RNA–Protein interactions for RNA: ENST00000342075.8

PMS1-201, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 3,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-201ENST00000342075 DNAH10OSP0CZ25 163 aa9.35□□□□□ -0.91
PMS1-201ENST00000342075 PLNP26678 52 aa9.35□□□□□ -0.91
PMS1-201ENST00000342075 NPSP0C0P6 89 aa9.34□□□□□ -0.91
PMS1-201ENST00000342075 SPATA45Q537H7 98 aa9.34□□□□□ -0.91
PMS1-201ENST00000342075 TRAV9-2A0A087WT02 112 aa9.34□□□□□ -0.91
PMS1-201ENST00000342075 C5orf38Q86SI9 138 aa9.34□□□□□ -0.91
PMS1-201ENST00000342075 NFE4Q86UQ8 179 aa9.34□□□□□ -0.91
PMS1-201ENST00000342075 SMAGPQ0VAQ4 97 aa9.34□□□□□ -0.91
PMS1-201ENST00000342075 GEMIN7Q9H840 131 aaKnown RBP9.34□□□□□ -0.91
PMS1-201ENST00000342075 PRR34Q9NV39 138 aa9.34□□□□□ -0.91
PMS1-201ENST00000342075 TINCRA0A1B0GVN0 87 aa9.33□□□□□ -0.92
PMS1-201ENST00000342075 C14orf144Q96I85 54 aa9.33□□□□□ -0.92
PMS1-201ENST00000342075 UPK3BQ9BT76 320 aa9.33□□□□□ -0.92
PMS1-201ENST00000342075 CHCHD10Q8WYQ3 142 aaPredicted RBP9.33□□□□□ -0.92
PMS1-201ENST00000342075 DNAH2Q9P225 4427 aa9.32□□□□□ -0.92
PMS1-201ENST00000342075 CRPP02741 224 aa9.32□□□□□ -0.92
PMS1-201ENST00000342075 TSPEAR-AS2P59090 65 aa9.32□□□□□ -0.92
PMS1-201ENST00000342075 M0R2N4 97 aa9.31□□□□□ -0.92
PMS1-201ENST00000342075 NMUP48645 174 aa9.31□□□□□ -0.92
PMS1-201ENST00000342075 PCP2Q8IVA1 136 aa9.31□□□□□ -0.92
PMS1-201ENST00000342075 IGHV3OR16-9A0A0B4J2B5 98 aa9.3□□□□□ -0.92
PMS1-201ENST00000342075 S100A12P80511 92 aa9.3□□□□□ -0.92
PMS1-201ENST00000342075 TMEM223A0PJW6 202 aa9.3□□□□□ -0.92
PMS1-201ENST00000342075 GAGE12HA6NDE8 117 aa9.3□□□□□ -0.92
PMS1-201ENST00000342075 SS18Q15532 418 aa9.3□□□□□ -0.92
PMS1-201ENST00000342075 HERVK_113P63121 156 aa9.29□□□□□ -0.92
PMS1-201ENST00000342075 FAM19A3Q7Z5A8 133 aa9.29□□□□□ -0.92
PMS1-201ENST00000342075 IGKV2D-24A0A075B6R9 120 aa9.29□□□□□ -0.92
PMS1-201ENST00000342075 IGLV5-45A0A087WSX0 123 aa9.29□□□□□ -0.92
PMS1-201ENST00000342075 LY6G6CO95867 125 aa9.29□□□□□ -0.92
PMS1-201ENST00000342075 PKIAP61925 76 aa9.29□□□□□ -0.92
PMS1-201ENST00000342075 FOXI1Q12951 378 aa9.29□□□□□ -0.92
PMS1-201ENST00000342075 SMIM1B2RUZ4 78 aa9.28□□□□□ -0.92
PMS1-201ENST00000342075 HSBP1L1C9JCN9 74 aa9.28□□□□□ -0.92
PMS1-201ENST00000342075 LINC00526Q96FQ7 95 aa9.28□□□□□ -0.92
PMS1-201ENST00000342075 MAPKAPK5-AS1Q8N8E1 139 aa9.28□□□□□ -0.92
PMS1-201ENST00000342075 PCP4L1A6NKN8 68 aa9.27□□□□□ -0.93
PMS1-201ENST00000342075 KRTAP26-1Q6PEX3 210 aa9.27□□□□□ -0.93
PMS1-201ENST00000342075 KMT2CQ8NEZ4 4911 aaKnown RBP9.27□□□□□ -0.93
PMS1-201ENST00000342075 ALMS1Q8TCU4 4167 aa9.27□□□□□ -0.93
PMS1-201ENST00000342075 IBA57-AS1B1ANH7 110 aa9.26□□□□□ -0.93
PMS1-201ENST00000342075 MIAQ16674 131 aa9.26□□□□□ -0.93
PMS1-201ENST00000342075 CD164L2Q6UWJ8 174 aa9.26□□□□□ -0.93
PMS1-201ENST00000342075 TOMM7Q9P0U1 55 aa9.26□□□□□ -0.93
PMS1-201ENST00000342075 SACSQ9NZJ4 4579 aa9.25□□□□□ -0.93
PMS1-201ENST00000342075 E9PLD3 99 aa9.25□□□□□ -0.93
PMS1-201ENST00000342075 LECT2O14960 151 aa9.25□□□□□ -0.93
PMS1-201ENST00000342075 A0A087WZ39 114 aa9.24□□□□□ -0.93
PMS1-201ENST00000342075 C1orf43Q9BWL3 253 aa9.24□□□□□ -0.93
PMS1-201ENST00000342075 NBDYA0A0U1RRE5 68 aa9.24□□□□□ -0.93
PMS1-201ENST00000342075 SEC11AP67812 179 aa9.24□□□□□ -0.93
PMS1-201ENST00000342075 LINC00476Q8WZB0 136 aa9.23□□□□□ -0.93
PMS1-201ENST00000342075 IGHV1-58A0A0C4DH39 117 aa9.23□□□□□ -0.93
PMS1-201ENST00000342075 C3orf84H3BNL1 204 aa9.23□□□□□ -0.93
PMS1-201ENST00000342075 COX7A2LO14548 114 aa9.23□□□□□ -0.93
PMS1-201ENST00000342075 J3QQQ9 107 aa9.23□□□□□ -0.93
PMS1-201ENST00000342075 H3BRM9 83 aa9.22□□□□□ -0.93
PMS1-201ENST00000342075 HIGD2BQ4VC39 106 aa9.22□□□□□ -0.93
PMS1-201ENST00000342075 C6orf223Q8N319 242 aa9.22□□□□□ -0.93
PMS1-201ENST00000342075 PLEKHB2Q96CS7 222 aa9.22□□□□□ -0.93
PMS1-201ENST00000342075 ZNF625Q96I27 306 aaPredicted RBP9.22□□□□□ -0.93
PMS1-201ENST00000342075 FRAS1Q86XX4 4008 aa9.22□□□□□ -0.93
PMS1-201ENST00000342075 IGLV5-39A0A0G2JS06 123 aa9.22□□□□□ -0.93
PMS1-201ENST00000342075 MALP21145 153 aa9.22□□□□□ -0.93
PMS1-201ENST00000342075 HERVK_113P61574 105 aa9.22□□□□□ -0.93
PMS1-201ENST00000342075 C2orf82Q6UX34 121 aa9.22□□□□□ -0.93
PMS1-201ENST00000342075 TRAV8-4A0A0B4J246 113 aa9.21□□□□□ -0.93
PMS1-201ENST00000342075 COX8AP10176 69 aa9.21□□□□□ -0.93
PMS1-201ENST00000342075 WFDC2Q14508 124 aa9.21□□□□□ -0.93
PMS1-201ENST00000342075 C10orf126Q8N4M7 172 aa9.21□□□□□ -0.94
PMS1-201ENST00000342075 LEPROTO15243 131 aa9.21□□□□□ -0.94
PMS1-201ENST00000342075 ORAOV1Q8WV07 137 aa9.21□□□□□ -0.94
PMS1-201ENST00000342075 ZNF815PA8K554 130 aa9.2□□□□□ -0.94
PMS1-201ENST00000342075 DNAH6Q9C0G6 4158 aa9.2□□□□□ -0.94
PMS1-201ENST00000342075 LGALS3P17931 250 aaKnown RBP9.19□□□□□ -0.94
PMS1-201ENST00000342075 C15orf56Q8N910 161 aa9.19□□□□□ -0.94
PMS1-201ENST00000342075 BOD1L2Q8IYS8 172 aa9.19□□□□□ -0.94
PMS1-201ENST00000342075 COX7B2Q8TF08 81 aa9.18□□□□□ -0.94
PMS1-201ENST00000342075 A0A0U1RRA0 63 aa9.18□□□□□ -0.94
PMS1-201ENST00000342075 SLC25A34Q6PIV7 304 aa9.18□□□□□ -0.94
PMS1-201ENST00000342075 C2orf91Q6ZV80 131 aa9.18□□□□□ -0.94
PMS1-201ENST00000342075 TSTD3H0UI37 97 aa9.18□□□□□ -0.94
PMS1-201ENST00000342075 NDUFA12Q9UI09 145 aa9.18□□□□□ -0.94
PMS1-201ENST00000342075 KIAA0087Q14695 138 aa9.17□□□□□ -0.94
PMS1-201ENST00000342075 MYMXA0A1B0GTQ4 84 aa9.17□□□□□ -0.94
PMS1-201ENST00000342075 C10orf25Q5T742 122 aa9.17□□□□□ -0.94
PMS1-201ENST00000342075 HECTD4Q9Y4D8 3996 aa9.16□□□□□ -0.94
PMS1-201ENST00000342075 SPAG11BQ08648 103 aa9.16□□□□□ -0.94
PMS1-201ENST00000342075 MIEN1Q9BRT3 115 aa9.16□□□□□ -0.94
PMS1-201ENST00000342075 UQCR10Q9UDW1 63 aa9.16□□□□□ -0.94
PMS1-201ENST00000342075 C9orf116Q5BN46 136 aaPredicted RBP9.15□□□□□ -0.94
PMS1-201ENST00000342075 Q6ZR54 194 aa9.15□□□□□ -0.94
PMS1-201ENST00000342075 DAND5Q8N907 189 aa9.15□□□□□ -0.94
PMS1-201ENST00000342075 USP17L23D6RBM5 183 aa9.15□□□□□ -0.94
PMS1-201ENST00000342075 C6orf226Q5I0X4 101 aa9.15□□□□□ -0.94
PMS1-201ENST00000342075 Q6ZRN7 208 aaPredicted RBP9.15□□□□□ -0.94
PMS1-201ENST00000342075 PSCAO43653 123 aa9.15□□□□□ -0.95
PMS1-201ENST00000342075 FUSP35637 526 aaKnown RBP eCLIP9.15□□□□□ -0.95
PMS1-201ENST00000342075 DDTP30046 118 aa9.14□□□□□ -0.95
PMS1-201ENST00000342075 TTC32Q5I0X7 151 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 181.4 ms