RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 PDE6DO43924 150 aa9.45□□□□□ -0.9
NECTIN1-202ENST00000340882 VCYO14598 125 aa9.44□□□□□ -0.9
NECTIN1-202ENST00000340882 LINC01547P58512 204 aaPredicted RBP9.44□□□□□ -0.9
NECTIN1-202ENST00000340882 ZNF345Q14585 488 aa9.44□□□□□ -0.9
NECTIN1-202ENST00000340882 C2orf82Q6UX34 121 aa9.44□□□□□ -0.9
NECTIN1-202ENST00000340882 AMN1Q8IY45 258 aa9.44□□□□□ -0.9
NECTIN1-202ENST00000340882 NUPR1O60356 82 aa9.43□□□□□ -0.9
NECTIN1-202ENST00000340882 RPL39P62891 51 aaKnown RBP9.43□□□□□ -0.9
NECTIN1-202ENST00000340882 LINC00173Q6ZV60 143 aa9.43□□□□□ -0.9
NECTIN1-202ENST00000340882 NRACQ8N912 160 aa9.43□□□□□ -0.9
NECTIN1-202ENST00000340882 TIMM21Q9BVV7 248 aa9.43□□□□□ -0.9
NECTIN1-202ENST00000340882 TMEM191AQ9H0A3 160 aa9.43□□□□□ -0.9
NECTIN1-202ENST00000340882 C22orf24Q9Y442 160 aa9.43□□□□□ -0.9
NECTIN1-202ENST00000340882 NDUFC2-KCTD14E9PQ53 114 aa9.42□□□□□ -0.9
NECTIN1-202ENST00000340882 GATCO43716 136 aaKnown RBP9.41□□□□□ -0.9
NECTIN1-202ENST00000340882 SRSF3P84103 164 aaKnown RBP9.41□□□□□ -0.9
NECTIN1-202ENST00000340882 LINC00304Q8N9R0 145 aa9.41□□□□□ -0.9
NECTIN1-202ENST00000340882 SUMO2P61956 95 aaKnown RBP9.4□□□□□ -0.9
NECTIN1-202ENST00000340882 SMAGPQ0VAQ4 97 aa9.4□□□□□ -0.9
NECTIN1-202ENST00000340882 LINC00242Q5T6M2 205 aa9.4□□□□□ -0.9
NECTIN1-202ENST00000340882 LINC00469Q8N7U9 141 aa9.4□□□□□ -0.9
NECTIN1-202ENST00000340882 TRBV30A0A0K0K1B3 111 aa9.39□□□□□ -0.91
NECTIN1-202ENST00000340882 PPDPFQ9H3Y8 114 aa9.39□□□□□ -0.91
NECTIN1-202ENST00000340882 KANTRA0A1W2PQU2 76 aa9.38□□□□□ -0.91
NECTIN1-202ENST00000340882 A8MWL6 223 aa9.38□□□□□ -0.91
NECTIN1-202ENST00000340882 RPL28P46779 137 aaKnown RBP9.38□□□□□ -0.91
NECTIN1-202ENST00000340882 KIR2DL4Q99706 377 aa9.38□□□□□ -0.91
NECTIN1-202ENST00000340882 A0A1B0GUT8 65 aa9.37□□□□□ -0.91
NECTIN1-202ENST00000340882 BCE1O60756 84 aa9.37□□□□□ -0.91
NECTIN1-202ENST00000340882 IFITM10A6NMD0 228 aa9.36□□□□□ -0.91
NECTIN1-202ENST00000340882 FAM231DQ6ZW35 169 aa9.36□□□□□ -0.91
NECTIN1-202ENST00000340882 XAGE1AQ9HD64 81 aa9.36□□□□□ -0.91
NECTIN1-202ENST00000340882 HMSDA8MTL9 139 aa9.35□□□□□ -0.91
NECTIN1-202ENST00000340882 HIGD1CA8MV81 97 aa9.35□□□□□ -0.91
NECTIN1-202ENST00000340882 TMEM18Q96B42 140 aa9.35□□□□□ -0.91
NECTIN1-202ENST00000340882 BORCS7Q96B45 105 aa9.35□□□□□ -0.91
NECTIN1-202ENST00000340882 PACRGQ96M98 296 aaPredicted RBP9.35□□□□□ -0.91
NECTIN1-202ENST00000340882 ZNF727A8MUV8 499 aa9.34□□□□□ -0.91
NECTIN1-202ENST00000340882 ASB16-AS1Q495Z4 193 aa9.34□□□□□ -0.91
NECTIN1-202ENST00000340882 LBHQ53QV2 105 aaPredicted RBP9.34□□□□□ -0.91
NECTIN1-202ENST00000340882 TGIF2-C20orf24A0A0A6YYL0 155 aa9.33□□□□□ -0.92
NECTIN1-202ENST00000340882 TEX46H3BTG2 121 aa9.33□□□□□ -0.92
NECTIN1-202ENST00000340882 HBBP68871 147 aa9.33□□□□□ -0.92
NECTIN1-202ENST00000340882 MRPS36P82909 103 aaKnown RBP9.33□□□□□ -0.92
NECTIN1-202ENST00000340882 CT83Q5H943 113 aa9.33□□□□□ -0.92
NECTIN1-202ENST00000340882 MRPL55Q7Z7F7 128 aaKnown RBP9.33□□□□□ -0.92
NECTIN1-202ENST00000340882 KRTAP13-1Q8IUC0 172 aa9.33□□□□□ -0.92
NECTIN1-202ENST00000340882 RPL37AP8A6NKH3 93 aa9.32□□□□□ -0.92
NECTIN1-202ENST00000340882 LCE2CQ5TA81 110 aa9.32□□□□□ -0.92
NECTIN1-202ENST00000340882 SPANXA1Q9NS26 97 aa9.32□□□□□ -0.92
NECTIN1-202ENST00000340882 FAM229BQ4G0N7 80 aa9.31□□□□□ -0.92
NECTIN1-202ENST00000340882 MRPL51Q4U2R6 128 aaKnown RBP9.31□□□□□ -0.92
NECTIN1-202ENST00000340882 PPP1R2P9O14990 202 aa9.3□□□□□ -0.92
NECTIN1-202ENST00000340882 LINC00167Q96N53 147 aa9.3□□□□□ -0.92
NECTIN1-202ENST00000340882 TP73-AS1Q9UF72 201 aa9.3□□□□□ -0.92
NECTIN1-202ENST00000340882 PPP1R17O96001 155 aa9.29□□□□□ -0.92
NECTIN1-202ENST00000340882 KRTAP13-3Q3SY46 172 aa9.29□□□□□ -0.92
NECTIN1-202ENST00000340882 IGKV2D-26A0A0A0MRZ7 120 aa9.27□□□□□ -0.93
NECTIN1-202ENST00000340882 GAGE10A6NGK3 116 aa9.27□□□□□ -0.93
NECTIN1-202ENST00000340882 TCAPO15273 167 aa9.27□□□□□ -0.93
NECTIN1-202ENST00000340882 C20orf78Q9BR46 151 aa9.27□□□□□ -0.93
NECTIN1-202ENST00000340882 TRBV24-1A0A075B6N3 115 aa9.26□□□□□ -0.93
NECTIN1-202ENST00000340882 A0A1B0GVG6 124 aa9.26□□□□□ -0.93
NECTIN1-202ENST00000340882 RPL32P62910 135 aaKnown RBP9.26□□□□□ -0.93
NECTIN1-202ENST00000340882 RGS21Q2M5E4 152 aa9.26□□□□□ -0.93
NECTIN1-202ENST00000340882 ZC2HC1BQ5TFG8 222 aa9.26□□□□□ -0.93
NECTIN1-202ENST00000340882 FAM104BQ5XKR9 115 aa9.26□□□□□ -0.93
NECTIN1-202ENST00000340882 C3orf22Q8N5N4 141 aa9.26□□□□□ -0.93
NECTIN1-202ENST00000340882 SMIM2Q9BVW6 85 aa9.26□□□□□ -0.93
NECTIN1-202ENST00000340882 TOMM7Q9P0U1 55 aa9.26□□□□□ -0.93
NECTIN1-202ENST00000340882 IGLV4-3A0A075B6K6 122 aa9.25□□□□□ -0.93
NECTIN1-202ENST00000340882 TNFRSF6BO95407 300 aa9.25□□□□□ -0.93
NECTIN1-202ENST00000340882 RIGQ13278 110 aa9.25□□□□□ -0.93
NECTIN1-202ENST00000340882 LINC00337Q8N6G1 96 aa9.25□□□□□ -0.93
NECTIN1-202ENST00000340882 TAGLN2P37802 199 aaKnown RBP9.24□□□□□ -0.93
NECTIN1-202ENST00000340882 UBE2AP49459 152 aa9.24□□□□□ -0.93
NECTIN1-202ENST00000340882 CTAG1AP78358 180 aa9.24□□□□□ -0.93
NECTIN1-202ENST00000340882 TMEM250H0YL14 139 aa9.23□□□□□ -0.93
NECTIN1-202ENST00000340882 CEBPGP53567 150 aa9.23□□□□□ -0.93
NECTIN1-202ENST00000340882 CKS1BP61024 79 aa9.23□□□□□ -0.93
NECTIN1-202ENST00000340882 KRTAP19-2Q3LHN2 52 aa9.23□□□□□ -0.93
NECTIN1-202ENST00000340882 LINC01551Q86U37 167 aa9.23□□□□□ -0.93
NECTIN1-202ENST00000340882 LINC01561Q8N1V8 128 aa9.23□□□□□ -0.93
NECTIN1-202ENST00000340882 V9GYV3 84 aa9.23□□□□□ -0.93
NECTIN1-202ENST00000340882 PRSS2P07478 247 aa9.22□□□□□ -0.93
NECTIN1-202ENST00000340882 CKS2P33552 79 aa9.22□□□□□ -0.93
NECTIN1-202ENST00000340882 C6orf226Q5I0X4 101 aa9.22□□□□□ -0.93
NECTIN1-202ENST00000340882 OSTCQ9NRP0 149 aa9.22□□□□□ -0.93
NECTIN1-202ENST00000340882 LINC00862A6NCI5 91 aa9.21□□□□□ -0.94
NECTIN1-202ENST00000340882 NPYP01303 97 aa9.21□□□□□ -0.94
NECTIN1-202ENST00000340882 IFI27P40305 119 aaPredicted RBP9.21□□□□□ -0.94
NECTIN1-202ENST00000340882 PNRC1Q12796 327 aaPredicted RBP9.21□□□□□ -0.94
NECTIN1-202ENST00000340882 FP248Q71RG6 208 aaPredicted RBP9.21□□□□□ -0.94
NECTIN1-202ENST00000340882 SCO1O75880 301 aa9.2□□□□□ -0.94
NECTIN1-202ENST00000340882 MT1HP80294 61 aa9.2□□□□□ -0.94
NECTIN1-202ENST00000340882 PRLHP81277 87 aa9.2□□□□□ -0.94
NECTIN1-202ENST00000340882 Q6ZN92 141 aa9.2□□□□□ -0.94
NECTIN1-202ENST00000340882 Q8IZM0 81 aa9.2□□□□□ -0.94
NECTIN1-202ENST00000340882 TMEM141Q96I45 108 aa9.2□□□□□ -0.94
NECTIN1-202ENST00000340882 PYGO1Q9Y3Y4 419 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms