□□□□ -0.69
UBE3B-202ENST00000342494 IGLV4-60A0A075B6I1 120 aa10.77□□□□□ -0.69
UBE3B-202ENST00000342494 NHLRC4P0CG21 123 aaPredicted RBP10.77□□□□□ -0.69
UBE3B-202ENST00000342494 LINC01556Q5JQF7 62 aa10.76□□□□□ -0.69
UBE3B-202ENST00000342494 IGIPA6NJ69 53 aa10.76□□□□□ -0.69
UBE3B-202ENST00000342494 C1orf137Q5JT78 98 aa10.75□□□□□ -0.69
UBE3B-202ENST00000342494 TRBV10-3A0A0K0K1G6 114 aa10.75□□□□□ -0.69
UBE3B-202ENST00000342494 SMIM1B2RUZ4 78 aa10.74□□□□□ -0.69
UBE3B-202ENST00000342494 LRRK2Q5S007 2527 aa10.74□□□□□ -0.69
UBE3B-202ENST00000342494 TLN2Q9Y4G6 2542 aa10.74□□□□□ -0.69
UBE3B-202ENST00000342494 COX6A2Q02221 97 aa10.73□□□□□ -0.69
UBE3B-202ENST00000342494 HCFC1P51610 2035 aa10.73□□□□□ -0.69
UBE3B-202ENST00000342494 ZNF462Q96JM2 2506 aa10.73□□□□□ -0.69
UBE3B-202ENST00000342494 LINC00694P0DN24 101 aa10.73□□□□□ -0.69
UBE3B-202ENST00000342494 Q6ZVQ6 151 aa10.72□□□□□ -0.69
UBE3B-202ENST00000342494 FN1P02751 2386 aaKnown RBP10.71□□□□□ -0.69
UBE3B-202ENST00000342494 LYPD5Q6UWN5 251 aa10.71□□□□□ -0.69
UBE3B-202ENST00000342494 MRPL55Q7Z7F7 128 aaKnown RBP10.71□□□□□ -0.69
UBE3B-202ENST00000342494 NTM-AS1Q6ZSK4 140 aa10.71□□□□□ -0.7
UBE3B-202ENST00000342494 PRR4Q16378 134 aa10.71□□□□□ -0.7
UBE3B-202ENST00000342494 LRP4O75096 1905 aa10.7□□□□□ -0.7
UBE3B-202ENST00000342494 USP9XQ93008 2570 aaPredicted RBP10.7□□□□□ -0.7
UBE3B-202ENST00000342494 NDUFC2-KCTD14E9PQ53 114 aa10.69□□□□□ -0.7
UBE3B-202ENST00000342494 ESRGQ1W209 222 aa10.69□□□□□ -0.7
UBE3B-202ENST00000342494 SNURFQ9Y675 71 aa10.69□□□□□ -0.7
UBE3B-202ENST00000342494 FHL3Q13643 280 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms