RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 RNASEKQ6P5S7 137 aaKnown RBP8.7□□□□□ -1.02
SIRPB3P-201ENST00000340424 DLEU1O43261 78 aa8.69□□□□□ -1.02
SIRPB3P-201ENST00000340424 LINC00614P0C842 121 aa8.69□□□□□ -1.02
SIRPB3P-201ENST00000340424 PET117Q6UWS5 81 aa8.69□□□□□ -1.02
SIRPB3P-201ENST00000340424 RNF185Q96GF1 192 aa8.69□□□□□ -1.02
SIRPB3P-201ENST00000340424 IGLV10-54A0A075B6I4 117 aa8.68□□□□□ -1.02
SIRPB3P-201ENST00000340424 TRBV27A0A0K0K1C4 114 aa8.68□□□□□ -1.02
SIRPB3P-201ENST00000340424 SMR3BP02814 79 aaPredicted RBP8.68□□□□□ -1.02
SIRPB3P-201ENST00000340424 HNRNPA3P51991 378 aaKnown RBP8.68□□□□□ -1.02
SIRPB3P-201ENST00000340424 AMN1Q8IY45 258 aa8.68□□□□□ -1.02
SIRPB3P-201ENST00000340424 LAMTOR2Q9Y2Q5 125 aa8.68□□□□□ -1.02
SIRPB3P-201ENST00000340424 SYS1-DBNDD2H3BUS1 97 aa8.67□□□□□ -1.02
SIRPB3P-201ENST00000340424 PRSS1P07477 247 aa8.67□□□□□ -1.02
SIRPB3P-201ENST00000340424 INAFM2P0DMQ5 153 aa8.67□□□□□ -1.02
SIRPB3P-201ENST00000340424 FGF6P10767 208 aa8.67□□□□□ -1.02
SIRPB3P-201ENST00000340424 POLR2KP53803 58 aaKnown RBP8.67□□□□□ -1.02
SIRPB3P-201ENST00000340424 HAMPP81172 84 aa8.67□□□□□ -1.02
SIRPB3P-201ENST00000340424 DEFB104AQ8WTQ1 72 aa8.67□□□□□ -1.02
SIRPB3P-201ENST00000340424 TMEM101Q96IK0 257 aa8.67□□□□□ -1.02
SIRPB3P-201ENST00000340424 CHAC1Q9BUX1 264 aa8.67□□□□□ -1.02
SIRPB3P-201ENST00000340424 HSPB8Q9UJY1 196 aa8.67□□□□□ -1.02
SIRPB3P-201ENST00000340424 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.66□□□□□ -1.02
SIRPB3P-201ENST00000340424 IGKV2-29A2NJV5 120 aaPredicted RBP8.66□□□□□ -1.02
SIRPB3P-201ENST00000340424 VCYO14598 125 aa8.66□□□□□ -1.02
SIRPB3P-201ENST00000340424 LEPROTL1O95214 131 aa8.66□□□□□ -1.02
SIRPB3P-201ENST00000340424 TSHBP01222 138 aa8.66□□□□□ -1.02
SIRPB3P-201ENST00000340424 CNBPP62633 177 aaKnown RBP8.66□□□□□ -1.02
SIRPB3P-201ENST00000340424 SMAGPQ0VAQ4 97 aa8.66□□□□□ -1.02
SIRPB3P-201ENST00000340424 LINC01620Q4KN68 170 aa8.66□□□□□ -1.02
SIRPB3P-201ENST00000340424 CFAP161Q6P656 301 aa8.66□□□□□ -1.02
SIRPB3P-201ENST00000340424 Q6ZN92 141 aa8.66□□□□□ -1.02
SIRPB3P-201ENST00000340424 SRRM2Q9UQ35 2752 aaKnown RBP8.66□□□□□ -1.02
SIRPB3P-201ENST00000340424 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.65□□□□□ -1.02
SIRPB3P-201ENST00000340424 PLA2G1BP04054 148 aaKnown RBP8.65□□□□□ -1.02
SIRPB3P-201ENST00000340424 SUMO2P61956 95 aaKnown RBP8.65□□□□□ -1.02
SIRPB3P-201ENST00000340424 LINC01545Q5VT33 79 aa8.65□□□□□ -1.02
SIRPB3P-201ENST00000340424 FAM104BQ5XKR9 115 aa8.65□□□□□ -1.02
SIRPB3P-201ENST00000340424 SCXQ7RTU7 201 aa8.65□□□□□ -1.02
SIRPB3P-201ENST00000340424 C9orf163Q8N9P6 203 aa8.65□□□□□ -1.02
SIRPB3P-201ENST00000340424 ORAOV1Q8WV07 137 aa8.65□□□□□ -1.02
SIRPB3P-201ENST00000340424 hDV102S1A0JD36 115 aa8.64□□□□□ -1.03
SIRPB3P-201ENST00000340424 GAS8-AS1O95177 125 aa8.64□□□□□ -1.03
SIRPB3P-201ENST00000340424 OR5A1Q8NGJ0 315 aa8.64□□□□□ -1.03
SIRPB3P-201ENST00000340424 KIR2DL4Q99706 377 aa8.64□□□□□ -1.03
SIRPB3P-201ENST00000340424 FCER1GP30273 86 aa8.63□□□□□ -1.03
SIRPB3P-201ENST00000340424 STPG4Q8N801 248 aa8.63□□□□□ -1.03
SIRPB3P-201ENST00000340424 NRACQ8N912 160 aa8.63□□□□□ -1.03
SIRPB3P-201ENST00000340424 CHCHD10Q8WYQ3 142 aaPredicted RBP8.63□□□□□ -1.03
SIRPB3P-201ENST00000340424 C20orf78Q9BR46 151 aa8.63□□□□□ -1.03
SIRPB3P-201ENST00000340424 MAP1LC3CQ9BXW4 147 aa8.63□□□□□ -1.03
SIRPB3P-201ENST00000340424 MYCBP2O75592 4640 aa8.63□□□□□ -1.03
SIRPB3P-201ENST00000340424 GAGE12HA6NDE8 117 aa8.62□□□□□ -1.03
SIRPB3P-201ENST00000340424 LINC01546A6NGU7 62 aa8.62□□□□□ -1.03
SIRPB3P-201ENST00000340424 RPL32P62910 135 aaKnown RBP8.62□□□□□ -1.03
SIRPB3P-201ENST00000340424 MRPL51Q4U2R6 128 aaKnown RBP8.62□□□□□ -1.03
SIRPB3P-201ENST00000340424 CIRBP-AS1Q8TBR5 109 aa8.62□□□□□ -1.03
SIRPB3P-201ENST00000340424 PMCHL2Q9BQD1 86 aa8.62□□□□□ -1.03
SIRPB3P-201ENST00000340424 IGKV3OR2-268A0A0C4DH90 116 aa8.61□□□□□ -1.03
SIRPB3P-201ENST00000340424 SMKR1H3BMG3 65 aa8.61□□□□□ -1.03
SIRPB3P-201ENST00000340424 PPBPP02775 128 aa8.61□□□□□ -1.03
SIRPB3P-201ENST00000340424 CKS2P33552 79 aa8.61□□□□□ -1.03
SIRPB3P-201ENST00000340424 CSDC2Q9Y534 153 aaKnown RBP8.61□□□□□ -1.03
SIRPB3P-201ENST00000340424 IGHV3-64A0A075B6Q5 118 aa8.6□□□□□ -1.03
SIRPB3P-201ENST00000340424 CCL25O15444 150 aa8.6□□□□□ -1.03
SIRPB3P-201ENST00000340424 G0S2P27469 103 aa8.6□□□□□ -1.03
SIRPB3P-201ENST00000340424 MAJINQ3KP22 176 aa8.6□□□□□ -1.03
SIRPB3P-201ENST00000340424 LINC00173Q6ZV60 143 aa8.6□□□□□ -1.03
SIRPB3P-201ENST00000340424 FA2HQ7L5A8 372 aa8.6□□□□□ -1.03
SIRPB3P-201ENST00000340424 ATOH7Q8N100 152 aa8.6□□□□□ -1.03
SIRPB3P-201ENST00000340424 CDC42SE2Q9NRR3 84 aa8.6□□□□□ -1.03
SIRPB3P-201ENST00000340424 LINC00959A0A1B0GUT2 108 aa8.59□□□□□ -1.03
SIRPB3P-201ENST00000340424 HSBP1L1C9JCN9 74 aa8.59□□□□□ -1.03
SIRPB3P-201ENST00000340424 SS18Q15532 418 aa8.59□□□□□ -1.03
SIRPB3P-201ENST00000340424 SLC25A34Q6PIV7 304 aa8.59□□□□□ -1.03
SIRPB3P-201ENST00000340424 SDIM1Q6ZPB5 146 aa8.59□□□□□ -1.03
SIRPB3P-201ENST00000340424 ORMDL3Q8N138 153 aa8.59□□□□□ -1.03
SIRPB3P-201ENST00000340424 C15orf56Q8N910 161 aa8.59□□□□□ -1.03
SIRPB3P-201ENST00000340424 A0A096LNJ9 63 aa8.58□□□□□ -1.04
SIRPB3P-201ENST00000340424 GVQW2A0A096LPI5 108 aaPredicted RBP8.58□□□□□ -1.04
SIRPB3P-201ENST00000340424 TNFRSF6BO95407 300 aa8.58□□□□□ -1.04
SIRPB3P-201ENST00000340424 NPSP0C0P6 89 aa8.58□□□□□ -1.04
SIRPB3P-201ENST00000340424 FOXI1Q12951 378 aa8.58□□□□□ -1.04
SIRPB3P-201ENST00000340424 BATFQ16520 125 aa8.58□□□□□ -1.04
SIRPB3P-201ENST00000340424 PRELID3AQ96N28 172 aa8.58□□□□□ -1.04
SIRPB3P-201ENST00000340424 TIMM21Q9BVV7 248 aa8.58□□□□□ -1.04
SIRPB3P-201ENST00000340424 PKIGQ9Y2B9 76 aa8.58□□□□□ -1.04
SIRPB3P-201ENST00000340424 HERC1Q15751 4861 aa8.57□□□□□ -1.04
SIRPB3P-201ENST00000340424 D6R8Y8 96 aa8.57□□□□□ -1.04
SIRPB3P-201ENST00000340424 COX8AP10176 69 aa8.57□□□□□ -1.04
SIRPB3P-201ENST00000340424 XCL1P47992 114 aa8.57□□□□□ -1.04
SIRPB3P-201ENST00000340424 CIRBPQ14011 172 aaKnown RBP8.57□□□□□ -1.04
SIRPB3P-201ENST00000340424 CD164L2Q6UWJ8 174 aa8.57□□□□□ -1.04
SIRPB3P-201ENST00000340424 PRSS3P2Q8NHM4 247 aa8.57□□□□□ -1.04
SIRPB3P-201ENST00000340424 UBE2D4Q9Y2X8 147 aa8.57□□□□□ -1.04
SIRPB3P-201ENST00000340424 IGHV1-58A0A0C4DH39 117 aa8.56□□□□□ -1.04
SIRPB3P-201ENST00000340424 PRSS47A8MTI9 375 aa8.56□□□□□ -1.04
SIRPB3P-201ENST00000340424 HBDP02042 147 aa8.56□□□□□ -1.04
SIRPB3P-201ENST00000340424 SMIM2Q9BVW6 85 aa8.56□□□□□ -1.04
SIRPB3P-201ENST00000340424 SLPIP03973 132 aa8.55□□□□□ -1.04
SIRPB3P-201ENST00000340424 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms